Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_07600 | 29 | 0.60 | Mlig455_060595 | Neo: - Age: - |
Mlig455_060595 {REF} {Length: 660} {NoTransDecoderORF} {RNA1310_91888} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.731 | 0.78 | 1.00000 | 1.00000 | |
RegionR2 | 2.557 | 0.78 | 1.00000 | 1.00000 | |
RegionR3 | 0.521 | 0.78 | 0.99957 | 1.00000 | |
RegionR4 | -2.28 | 0.78 | 1.00000 | 1.00000 | |
RegionR5 | -0.434 | 0.78 | 1.00000 | 1.00000 | |
RegionR6 | 0.526 | 0.78 | 0.99964 | 1.00000 | |
RegionR7 | 0.888 | 0.78 | 1.00000 | 1.00000 | |
RegionR8 | 0.953 | 0.78 | 1.00000 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 3.038 | 0.78 | 0.99969 | 1.00000 | |
RegenerationR2 | 3.956 | 0.78 | 0.08828 | 0.47624 | |
RegenerationR3 | 4.468 | 0.78 | 0.07147 | 0.44749 | |
RegenerationR4 | 2.961 | 0.78 | 0.08316 | 0.45626 | |
RegenerationR5 | 4.069 | 0.78 | 0.06541 | 0.40245 | |
RegenerationR6 | 2.562 | 0.78 | 0.13876 | 0.45673 | |
RegenerationBL | 5.449 | 0.78 | 0.02750 | 0.18376 | |
RegenerationTP | 2.682 | 0.78 | 0.18280 | 0.61905 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_07600 | 29 | 0.6 | Mlig455_060595 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_060595 {REF} {Length: 660} {NoTransDecoderORF} {RNA1310_91888} | |
2. | MligTC455_00715 | 24 | 0.51 | Mlig455_060639 | Neo: - Age: - |
1.906 | - | - | - | - | 0.910 | 0.996 | Mlig455_060639 {REF} {Length: 802} {NoTransDecoderORF} {RNA1509_54585} {RNA1310_91888} {RNA815_7856.1} | |
3. | MligTC455_52693 | 53 | 1.09 | Mlig455_010844 | Neo: - Age: - |
1.812 | - | - | - | - | 0.842 | 0.970 | Mlig455_010844 {REF} {Length: 2348} {NoTransDecoderORF} {RNA1310_45390} {RNA815_62908} | |
4. | MligTC455_14961 | 39 | 0.82 | Mlig455_048867 | Neo: - Age: - |
1.785 | - | - | - | - | 0.823 | 0.962 | Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124} | |
5. | MligTC455_24621 | 43 | 0.9 | Mlig455_034366 | Neo: - Age: - |
1.775 | - | - | - | - | 0.818 | 0.957 | Mlig455_034366 {REF} {Length: 575} {NoTransDecoderORF} | |
6. | MligTC455_30255 | 132 | 2.75 | Mlig455_011743 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.728/0.02036 |
1.761 | - | - | - | - | 0.804 | 0.957 | Mlig455_011743 {REF} {Length: 945} {TRANSSPLICED} {RNA1509_16349} {RNA1310_2575} {RNA815_54759} | |
7. | MligTC455_11319 | 34 | 0.7 | Mlig455_054806 | Neo: - Age: - |
1.746 | - | - | - | - | 0.782 | 0.964 | Mlig455_054806 {REF} {Length: 275} {NoTransDecoderORF} | |
8. | MligTC455_01710 | 41 | 0.85 | Mlig455_013827 | Neo: - Age: - |
0.985 | - | - | - | - | - | 0.985 | Mlig455_013827 {REF} {Length: 2546} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=29.2]} {RNA1310_100507} {RNA815_49026} | |
9. | MligTC455_29577 | 55 | 1.15 | Mlig455_034332, Mlig455_043861 | Neo: - Age: - Region-enriched R2: 5.585/0.04648 |
0.974 | - | - | - | - | - | 0.974 | Mlig455_034332 {REF} {Length: 462} {NoTransDecoderORF} {RNA1509_44226} {RNA1310_127890} {RNA815_19744} Mlig455_043861 {REF} {Length: 1191} {RNA1509_44226} {RNA1310_46029} {RNA815_931} |
|
10. | MligTC455_31215 | 39 | 0.8 | Mlig455_001130 | Neo: - Age: - Regeneration-upregulated R5: 6.163 Regeneration-enriched R5: 6.163 |
0.973 | - | - | - | - | - | 0.973 | Mlig455_001130 {REF} {Length: 3151} {RNA1310_23510} {RNA815_21831} | |
11. | MligTC455_28153 | 87 | 1.82 | Mlig455_023355 | Neo: - Age: Down-Up-Down |
