M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_36487

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36487 138 2.88 Mlig455_013543

Neo: -

Age: -

 Mlig455_013543 {REF} {Length: 2784} {NoTransDecoderORF} {RNA1509_55514} {RNA1310_26481} {RNA815_10967.1}

Cumulative graph for MligTC455_36487

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.497 2.106 0.61788 1.00000
RegionR2 0.005 2.106 0.99223 1.00000
RegionR3 -2.176 2.106 0.07925 0.49854
RegionR4 -0.501 2.106 0.72318 1.00000
RegionR5 -0.389 2.106 0.71263 1.00000
RegionR6 0.28 2.106 0.77942 1.00000
RegionR7 2.315 2.106 0.02527 0.29854
RegionR8 -1.031 2.106 0.64516 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.901 2.106 0.63795 1.00000
RegenerationR2 0.805 2.106 0.41298 0.82257
RegenerationR3 1.853 2.106 0.17012 0.60508
RegenerationR4 0.602 2.106 0.61090 0.91773
RegenerationR5 0.34 2.106 0.77126 0.97954
RegenerationR6 0.413 2.106 0.71130 0.93055
RegenerationBL -0.57 2.106 0.73062 1.00000
RegenerationTP 1.347 2.106 0.37131 0.80889


Genes with expression patterns similar to MligTC455_36487

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36487 138 2.88 Mlig455_013543

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_013543 {REF} {Length: 2784} {NoTransDecoderORF} {RNA1509_55514} {RNA1310_26481} {RNA815_10967.1}
2. MligTC455_06546 182 3.78 Mlig455_045331

Neo: -

Age: -

 1.816 - - 0.856 - 0.960 - Mlig455_045331 {REF} {Length: 699} {NoTransDecoderORF} {RNA1310_37699} {RNA815_23188}
3. MligTC455_40284 142 2.97 Mlig455_045795

Neo: -

Age: -

 1.8 - - - 0.832 0.968 - Mlig455_045795 {REF} {Length: 965} {NoTransDecoderORF} {RNA1509_26792} {RNA1310_13078}
4. MligTC455_49254 528 11.01 Mlig455_039924

Neo: -

Age: logFC(26M/2M)=0.662

 MORN2 1.726 - - 0.768 - - 0.958 Mlig455_039924 {REF} {Length: 1674} {Pfam: MORN repeat [PF02493.22, score=64.6]} {Human: ENSG00000188010, MORN2, MORN repeat containing 2, [RH, Score=124, Expect=1e-36]} {Mouse: ENSMUSG00000045257, Morn2, MORN repeat containing 2, [RH, Score=126, Expect=9e-38]} {Dmel: FBgn0032478, CG5458, [Score=67.4, Expect=9e-14]} {Smed: dd_Smed_v6_6857_0_1, dd_Smed_v6_6857_0_1, [RH, Score=126, Expect=3e-38]} {RNA1509_42709} {RNA1310_23298, RNA1509_42709} {RNA1509_42709, RNA815_18336}
5. MligTC455_29122 44 0.92 Mlig455_024416

Neo: -

Age: -

Regeneration-enriched R4: 12.144
Regeneration-enriched R3: 11.972
Regeneration-enriched R5: 11.411
Regeneration-enriched R6: 11.095
Regeneration-enriched TP: 10.240
Regeneration-enriched R2: 8.714

 GRXCR1 1.707 - - - - 0.969 0.738 Mlig455_024416 {REF} {Length: 2547} {TRANSSPLICED} {Pfam: Glutaredoxin [PF00462.26, score=27.6]} {Human: ENSG00000215203, GRXCR1, glutaredoxin and cysteine rich domain containing 1, [RH, Score=112, Expect=2e-28]} {Mouse: ENSMUSG00000068082, Grxcr1, glutaredoxin, cysteine rich 1, [RH, Score=114, Expect=2e-29]} {Dmel: FBgn0051559, CG31559, [RH, Score=110, Expect=8e-27]} {RNA1509_48519} {RNA1310_27075, RNA1509_48519} {RNA1509_48519, RNA815_22070.1}
6. MligTC455_28324 96 1.99 Mlig455_008984

