TomoSeq data search

Data search

Results for MligTC455_39212

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39212	26	0.55	Mlig455_032317	Neo: - Age: -		Mlig455_032317 {REF} {Length: 883} {RNA1509_17207} {RNA1310_664.1} {RNA815_31923}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_39212

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.868	0.672	1.00000	1.00000
RegionR2	2.965	0.672	0.99964	1.00000
RegionR3	0.672	0.672	1.00000	1.00000
RegionR4	-2.932	0.672	0.99956	1.00000
RegionR5	-0.6	0.672	0.99962	1.00000
RegionR6	0.153	0.672	1.00000	1.00000
RegionR7	1.178	0.672	1.00000	1.00000
RegionR8	1.432	0.672	0.99989	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	7.674	0.672	0.99962	1.00000
RegenerationR2	1.381	0.672	0.99988	1.00000
RegenerationR3	1.954	0.672	0.99989	1.00000
RegenerationR4	1.695	0.672	0.99961	1.00000
RegenerationR5	0.895	0.672	0.99977	1.00000
RegenerationR6	2.11	0.672	0.99950	1.00000
RegenerationBL	0.584	0.672	0.99977	1.00000
RegenerationTP	3.002	0.672	0.99992	1.00000

Genes with expression patterns similar to MligTC455_39212

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39212	26	0.55	Mlig455_032317	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_032317 {REF} {Length: 883} {RNA1509_17207} {RNA1310_664.1} {RNA815_31923}
2.	MligTC455_51180	590	12.29	Mlig455_012498, Mlig455_012587	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_012498 {REF} {Length: 3214} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=55.2]} {Smed: dd_Smed_v6_12193_0_1, dd_Smed_v6_12193_0_1, [RH, Score=58.2, Expect=1e-08]} {RNA1509_18736} {RNA1310_14745, RNA1509_18736} {RNA1509_18736, RNA815_5188} Mlig455_012587 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=52.3]} {Smed: dd_Smed_v6_6417_0_1, dd_Smed_v6_6417_0_1, [RH, Score=52.8, Expect=4e-07]} {RNA1509_18736} {RNA1310_14745} {RNA815_5188}
3.	MligTC455_18467	566	11.78	Mlig455_005606, Mlig455_014454, Mlig455_070392	Neo: - Age: Down-Up-Down		0.977	-	-	-	-	0.977	-	Mlig455_005606 {REF} {Length: 1420} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=32.2]; Leucine Rich repeat [PF13516.8, score=24.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.7]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [Score=48.1, Expect=5e-06]} {RNA1509_34109} {RNA1310_22549} {RNA815_9136} Mlig455_014454 {REF} {Length: 1548} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=32.2]; Leucine Rich repeat [PF13516.8, score=24.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.7]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [Score=48.1, Expect=5e-06]} {RNA1509_34109} {RNA1310_22549} {RNA815_9136} Mlig455_070392 {REF} {Length: 1549} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=31.8]; Leucine Rich repeat [PF13516.8, score=24.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.7]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [Score=48.1, Expect=5e-06]} {RNA1509_34109} {RNA1310_22549, RNA1509_34109} {RNA1509_34109, RNA815_9136}
4.	MligTC455_30760	5612	116.91	Mlig455_006073, Mlig455_011942, Mlig455_052693	Neo: - Age: logFC(26M/2M)=1.042		0.976	-	-	-	-	0.976	-	Mlig455_006073 {REF} {Length: 1112} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_011942 {REF} {Length: 1109} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200, RNA1509_21131} {RNA1310_29002, RNA1509_21131} {RNA1509_21131, RNA815_7853.1} Mlig455_052693 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_7853.1}