0.972 | - | - | - | - | - | 0.972 | Mlig455_023355 {REF} {Length: 2641} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=23.0]} {RNA1509_36436} {RNA1310_24275.2} {RNA815_11419.1} | |
12. | MligTC455_28578 | 696 | 14.49 | Mlig455_006979 | Neo: - Age: - |
REL | 0.972 | - | - | - | - | 0.972 | - | Mlig455_006979 {REF} {Length: 3712} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=107.5]} {Human: ENSG00000162924, REL, REL proto-oncogene, NF-kB subunit, [Score=54.7, Expect=5e-07]} {Mouse: ENSMUSG00000024927, Rela, v-rel reticuloendotheliosis viral oncogene homolog A (avian), [Score=55.8, Expect=1e-07]} {RNA1509_2844} {RNA1310_9566} {RNA815_4513} |
13. | MligTC455_16579 | 192 | 4 | Mlig455_002494 | Neo: - Age: logFC(26M/2M)=0.292 |
0.969 | - | - | - | - | - | 0.969 | Mlig455_002494 {REF} {Length: 4108} {Mouse: ENSMUSG00000020154, Ptprb, protein tyrosine phosphatase, receptor type, B, [Score=55.8, Expect=3e-07]} {RNA1509_28509} {RNA1310_14831.1} {RNA815_5519.1} | |
14. | MligTC455_47089 | 141 | 2.95 | Mlig455_044898 | Neo: Irradiation Age: - |
CSNK2A2 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_044898 {REF} {Length: 2031} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=158.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=53.4]} {Human: ENSG00000070770, CSNK2A2, casein kinase 2 alpha 2, [Score=116, Expect=8e-29]; ENSG00000254598, CSNK2A3, casein kinase 2 alpha 3, [Score=113, Expect=2e-27]; ENSG00000101266, CSNK2A1, casein kinase 2 alpha 1, [Score=112, Expect=3e-27]} {Mouse: ENSMUSG00000046707, Csnk2a2, casein kinase 2, alpha prime polypeptide, [Score=115, Expect=8e-29]; ENSMUSG00000074698, Csnk2a1, casein kinase 2, alpha 1 polypeptide, [Score=112, Expect=3e-27]; ENSMUSG00000101523, Gm10031, predicted pseudogene 10031, [Score=112, Expect=3e-27]} {Dmel: FBgn0264492, CkIIalpha, casein kinase IIalpha, [Score=112, Expect=9e-28]} {Celegans: WBGene00016421, cdc-7, Cell Division Cycle related, [RH, Score=103, Expect=3e-24]} {Smed: dd_Smed_v6_16034_0_1, dd_Smed_v6_16034_0_1, [RH, Score=204, Expect=5e-62]} {RNA1509_42628} {RNA1310_28036.1} {RNA815_26786} |
15. | MligTC455_28586 | 32 | 0.66 | Mlig455_032084 | Neo: - Age: Up-Down-Down |
0.968 | - | - | - | - | - | 0.968 | Mlig455_032084 {REF} {Length: 7595} {RNA1509_42521, RNA1509_44223, RNA1509_46209} {RNA1310_31499, RNA1509_42521, RNA1509_46209} {RNA1509_42521, RNA1509_46209, RNA815_19070} | |
16. | MligTC455_00945 | 17 | 0.34 | Mlig455_060622 | Neo: - Age: - Regeneration-upregulated R5: 5.699 Regeneration-enriched R5: 5.699 |
0.967 | - | - | - | - | - | 0.967 | Mlig455_060622 {REF} {Length: 889} | |
17. | MligTC455_09724 | 48 | 1.01 | Mlig455_009261 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_009261 {REF} {Length: 1012} {NoTransDecoderORF} | |
18. | MligTC455_33101 | 89 | 1.85 | Mlig455_064071, Mlig455_064992 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_064071 {REF} {Length: 3613} {RNA1509_56890} {RNA1310_43571.1} {RNA815_52616} Mlig455_064992 {REF} {Length: 2928} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_43571.1} {RNA815_52616} |
|
19. | MligTC455_11444 | 25 | 0.53 | Mlig455_066854 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_066854 {REF} {Length: 845} {NoTransDecoderORF} {RNA1310_141915} | |
20. | MligTC455_27846 | 65 | 1.35 | Mlig455_062268 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_062268 {REF} {Length: 6610} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_20493} {RNA1310_131.1} {RNA815_52.1} | |