Neo: -

Age: -

 1.679 - - - - 0.951 0.728 Mlig455_008984 {REF} {Length: 330} {Pfam: Integrase core domain [PF00665.28, score=34.8]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=57.4, Expect=4e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
7. MligTC455_06799 162 3.38 Mlig455_031787

Neo: -

Age: -

 PRR9 0.99 - - - - 0.990 - Mlig455_031787 {REF} {Length: 3692} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=5e-07]} {RNA1509_12420} {RNA1310_87698} {RNA815_45856.1}
8. MligTC455_28156 802 16.71 Mlig455_003147, Mlig455_032425, Mlig455_034911, Mlig455_035373, Mlig455_051607, Mlig455_054980, Mlig455_057443

Neo: -

Age: -

 0.981 - - - - 0.981 -

Mlig455_003147 {REF} {Length: 967} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_39121}

Mlig455_032425 {REF} {Length: 1839} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_2198.1}

Mlig455_034911 {REF} {Length: 964} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_39121}

Mlig455_035373 {REF} {Length: 283} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_22796.1}

Mlig455_051607 {REF} {Length: 334} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.3} {RNA815_39121}

Mlig455_054980 {REF} {Length: 345} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.3} {RNA815_39121}

Mlig455_057443 {REF} {Length: 938} {NoTransDecoderORF} {RNA1509_20409} {RNA1310_17737.3} {RNA815_39121}
9. MligTC455_42582 101 2.11 Mlig455_006503

Neo: -

Age: Up-Down-Down

 MOSPD1 0.976 - - - - 0.976 - Mlig455_006503 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: MSP (Major sperm protein) domain [PF00635.28, score=49.6]} {Human: ENSG00000101928, MOSPD1, motile sperm domain containing 1, [RH, Score=93.6, Expect=1e-22]} {Mouse: ENSMUSG00000023074, Mospd1, motile sperm domain containing 1, [RH, Score=95.1, Expect=2e-23]} {RNA1509_17503} {RNA1310_37601} {RNA815_17755}
10. MligTC455_46107 48 0.99 Mlig455_059438

Neo: -

Age: -

 NEUROD1 0.972 - - - - 0.972 - Mlig455_059438 {REF} {Length: 2657} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=55.6]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [Score=64.3, Expect=9e-11]; ENSG00000123307, NEUROD4, neuronal differentiation 4, [Score=63.2, Expect=2e-10]; ENSG00000181965, NEUROG1, neurogenin 1, [Score=63.2, Expect=7e-11]; ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [Score=62.8, Expect=3e-11]; ENSG00000171532, NEUROD2, neuronal differentiation 2, [Score=61.6, Expect=9e-10]; ENSG00000168267, PTF1A, pancreas associated transcription factor 1a, [Score=61.6, Expect=6e-10]} {Mouse: ENSMUSG00000068079, Tcf15, transcription factor 15, [Score=65.1, Expect=7e-12]; ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [Score=64.3, Expect=6e-11]; ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [Score=63.5, Expect=1e-11]; ENSMUSG00000048904, Neurog1, neurogenin 1, [Score=63.2, Expect=6e-11]; ENSMUSG00000048015, Neurod4, neurogenic differentiation 4, [Score=62.4, Expect=2e-10]; ENSMUSG00000026735, Ptf1a, pancreas specific transcription factor, 1a, [Score=62.0, Expect=3e-10]} {Dmel: FBgn0037475, Fer1, 48 related 1, [Score=72.4, Expect=4e-14]} {Celegans: WBGene00001954, hlh-10, Helix Loop Helix, [RH, Score=55.5, Expect=9e-09]} {Smed: dd_Smed_v6_6869_0_1, dd_Smed_v6_6869_0_1, [RH, Score=67.4, Expect=4e-13]} {RNA1509_59553} {RNA1310_27559} {RNA815_43865.1}
11. MligTC455_35617 108 2.24 Mlig455_048363

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_048363 {REF} {Length: 5379} {RNA1310_66856}
12. MligTC455_44757 573 11.93 Mlig455_027141, Mlig455_030701