5.	MligTC455_30761	3551	73.99	Mlig455_039585, Mlig455_069818	Neo: - Age: Up-Up-Down		0.976	-	-	-	-	0.976	-	Mlig455_039585 {REF} {Length: 5014} {Pfam: Ammonium Transporter Family [PF00909.23, score=121.3]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=160, Expect=3e-47]} {Celegans: WBGene00000135, amt-3, Putative ammonium transporter 3, [Score=136, Expect=4e-38]} {RNA1509_11254, RNA1509_1200} {RNA1310_29002, RNA1509_11254} {RNA1509_11254, RNA815_7853.1} Mlig455_069818 {REF} {Length: 1115} {TRANSSPLICED} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
6.	MligTC455_07684	42	0.88	Mlig455_022129	Neo: - Age: -		0.974	-	-	-	-	0.974	-	Mlig455_022129 {REF} {Length: 443} {NoTransDecoderORF} {RNA1310_69626}
7.	MligTC455_30758	1926	40.12	Mlig455_000739	Neo: - Age: -		0.974	-	-	-	-	0.974	-	Mlig455_000739 {REF} {Length: 672} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_14771.2}
8.	MligTC455_30759	3803	79.23	Mlig455_007018, Mlig455_019153	Neo: - Age: Up-Down-Up, logFC(26M/2M)=5.943		0.974	-	-	-	-	0.974	-	Mlig455_007018 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_7853.1} Mlig455_019153 {REF} {Length: 1071} {TRANSSPLICED} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
9.	MligTC455_30762	5596	116.58	Mlig455_058999, Mlig455_068841, Mlig455_070941	Neo: - Age: logFC(26M/2M)=0.399		0.972	-	-	-	-	0.972	-	Mlig455_058999 {REF} {Length: 1070} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_068841 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_070941 {REF} {Length: 1067} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
10.	MligTC455_45404	78	1.63	Mlig455_001379	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.729	SLC6A5	0.97	-	-	-	-	0.970	-	Mlig455_001379 {REF} {Length: 6574} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=793.2]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=421, Expect=3e-128]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=422, Expect=7e-129]} {Dmel: FBgn0034911, CG5549, [Score=395, Expect=1e-115]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=342, Expect=2e-102]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=389, Expect=1e-119]} {RNA1509_14194} {RNA1310_1653.1} {RNA815_6812}
11.	MligTC455_43752	265	5.52	Mlig455_018054, Mlig455_018069	Neo: - Age: Down-Up-Up		0.967	-	-	-	-	0.967	-	Mlig455_018054 {REF} {Length: 1803} {RNA1509_20267} {RNA1310_4680} {RNA815_3273} Mlig455_018069 {REF} {Length: 2524} {RNA1509_20267} {RNA1310_4680} {RNA815_3273}
12.	MligTC455_30656	531	11.06	Mlig455_000273	Neo: - Age: - Region-enriched R8: 2.263/0.01198		0.965	-	-	-	-	0.965	-	Mlig455_000273 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_2996} {RNA1310_69787} {RNA815_15022}
13.	MligTC455_18050	570	11.88	Mlig455_055052	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_055052 {REF} {Length: 950} {Pfam: PLAC8 family [PF04749.19, score=73.5]; Uncharacterized protein conserved in archaea (DUF2180) [PF09947.11, score=18.7]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_44969} {RNA1310_55602} {RNA815_30798}
14.	MligTC455_09341	2563	53.4	Mlig455_040188	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_040188 {REF} {Length: 902} {RNA1509_14363} {RNA1310_45524.1} {RNA815_21772}