21. | MligTC455_08498 | 26 | 0.55 | Mlig455_053380 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_053380 {REF} {Length: 962} {NoTransDecoderORF} {RNA1310_91082} | |
22. | MligTC455_30270 | 406 | 8.46 | Mlig455_012719, Mlig455_044289 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 4.823 Regeneration-enriched BL: 4.823 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_012719 {REF} {Length: 392} {RNA1509_16349} {RNA1310_2575} Mlig455_044289 {REF} {Length: 4784} {RNA1509_16349} {RNA1310_2575} {RNA815_3500.1} |
|
23. | MligTC455_55942 | 14 | 0.3 | Mlig455_007077 | Neo: - Age: - Region-enriched R4: 2.980/0.03313 |
0.957 | - | - | - | - | 0.957 | - | Mlig455_007077 {REF} {Length: 422} {NoTransDecoderORF} | |
24. | MligTC455_21763 | 173 | 3.61 | Mlig455_048540, Mlig455_053321 | Neo: - Age: - Region-enriched R4: 5.363/0.02880 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_048540 {REF} {Length: 1277} {NoTransDecoderORF} {RNA1509_52731} {RNA1310_42960} {RNA815_343.1} Mlig455_053321 {REF} {Length: 1356} {NoTransDecoderORF} {RNA1509_52731} {RNA1310_42960} {RNA815_343.1} |
|
25. | MligTC455_27802 | 89 | 1.86 | Mlig455_057249 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_057249 {REF} {Length: 8422} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=129.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.3]; Integrase zinc binding domain [PF17921.3, score=71.9]; Integrase core domain [PF00665.28, score=47.6]; Aspartyl protease [PF13650.8, score=39.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.0]; Retroviral aspartyl protease [PF00077.22, score=28.6]; Aspartyl protease [PF09668.12, score=23.4]; Putative peptidase (DUF1758) [PF05585.14, score=22.5]; Retroviral aspartyl protease [PF08284.13, score=19.6]; DDE superfamily endonuclease [PF13358.8, score=19.1]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=342, Expect=8e-103]} {RNA1509_28802} {RNA1310_131.1} {RNA815_52.1} | |
26. | MligTC455_42882 | 1121 | 23.35 | Mlig455_018334 | Neo: - Age: - |
EEF2K | 0.956 | - | - | - | - | 0.956 | - | Mlig455_018334 {REF} {Length: 4963} {Pfam: Alpha-kinase family [PF02816.20, score=188.2]} {Human: ENSG00000103319, EEF2K, eukaryotic elongation factor 2 kinase, [Score=422, Expect=2e-135]; ENSG00000284161, EEF2K, eukaryotic elongation factor 2 kinase, [Score=420, Expect=1e-134]} {Mouse: ENSMUSG00000035064, Eef2k, eukaryotic elongation factor-2 kinase, [Score=416, Expect=8e-133]} {Celegans: WBGene00001160, efk-1, Eukaryotic elongation factor 2 kinase, [RH, Score=320, Expect=1e-96]} {Smed: dd_Smed_v6_9576_0_1, dd_Smed_v6_9576_0_1, [Score=401, Expect=3e-130]} {RNA1509_1554} {RNA1310_5135.1} {RNA815_1164.1} |
27. | MligTC455_14517 | 21 | 0.45 | Mlig455_071167 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_071167 {REF} {Length: 785} {NoTransDecoderORF} {RNA1310_122612} | |
28. | MligTC455_32612 | 55 | 1.15 | Mlig455_015630 | Neo: - Age: - Region-enriched R2: 5.626/0.02523 |
ARX | 0.955 | - | - | - | - | - | 0.955 | Mlig455_015630 {REF} {Length: 2012} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=133, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=118, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=119, Expect=3e-33]} {RNA1310_42333.1} {RNA815_48205} |
29. | MligTC455_39057 | 57 | 1.18 | Mlig455_013966 | Neo: Int S/G2/M Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321} | |
30. | MligTC455_28151 | 69 | 1.43 | Mlig455_052923 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_052923 {REF} {Length: 885} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_34613} | |
31. | MligTC455_30249 | 100 | 2.09 | Mlig455_009659, Mlig455_048381 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_009659 {REF} {Length: 3024} {Pfam: Primase C terminal 2 (PriCT-2) [PF08707.13, score=46.3]} {RNA1509_20194} {RNA1310_3607.1} {RNA815_37227} Mlig455_048381 {REF} {Length: 832} {RNA1509_33034} {RNA1310_614.1} {RNA815_31436} |
|
32. | MligTC455_49818 | 37 | 0.78 | Mlig455_007221, Mlig455_007455 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_007221 {REF} {Length: 2050} {RNA1310_53527} {RNA815_61088} Mlig455_007455 {REF} {Length: 3769} {Mouse: ENSMUSG00000054999, Naaladl1, N-acetylated alpha-linked acidic dipeptidase-like 1, [Score=56.6, Expect=8e-08]} {RNA1310_53527} {RNA815_58531} |
|
33. | MligTC455_38597 | 42 | 0.87 | Mlig455_025025 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_025025 {REF} {Length: 836} {NoTransDecoderORF} {RNA1509_21228} {RNA1310_9218} {RNA815_7856.3} | |
34. | MligTC455_57556 | 12 | 0.25 | Mlig455_015090 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_015090 {REF} {Length: 191} {NoTransDecoderORF} | |
35. | MligTC455_33416 | 2350 | 48.96 | Mlig455_013289, Mlig455_035934 | Neo: - Age: logFC(26M/2M)=-0.185 |
KIF15 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_013289 {REF} {Length: 3175} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=179.5]; Domain of unknown function (DUF4472) [PF14739.8, score=82.3]; Microtubule binding [PF16796.7, score=46.4]} {Human: ENSG00000163808, KIF15, kinesin family member 15, [Score=137, Expect=2e-32]; ENSG00000280610, KIF15, kinesin family member 15, [Score=137, Expect=2e-32]} {Mouse: ENSMUSG00000036768, Kif15, kinesin family member 15, [Score=134, Expect=2e-31]} {Dmel: FBgn0032243, Klp31E, Kinesin-like protein at 31E, [Score=136, Expect=2e-32]} {Celegans: WBGene00002224, klp-13, Kinesin like protein KLP-13; Kinesin-like protein, [Score=116, Expect=1e-26]} {Smed: dd_Smed_v6_10482_0_1, dd_Smed_v6_10482_0_1, [RH, Score=179, Expect=1e-46]} {RNA1509_9022, RNA1509_9301} {RNA1310_2377, RNA1509_9022, RNA1509_9301} {RNA1509_9022, RNA1509_9301, RNA815_1853} Mlig455_035934 {REF} {Length: 3174} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=179.5]; Domain of unknown function (DUF4472) [PF14739.8, score=82.3]; Microtubule binding [PF16796.7, score=46.4]} {Human: ENSG00000163808, KIF15, kinesin family member 15, [Score=137, Expect=2e-32]; ENSG00000280610, KIF15, kinesin family member 15, [Score=137, Expect=2e-32]} {Mouse: ENSMUSG00000036768, Kif15, kinesin family member 15, [Score=134, Expect=2e-31]} {Dmel: FBgn0032243, Klp31E, Kinesin-like protein at 31E, [Score=136, Expect=2e-32]} {Celegans: WBGene00002224, klp-13, Kinesin like protein KLP-13; Kinesin-like protein, [Score=116, Expect=1e-26]} {Smed: dd_Smed_v6_10482_0_1, dd_Smed_v6_10482_0_1, [RH, Score=179, Expect=1e-46]} {RNA1509_9301} {RNA1310_2377} {RNA815_1853} |
36. | MligTC455_09509 | 46 | 0.95 | Mlig455_042043 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_042043 {REF} {Length: 1543} {Pfam: SICA C-terminal inner membrane domain [PF12879.9, score=63.2]} {RNA1509_50446} {RNA1310_8738.1} {RNA815_21682.1} |