Neo: -

Age: -

 0.967 - - - - 0.967 -

Mlig455_027141 {REF} {Length: 1533} {TRANSSPLICED} {tRNA: Val(TAC),pseudo, score=29.5} {Pfam: COMM domain [PF07258.16, score=21.7]} {RNA1509_28826} {RNA1310_33598} {RNA815_23398}

Mlig455_030701 {REF} {Length: 1622} {TRANSSPLICED} {tRNA: Val(TAC),pseudo, score=29.5} {Pfam: COMM domain [PF07258.16, score=21.7]} {RNA1509_28826} {RNA1310_33598} {RNA815_23398}
13. MligTC455_37976 287 5.97 Mlig455_057731

Neo: -

Age: -

Region-enriched R2: 2.845/0.00394

 0.964 - - - - 0.964 - Mlig455_057731 {REF} {Length: 459} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_49031} {RNA1310_23076.1} {RNA815_54937}
14. MligTC455_55577 29 0.6 Mlig455_023740

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_023740 {REF} {Length: 55} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_43082}
15. MligTC455_22441 215 4.49 Mlig455_046125, Mlig455_051765

Neo: -

Age: Up-Up-Down

 0.961 - - - - 0.961 -

Mlig455_046125 {REF} {Length: 1618} {RNA1509_26358} {RNA1310_19270} {RNA815_9662}

Mlig455_051765 {REF} {Length: 4290} {RNA1509_4722} {RNA1310_655.1} {RNA815_335.1}
16. MligTC455_00706 21 0.44 Mlig455_010715

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_010715 {REF} {Length: 752}
17. MligTC455_30302 162 3.38 Mlig455_068935

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R5: 2.053/0.03938

 0.96 - - - - 0.960 - Mlig455_068935 {REF} {Length: 4558} {TRANSSPLICED} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=31.8]; Zinc knuckle [PF13696.8, score=23.3]; Zinc knuckle [PF00098.25, score=23.0]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1}
18. MligTC455_29968 40 0.83 Mlig455_061290

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_061290 {REF} {Length: 1762} {Pfam: Protein of unknown function DUF16 [PF01519.18, score=19.4]} {RNA1509_49894} {RNA1310_436.1, RNA1509_49894} {RNA1509_49894, RNA815_16288}
19. MligTC455_06924 36 0.75 Mlig455_038179

Neo: -

Age: -

Region-enriched R2: 10.576/0.00004

 0.957 - - - - 0.957 - Mlig455_038179 {REF} {Length: 2112} {NoTransDecoderORF} {RNA1310_60531} {RNA815_18496.1}
20. MligTC455_15494 299 6.23 Mlig455_003802

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_003802 {REF} {Length: 2576} {RNA1509_23541} {RNA1310_23341.1} {RNA815_11967.1}
21. MligTC455_34109 388 8.07 Mlig455_036207, Mlig455_060306, Mlig455_064034, Mlig455_064415

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.742

 NYNRIN 0.956 - - - - 0.956 -

Mlig455_036207 {REF} {Length: 2552} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.9]; Integrase zinc binding domain [PF17921.3, score=66.2]; Integrase core domain [PF00665.28, score=46.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.2]; H2C2 zinc finger [PF09337.12, score=26.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=243, Expect=9e-68]} {RNA1509_34066} {RNA1310_1125} {RNA815_16355}

Mlig455_060306 {REF} {Length: 3314} {Pfam: Integrase core domain [PF00665.28, score=45.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=68.6, Expect=6e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=66.6, Expect=2e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=149, Expect=1e-41]} {RNA1509_45628} {RNA1310_4631.1} {RNA815_1825.1}

Mlig455_064034 {REF} {Length: 907} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.0]; Integrase core domain [PF00665.28, score=41.0]; H2C2 zinc finger [PF09337.12, score=27.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=94.0, Expect=8e-22]} {RNA1310_90344}

Mlig455_064415 {REF} {Length: 9411} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.9]; Integrase zinc binding domain [PF17921.3, score=67.5]; Integrase core domain [PF00665.28, score=45.5]; H2C2 zinc finger [PF09337.12, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=22.7]; Retroviral aspartyl protease [PF00077.22, score=19.9]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=382, Expect=7e-119]} {RNA1509_34066} {RNA1310_1125} {RNA815_1825.1}
22. MligTC455_16428 191 3.99 Mlig455_001908