15.	MligTC455_37363	784	16.34	Mlig455_031870	Neo: - Age: - Region-enriched R2: 1.726/0.00342	PCM1	0.96	-	-	-	-	0.960	-	Mlig455_031870 {REF} {Length: 7459} {TRANSSPLICED} {Pfam: Pericentriolar material 1 C terminus [PF15717.7, score=227.3]} {Human: ENSG00000078674, PCM1, pericentriolar material 1, [RH, Score=213, Expect=7e-55]} {Mouse: ENSMUSG00000031592, Pcm1, pericentriolar material 1, [RH, Score=204, Expect=2e-52]} {RNA1509_20299, RNA1509_4104, RNA1509_52144} {RNA1310_2140, RNA1509_20299, RNA1509_4104, RNA1509_52144} {RNA1509_20299, RNA1509_4104, RNA1509_52144, RNA815_19842}
16.	MligTC455_31024	469	9.77	Mlig455_008666	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_008666 {REF} {Length: 399} {NoTransDecoderORF} {RNA1509_24158} {RNA1310_3578.1} {RNA815_24034}
17.	MligTC455_39355	318	6.63	Mlig455_066221	Neo: - Age: logFC(26M/2M)=-0.462		0.953	-	-	-	-	0.953	-	Mlig455_066221 {REF} {Length: 1502} {Pfam: Sleepless protein [PF17064.7, score=30.6]} {Dmel: FBgn0260499, qvr, quiver, [Score=48.1, Expect=2e-07]} {Smed: dd_Smed_v6_11379_0_1, dd_Smed_v6_11379_0_1, [RH, Score=77.4, Expect=9e-19]} {RNA1509_28973} {RNA1310_56072.1, RNA1509_28973} {RNA1509_28973, RNA815_30549}
18.	MligTC455_42630	520	10.83	Mlig455_036837, Mlig455_052975, Mlig455_053036	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.359	TBC1D2B	0.953	-	-	-	-	0.953	-	Mlig455_036837 {REF} {Length: 5744} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=169.9]; PH domain [PF00169.31, score=37.3]} {Human: ENSG00000167202, TBC1D2B, TBC1 domain family member 2B, [RH, Score=243, Expect=1e-65]} {Mouse: ENSMUSG00000037410, Tbc1d2b, TBC1 domain family, member 2B, [RH, Score=246, Expect=1e-66]} {Dmel: FBgn0038304, CG12241, [RH, Score=159, Expect=1e-39]} {Celegans: WBGene00007849, tbc-19, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=427, Expect=2e-127]} {Smed: dd_Smed_v6_2925_0_1, dd_Smed_v6_2925_0_1, [RH, Score=171, Expect=1e-43]} {RNA1509_24481} {RNA1310_3484} {RNA815_815.1} Mlig455_052975 {REF} {Length: 6364} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=169.8]; PH domain [PF00169.31, score=37.2]; WD40 repeated domain [PF19056.2, score=20.0]} {Human: ENSG00000167202, TBC1D2B, TBC1 domain family member 2B, [RH, Score=243, Expect=1e-65]} {Mouse: ENSMUSG00000037410, Tbc1d2b, TBC1 domain family, member 2B, [RH, Score=246, Expect=7e-67]} {Dmel: FBgn0038304, CG12241, [RH, Score=160, Expect=1e-39]} {Celegans: WBGene00007849, tbc-19, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=429, Expect=5e-128]} {Smed: dd_Smed_v6_2925_0_1, dd_Smed_v6_2925_0_1, [RH, Score=172, Expect=6e-44]} {RNA1509_24481} {RNA1310_3484} {RNA815_815.1} Mlig455_053036 {REF} {Length: 6120} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=167.6]; PH domain [PF00169.31, score=37.2]; WD40 repeated domain [PF19056.2, score=20.1]} {Human: ENSG00000167202, TBC1D2B, TBC1 domain family member 2B, [RH, Score=242, Expect=2e-65]} {Mouse: ENSMUSG00000037410, Tbc1d2b, TBC1 domain family, member 2B, [RH, Score=246, Expect=8e-67]} {Dmel: FBgn0038304, CG12241, [RH, Score=159, Expect=1e-39]} {Celegans: WBGene00007849, tbc-19, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=427, Expect=2e-127]} {Smed: dd_Smed_v6_2925_0_1, dd_Smed_v6_2925_0_1, [RH, Score=170, Expect=3e-43]} {RNA1509_24481} {RNA1310_3484, RNA1509_24481} {RNA1509_24481, RNA815_815.1}
19.	MligTC455_05203	626	13.05	Mlig455_063689	Neo: - Age: - Region-enriched R5: 1.244/0.00217	PPP5C	0.951	-	-	-	-	0.951	-	Mlig455_063689 {REF} {Length: 3401} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=122.4]; PPP5 TPR repeat region [PF08321.14, score=99.6]; Tetratricopeptide repeat [PF00515.30, score=40.7]; Tetratricopeptide repeat [PF07719.19, score=40.7]; Tetratricopeptide repeat [PF13428.8, score=31.9]; Tetratricopeptide repeat [PF13174.8, score=26.7]; TPR repeat [PF13414.8, score=26.4]; Tetratricopeptide repeat [PF13181.8, score=25.2]; Tetratricopeptide repeat [PF13371.8, score=19.8]; Tetratricopeptide repeat [PF13424.8, score=19.8]} {Human: ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [RH, Score=632, Expect=0.0]} {Dmel: FBgn0005777, PpD3, Protein phosphatase D3, [RH, Score=624, Expect=0.0]} {Celegans: WBGene00012665, pph-5, Serine/threonine-protein phosphatase 5, [RH, Score=582, Expect=0.0]} {Smed: dd_Smed_v6_5206_0_1, dd_Smed_v6_5206_0_1, [RH, Score=456, Expect=7e-159]} {RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274} {RNA1310_18809, RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274} {RNA1509_15200, RNA1509_49608, RNA1509_53051, RNA1509_9274, RNA815_5683}
20.	MligTC455_29274	1490	31.05	Mlig455_010337	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_010337 {REF} {Length: 4823} {TRANSSPLICED} {RNA1509_23118, RNA1509_40105} {RNA1310_26014.1, RNA1509_23118, RNA1509_40105} {RNA1509_23118, RNA1509_40105, RNA815_13372}
21.	MligTC455_06965	768	15.99	Mlig455_011672, Mlig455_011674, Mlig455_049919	Neo: - Age: Down-Up-Up	NOTCH1	0.95	-	-	-	-	0.950	-	Mlig455_011672 {REF} {Length: 815} {RNA1509_54595} {RNA1310_59282} {RNA815_18996} Mlig455_011674 {REF} {Length: 490} {NoTransDecoderORF} {RNA1509_54595} {RNA1310_59282} {RNA815_18996} Mlig455_049919 {REF} {Length: 1587} {Pfam: EGF-like domain [PF00008.29, score=27.3]; EGF-like domain [PF07974.15, score=23.4]; Human growth factor-like EGF [PF12661.9, score=19.7]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=53.9, Expect=2e-08]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=52.0, Expect=7e-08]; ENSMUSG00000026923, Notch1, notch 1, [Score=51.6, Expect=9e-08]} {Dmel: FBgn0259140, CG42255, [Score=50.4, Expect=2e-07]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=52.4, Expect=2e-08]} {RNA1509_54595} {RNA1310_59282} {RNA815_18996}
22.	MligTC455_29653	200	4.17	Mlig455_009145	Neo: - Age: logFC(26M/2M)=0.607	SETMAR	0.95	-	-	-	-	0.950	-	Mlig455_009145 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: DDE superfamily endonuclease [PF13358.8, score=32.4]; Winged helix-turn helix [PF13551.8, score=31.6]; Homeodomain-like domain [PF13384.8, score=29.0]; Bacterial regulatory proteins, lacI family [PF00356.23, score=28.5]; Helix-turn-helix domain of resolvase [PF02796.17, score=24.3]; Helix-turn-helix domain [PF13518.8, score=23.4]; Bacterial regulatory proteins, tetR family [PF00440.25, score=23.1]; Helix-turn-helix [PF01381.24, score=21.9]; Winged helix-turn-helix DNA-binding [PF13412.8, score=21.4]; MarR family [PF12802.9, score=21.3]; Sugar-specific transcriptional regulator TrmB [PF01978.21, score=21.0]; HTH DNA binding domain [PF04967.14, score=21.0]; AsnC-type helix-turn-helix domain [PF13404.8, score=20.3]; Transposase [PF01498.20, score=19.3]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=69.3, Expect=4e-14]} {RNA1509_272} {RNA1310_26410} {RNA815_12134}