Neo: -

Age: logFC(26M/2M)=-0.660

Region-enriched R3: 3.721/0.00001

 0.955 - - - - 0.955 - Mlig455_001908 {REF} {Length: 2923} {RNA1509_10724, RNA1509_19015, RNA1509_58076} {RNA1310_14440, RNA1509_10724, RNA1509_58076} {RNA1509_10724, RNA1509_58076, RNA815_13456}
23. MligTC455_27026 3818 79.55 Mlig455_019327, Mlig455_019443

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_019327 {REF} {Length: 2904} {Pfam: Ets-domain [PF00178.24, score=22.7]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.7]} {RNA1509_14260} {RNA1310_17748.1, RNA1509_14260} {RNA1509_14260, RNA815_9132.1}

Mlig455_019443 {REF} {Length: 1881} {Pfam: Ets-domain [PF00178.24, score=22.1]} {RNA1509_18842} {RNA1310_17615.1} {RNA815_9132.1}
24. MligTC455_29088 121 2.52 Mlig455_018225, Mlig455_020848, Mlig455_062213

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_018225 {REF} {Length: 2763} {Pfam: Integrase core domain [PF00665.28, score=36.8]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=57.4, Expect=3e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_020848 {REF} {Length: 204} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228}

Mlig455_062213 {REF} {Length: 182} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228}
25. MligTC455_48494 599 12.48 Mlig455_014371

Neo: -

Age: Up-Down-Down

 UNC79 0.955 - - - - - 0.955 Mlig455_014371 {REF} {Length: 8900} {Pfam: Cation-channel complex subunit UNC-79 [PF14776.8, score=493.9]} {Human: ENSG00000276416, UNC79, unc-79 homolog, NALCN channel complex subunit, [RH, Score=454, Expect=5e-128]; ENSG00000133958, UNC79, unc-79 homolog, NALCN channel complex subunit, [RH, Score=454, Expect=5e-128]} {Mouse: ENSMUSG00000021198, Unc79, unc-79 homolog, [RH, Score=456, Expect=1e-128]} {Dmel: FBgn0038693, unc79, uncoordinated 79, [RH, Score=475, Expect=1e-134]} {Celegans: WBGene00006811, unc-79, Uncoordinated protein 79, [RH, Score=350, Expect=1e-96]} {Smed: dd_Smed_v6_6600_0_15, dd_Smed_v6_6600_0_15, [RH, Score=584, Expect=6e-170]} {RNA1509_10593} {RNA1310_930.1} {RNA815_1785.1}
26. MligTC455_12279 12 0.26 Mlig455_067981

Neo: Int S/G2/M

Age: -

 0.954 - - - - 0.954 - Mlig455_067981 {REF} {Length: 506} {NoTransDecoderORF} {RNA1310_57536}
27. MligTC455_22307 116 2.42 Mlig455_068765

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R2: 8.515/0.00025
Region-enriched R6: 5.329/0.02181

 CDK7 0.954 - - - - 0.954 - Mlig455_068765 {REF} {Length: 2368} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=93.0]; Haspin like kinase domain [PF12330.10, score=18.3]} {Human: ENSG00000134058, CDK7, cyclin dependent kinase 7, [RH, Score=364, Expect=6e-125]; ENSG00000277273, CDK7, cyclin dependent kinase 7, [RH, Score=364, Expect=6e-125]} {Mouse: ENSMUSG00000069089, Cdk7, cyclin-dependent kinase 7, [RH, Score=357, Expect=5e-122]} {Dmel: FBgn0263237, Cdk7, Cyclin-dependent kinase 7, [RH, Score=359, Expect=3e-123]} {Celegans: WBGene00000408, cdk-7, Cyclin-dependent kinase 7, [RH, Score=337, Expect=5e-115]} {Smed: dd_Smed_v6_8614_0_1, dd_Smed_v6_8614_0_1, [RH, Score=333, Expect=2e-113]} {RNA1509_19653} {RNA1310_23923} {RNA815_10258}
28. MligTC455_28278 110 2.28 Mlig455_018484

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_018484 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
29. MligTC455_53015 462 9.61 Mlig455_046085, Mlig455_046710, Mlig455_047061

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_046085 {REF} {Length: 90} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52245} {RNA1310_76980} {RNA815_21429.1}

Mlig455_046710 {REF} {Length: 707} {TRANSSPLICED} {RNA1509_35561} {RNA1310_52621} {RNA815_21429.1}

Mlig455_047061 {REF} {Length: 580} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35561} {RNA1310_61780} {RNA815_35137}
30. MligTC455_45147 83 1.72 Mlig455_030535

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_030535 {REF} {Length: 2558} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=23.2]} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=92.0, Expect=8e-22]} {RNA1509_45032} {RNA1310_21981} {RNA815_16677}
31. MligTC455_50319 55 1.14 Mlig455_028874

Neo: -

Age: logFC(26M/2M)=-0.326

 TPM1 0.952 - - - - 0.952 - Mlig455_028874 {REF} {Length: 2123} {Pfam: Tropomyosin [PF00261.22, score=101.6]; Tropomyosin like [PF12718.9, score=32.3]; Crescentin protein [PF19220.2, score=30.1]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=68.9, Expect=3e-13]; ENSG00000167460, TPM4, tropomyosin 4, [Score=68.2, Expect=5e-13]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=69.3, Expect=2e-13]; ENSMUSG00000031799, Tpm4, tropomyosin 4, [Score=68.9, Expect=2e-13]} {Dmel: FBgn0003721, Tm1, Tropomyosin 1, [Score=79.3, Expect=3e-17]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=78.6, Expect=4e-17]} {Smed: dd_Smed_v6_405_0_1, dd_Smed_v6_405_0_1, [Score=65.1, Expect=3e-12]} {RNA1509_21869, RNA1509_28996, RNA1509_56934} {RNA1310_14612.1, RNA1509_21869, RNA1509_28996, RNA1509_56934} {RNA1509_21869, RNA1509_28996, RNA1509_56934, RNA815_9032}
32. MligTC455_15672 59 1.23 Mlig455_049330

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_049330 {REF} {Length: 766} {RNA1509_2125} {RNA1310_5057.1} {RNA815_436}
33. MligTC455_27603 289 6.03 Mlig455_014807, Mlig455_014808, Mlig455_048371, Mlig455_048373, Mlig455_048375

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_014807 {REF} {Length: 1619} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.0]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.6]} {RNA1509_27898} {RNA1310_75837} {RNA815_25662}

Mlig455_014808 {REF} {Length: 3501} {NoTransDecoderORF} {RNA1509_36395} {RNA1310_35929, RNA1509_36395} {RNA1509_36395, RNA815_23270}

Mlig455_048371 {REF} {Length: 6706} {RNA1509_36395} {RNA1310_2280.1} {RNA815_694.1}

Mlig455_048373 {REF} {Length: 1586} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.5]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.3]} {RNA1509_27898} {RNA1310_75837} {RNA815_25662}

Mlig455_048375 {REF} {Length: 1628} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.5]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.3]} {RNA1509_27898} {RNA1310_75837} {RNA815_25662}
34. MligTC455_07616 35 0.72 Mlig455_065059

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_065059 {REF} {Length: 1111} {TRANSSPLICED} {RNA1509_11880} {RNA1310_57329} {RNA815_53141}
35. MligTC455_40134 396 8.25 Mlig455_003061, Mlig455_003267

Neo: Int S/G2/M

Age: -

 0.95 - - - - 0.950 -

Mlig455_003061 {REF} {Length: 2554} {Pfam: WD domain, G-beta repeat [PF00400.34, score=27.5]} {RNA1509_32538, RNA1509_54728} {RNA1310_22220, RNA1509_32538, RNA1509_54728} {RNA1509_32538, RNA1509_54728, RNA815_9624}

Mlig455_003267 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.3]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=48.9, Expect=4e-06]} {RNA1509_32538} {RNA1310_22220} {RNA815_9624}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA