M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_11444

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11444 25 0.53 Mlig455_066854

Neo: -

Age: -

 Mlig455_066854 {REF} {Length: 845} {NoTransDecoderORF} {RNA1310_141915}

Cumulative graph for MligTC455_11444

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.585 0.881 1.00000 1.00000
RegionR2 0.09 0.881 1.00000 1.00000
RegionR3 0.186 0.881 1.00000 1.00000
RegionR4 0.2 0.881 1.00000 1.00000
RegionR5 0.278 0.881 0.99998 1.00000
RegionR6 0.261 0.881 1.00000 1.00000
RegionR7 -0.103 0.881 1.00000 1.00000
RegionR8 -0.329 0.881 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.008 0.881 1.00000 1.00000
RegenerationR2 3.917 0.881 0.11869 0.53624
RegenerationR3 4.392 0.881 0.17376 0.60987
RegenerationR4 3.611 0.881 0.18333 0.62456
RegenerationR5 4.197 0.881 0.13474 0.54330
RegenerationR6 3.341 0.881 0.26463 0.61460
RegenerationBL 3.906 0.881 0.15002 0.46279
RegenerationTP 3.001 0.881 0.38632 0.81997


Genes with expression patterns similar to MligTC455_11444

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11444 25 0.53 Mlig455_066854

Neo: -

Age: -

 3 - - - 1.000 1.000 1.000 Mlig455_066854 {REF} {Length: 845} {NoTransDecoderORF} {RNA1310_141915}
2. MligTC455_19813 128 2.67 Mlig455_023194

Neo: -

Age: Down-Up-Down

 1.868 - - - - 0.954 0.914 Mlig455_023194 {REF} {Length: 614} {TRANSSPLICED} {RNA1509_45712} {RNA1310_38588.2} {RNA815_23034.1}
3. MligTC455_16579 192 4 Mlig455_002494

Neo: -

Age: logFC(26M/2M)=0.292

 1.724 - - - 0.773 - 0.951 Mlig455_002494 {REF} {Length: 4108} {Mouse: ENSMUSG00000020154, Ptprb, protein tyrosine phosphatase, receptor type, B, [Score=55.8, Expect=3e-07]} {RNA1509_28509} {RNA1310_14831.1} {RNA815_5519.1}
4. MligTC455_01552 71 1.47 Mlig455_038980

Neo: -

Age: -

 1.673 - - - - 0.722 0.951 Mlig455_038980 {REF} {Length: 991}
5. MligTC455_01654 34 0.71 Mlig455_025189

Neo: -

Age: -

 1.66 - - - - 0.710 0.950 Mlig455_025189 {REF} {Length: 577} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_76847} {RNA815_29511.2}
6. MligTC455_49527 147 3.06 Mlig455_027843

Neo: -

Age: -

 0.993 - - - - - 0.993 Mlig455_027843 {REF} {Length: 1796} {RNA1509_15103} {RNA1310_101911} {RNA815_59080}
7. MligTC455_50390 19 0.4 Mlig455_016912

Neo: -

Age: -

 CHRNA3 0.99 - - - - - 0.990 Mlig455_016912 {REF} {Length: 2944} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=242.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=157.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=326, Expect=7e-105]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=317, Expect=2e-101]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=317, Expect=2e-101]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=313, Expect=5e-100]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=320, Expect=8e-103]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=317, Expect=1e-101]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=315, Expect=2e-101]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=304, Expect=8e-97]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=347, Expect=1e-112]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [RH, Score=307, Expect=1e-98]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [RH, Score=539, Expect=0.0]} {RNA1310_33221} {RNA815_23594.2}
8. MligTC455_26668 406 8.46 Mlig455_011365

Neo: -

Age: -

Regeneration-upregulated BL: 6.270

Regeneration-enriched BL: 6.270

 0.987 - - - - - 0.987 Mlig455_011365 {REF} {Length: 3699} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=20.7]} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857}
9. MligTC455_24621 43 0.9 Mlig455_034366

Neo: -

Age: -

 0.986 - - - - - 0.986 Mlig455_034366 {REF} {Length: 575} {NoTransDecoderORF}
10. MligTC455_42418 64 1.33 Mlig455_063557

Neo: -

Age: -

 SCNN1G 0.984 - - - - - 0.984 Mlig455_063557 {REF} {Length: 3686} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=197.1]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=75.5, Expect=1e-13]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=53.9, Expect=4e-07]; ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=52.0, Expect=1e-06]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=56.6, Expect=3e-08]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=318, Expect=6e-101]} {RNA1310_46167} {RNA815_32816}
11. MligTC455_14067 223 4.65 Mlig455_069308

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_069308 {REF} {Length: 1219} {NoTransDecoderORF}
12. MligTC455_21557 17 0.35 Mlig455_015278

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_015278 {REF} {Length: 738} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}
13. MligTC455_27802 89 1.86 Mlig455_057249

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_057249 {REF} {Length: 8422} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=129.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.3]; Integrase zinc binding domain [PF17921.3, score=71.9]; Integrase core domain [PF00665.28, score=47.6]; Aspartyl protease [PF13650.8, score=39.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.0]; Retroviral aspartyl protease [PF00077.22, score=28.6]; Aspartyl protease [PF09668.12, score=23.4]; Putative peptidase (DUF1758) [PF05585.14, score=22.5]; Retroviral aspartyl protease [PF08284.13, score=19.6]; DDE superfamily endonuclease [PF13358.8, score=19.1]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=342, Expect=8e-103]} {RNA1509_28802} {RNA1310_131.1} {RNA815_52.1}
14. MligTC455_08216 34 0.7 Mlig455_009138

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_009138 {REF} {Length: 379} {NoTransDecoderORF} {RNA1310_66482.1} {RNA815_62564}
15. MligTC455_08498 26 0.55 Mlig455_053380

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_053380 {REF} {Length: 962} {NoTransDecoderORF} {RNA1310_91082}
16. MligTC455_18401 44 0.92 Mlig455_060625

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_060625 {REF} {Length: 2190} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_33283} {RNA815_55541}
17. MligTC455_30270 406 8.46 Mlig455_012719, Mlig455_044289

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 4.823

Regeneration-enriched BL: 4.823

 0.976 - - - - - 0.976

Mlig455_012719 {REF} {Length: 392} {RNA1509_16349} {RNA1310_2575}

Mlig455_044289 {REF} {Length: 4784} {RNA1509_16349} {RNA1310_2575} {RNA815_3500.1}
18. MligTC455_28153 87 1.82 Mlig455_023355

Neo: -

Age: Down-Up-Down

 0.975 - - - - - 0.975 Mlig455_023355 {REF} {Length: 2641} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=23.0]} {RNA1509_36436} {RNA1310_24275.2} {RNA815_11419.1}
19. MligTC455_39057 57 1.18 Mlig455_013966

Neo: Int S/G2/M

Age: -

 0.974 - - - - - 0.974 Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321}
20. MligTC455_14961 39 0.82 Mlig455_048867

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
21. MligTC455_28586 32 0.66 Mlig455_032084

Neo: -

Age: Up-Down-Down

 0.97 - - - - - 0.970 Mlig455_032084 {REF} {Length: 7595} {RNA1509_42521, RNA1509_44223, RNA1509_46209} {RNA1310_31499, RNA1509_42521, RNA1509_46209} {RNA1509_42521, RNA1509_46209, RNA815_19070}
22. MligTC455_00715 24 0.51 Mlig455_060639

Neo: -

Age: -

 0.969 - - - - - 0.969 Mlig455_060639 {REF} {Length: 802} {NoTransDecoderORF} {RNA1509_54585} {RNA1310_91888} {RNA815_7856.1}
23. MligTC455_06484 46 0.96 Mlig455_061537

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_061537 {REF} {Length: 542} {NoTransDecoderORF} {RNA1310_116180}
24. MligTC455_06814 49 1.02 Mlig455_046899

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_046899 {REF} {Length: 337}
25. MligTC455_11319 34 0.7 Mlig455_054806

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_054806 {REF} {Length: 275} {NoTransDecoderORF}
26. MligTC455_19712 82 1.7 Mlig455_000384

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_000384 {REF} {Length: 1367} {NoTransDecoderORF} {RNA1310_88029.2} {RNA815_48482}
27. MligTC455_40301 60 1.25 Mlig455_059819

Neo: Germline

Age: -

Region-enriched R5: 2.754/0.03368

 SLC7A4 0.967 - - - - 0.967 - Mlig455_059819 {REF} {Length: 2892} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=130.5]; Amino acid permease [PF00324.23, score=113.8]; C-terminus of AA_permease [PF13906.8, score=49.6]} {Human: ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=297, Expect=1e-91]; ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=297, Expect=9e-92]; ENSG00000003989, SLC7A2, solute carrier family 7 member 2, [Score=293, Expect=7e-90]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=313, Expect=9e-98]; ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=298, Expect=5e-92]} {Dmel: FBgn0036984, CG13248, [Score=318, Expect=2e-99]} {Celegans: WBGene00016806, C50D2.2, [Score=308, Expect=1e-96]} {Smed: dd_Smed_v6_8652_0_1, dd_Smed_v6_8652_0_1, [RH, Score=437, Expect=7e-147]} {RNA1509_27541, RNA1509_46996, RNA1509_59721} {RNA1310_12433.1, RNA1509_46996, RNA1509_59721} {RNA1509_46996, RNA1509_59721, RNA815_12203}
28. MligTC455_08889 26 0.54 Mlig455_054256

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_054256 {REF} {Length: 1360} {NoTransDecoderORF} {RNA1509_50721} {RNA1310_33163} {RNA815_21535}
29. MligTC455_31863 390 8.13 Mlig455_007159

Neo: -

Age: Up-Down-Up

Regeneration-upregulated BL: 5.272

Regeneration-enriched BL: 5.272

 PPP2R3C 0.966 - - - - - 0.966 Mlig455_007159 {REF} {Length: 7241} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=29.1]; EF-hand domain pair [PF13499.8, score=28.1]; EF hand [PF00036.34, score=19.1]} {Human: ENSG00000092020, PPP2R3C, protein phosphatase 2 regulatory subunit B''gamma, [Score=416, Expect=4e-142]} {Mouse: ENSMUSG00000021022, Ppp2r3c, protein phosphatase 2, regulatory subunit B'', gamma, [Score=418, Expect=3e-143]} {Dmel: FBgn0038744, CG4733, [Score=98.2, Expect=2e-21]} {Smed: dd_Smed_v6_10614_0_1, dd_Smed_v6_10614_0_1, [Score=397, Expect=8e-136]} {RNA1509_34380} {RNA1310_18272} {RNA815_7249}
30. MligTC455_32142 40 0.84 Mlig455_006350

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.521

 TRPM7 0.965 - - - - - 0.965 Mlig455_006350 {REF} {Length: 5802} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=55.9]; Ankyrin repeats (3 copies) [PF12796.9, score=45.8]; Ankyrin repeat [PF13606.8, score=32.5]; Ankyrin repeats (many copies) [PF13857.8, score=28.5]; Ankyrin repeat [PF00023.32, score=25.7]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=104, Expect=1e-21]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=102, Expect=6e-21]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=99.4, Expect=4e-20]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=99.4, Expect=3e-20]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=104, Expect=7e-22]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=103, Expect=1e-21]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=103, Expect=1e-21]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=92.4, Expect=2e-18]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=77.8, Expect=5e-14]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=120, Expect=1e-27]} {RNA1509_29775} {RNA1310_1317} {RNA815_8567}
31. MligTC455_49818 37 0.78 Mlig455_007221, Mlig455_007455

Neo: -

Age: -

 0.965 - - - - - 0.965

Mlig455_007221 {REF} {Length: 2050} {RNA1310_53527} {RNA815_61088}

Mlig455_007455 {REF} {Length: 3769} {Mouse: ENSMUSG00000054999, Naaladl1, N-acetylated alpha-linked acidic dipeptidase-like 1, [Score=56.6, Expect=8e-08]} {RNA1310_53527} {RNA815_58531}
32. MligTC455_31201 73 1.53 Mlig455_045851, Mlig455_045867

Neo: -

Age: Up-Down-Up

 LRRC9 0.964 - - - - - 0.964

Mlig455_045851 {REF} {Length: 5484} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=159.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=149.6]; Leucine rich repeat [PF13855.8, score=111.6]} {Human: ENSG00000131951, LRRC9, leucine rich repeat containing 9, [RH, Score=437, Expect=1e-129]} {Mouse: ENSMUSG00000021090, Lrrc9, leucine rich repeat containing 9, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0039728, CG7896, [Score=73.6, Expect=1e-12]} {Celegans: WBGene00020266, T05H4.3, [RH, Score=80.1, Expect=7e-15]} {Smed: dd_Smed_v6_14851_0_1, dd_Smed_v6_14851_0_1, [RH, Score=368, Expect=4e-108]} {RNA1509_22179} {RNA1310_1731, RNA1509_22179} {RNA1509_22179, RNA815_589.1}

Mlig455_045867 {REF} {Length: 5480} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=159.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=149.0]; Leucine rich repeat [PF13855.8, score=111.3]} {Human: ENSG00000131951, LRRC9, leucine rich repeat containing 9, [RH, Score=436, Expect=2e-129]} {Mouse: ENSMUSG00000021090, Lrrc9, leucine rich repeat containing 9, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0039728, CG7896, [Score=74.7, Expect=6e-13]} {Celegans: WBGene00020266, T05H4.3, [RH, Score=80.1, Expect=8e-15]} {Smed: dd_Smed_v6_14851_0_1, dd_Smed_v6_14851_0_1, [RH, Score=369, Expect=2e-108]} {RNA1509_22179} {RNA1310_1731} {RNA815_589.1}
33. MligTC455_39058 37 0.77 Mlig455_039326

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_039326 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_104321}
34. MligTC455_18942 304 6.33 Mlig455_010489, Mlig455_061891

Neo: -

Age: -

Region-enriched R4: 2.841/0.02022

 0.963 - - - - - 0.963

Mlig455_010489 {REF} {Length: 925} {NoTransDecoderORF} {RNA1310_38724.1} {RNA815_50423}

Mlig455_061891 {REF} {Length: 1013} {NoTransDecoderORF} {RNA1310_38724.1} {RNA815_50423}
35. MligTC455_07600 29 0.6 Mlig455_060595

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_060595 {REF} {Length: 660} {NoTransDecoderORF} {RNA1310_91888}
36. MligTC455_10321 235 4.89 Mlig455_004945, Mlig455_035629, Mlig455_055310

Neo: -

Age: -

 0.962 - - - - - 0.962

Mlig455_004945 {REF} {Length: 80} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363}

Mlig455_035629 {REF} {Length: 143} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363}

Mlig455_055310 {REF} {Length: 2978} {RNA1509_52583} {RNA1310_43983.1} {RNA815_13363}
37. MligTC455_28151 69 1.43 Mlig455_052923

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_052923 {REF} {Length: 885} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_34613}
38. MligTC455_38597 42 0.87 Mlig455_025025

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_025025 {REF} {Length: 836} {NoTransDecoderORF} {RNA1509_21228} {RNA1310_9218} {RNA815_7856.3}
39. MligTC455_48213 164 3.41 Mlig455_056285, Mlig455_056310

Neo: -

Age: -

Region-enriched R2: 5.079/0.00142

 0.96 - - - - - 0.960

Mlig455_056285 {REF} {Length: 2259} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}

Mlig455_056310 {REF} {Length: 1953} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}
40. MligTC455_49308 26 0.55 Mlig455_055283

Neo: -

Age: -

 ZAN 0.959 - - - - - 0.959 Mlig455_055283 {REF} {Length: 2486} {Pfam: Glycine rich protein [PF12810.9, score=31.8]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=65.1, Expect=4e-10]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=61.6, Expect=3e-09]} {Dmel: FBgn0053196, dpy, dumpy, [Score=51.6, Expect=3e-06]} {RNA1310_18897} {RNA815_40026}
41. MligTC455_25287 78 1.62 Mlig455_016988, Mlig455_021241, Mlig455_069255

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-2.192

 FCN2 0.958 - - - - - 0.958

Mlig455_016988 {REF} {Length: 1045} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=147.6]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=141, Expect=1e-39]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=134, Expect=1e-35]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=134, Expect=8e-36]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=133, Expect=1e-36]} {Dmel: FBgn0030163, CG1791, [RH, Score=120, Expect=9e-32]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=105, Expect=2e-25]} {RNA1310_48119} {RNA815_52558}

Mlig455_021241 {REF} {Length: 1723} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=97.3]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=104, Expect=2e-24]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=100, Expect=4e-22]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=102, Expect=8e-24]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=101, Expect=1e-22]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=99.0, Expect=5e-22]; ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=97.1, Expect=2e-21]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=97.1, Expect=3e-21]} {Dmel: FBgn0030163, CG1791, [Score=97.4, Expect=4e-22]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=88.6, Expect=1e-18]} {RNA1509_12256} {RNA1310_326} {RNA815_351.1}

Mlig455_069255 {REF} {Length: 8909} {RNA1509_33647, RNA1509_36216} {RNA1310_15325.1, RNA1509_33647, RNA1509_36216} {RNA1509_33647, RNA1509_36216, RNA815_10965}
42. MligTC455_25776 220 4.59 Mlig455_000479, Mlig455_024867

Neo: -

Age: -

 0.958 - - - - - 0.958

Mlig455_000479 {REF} {Length: 548} {Pfam: PHD-finger [PF00628.31, score=27.6]} {RNA1310_79789}

Mlig455_024867 {REF} {Length: 1776} {Pfam: PHD-finger [PF00628.31, score=25.7]} {RNA1310_46465}
43. MligTC455_24909 81 1.68 Mlig455_068894

Neo: -

Age: Up-Down-Down

 0.957 - - - - - 0.957 Mlig455_068894 {REF} {Length: 2438} {Pfam: Cadherin domain [PF00028.19, score=22.7]} {Smed: dd_Smed_v6_7807_0_1, dd_Smed_v6_7807_0_1, [Score=64.3, Expect=7e-11]} {RNA1509_42240} {RNA1310_35503} {RNA815_25856}
44. MligTC455_31325 78 1.62 Mlig455_026709, Mlig455_044580, Mlig455_050736, Mlig455_050745

Neo: -

Age: -

 0.957 - - - - - 0.957

Mlig455_026709 {REF} {Length: 5107} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.6]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=19.1]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.1, Expect=2e-12]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_044580 {REF} {Length: 2183} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.6]} {RNA1509_47056} {RNA1310_3828} {RNA815_6291.1}

Mlig455_050736 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=7e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}

Mlig455_050745 {REF} {Length: 1565} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=7e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}
45. MligTC455_42682 45 0.93 Mlig455_010400

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_010400 {REF} {Length: 1751} {NoTransDecoderORF} {RNA1509_58929} {RNA1310_128448} {RNA815_10390}
46. MligTC455_56264 21 0.44 Mlig455_057708

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_057708 {REF} {Length: 755} {RNA1509_18097} {RNA1310_18939} {RNA815_5467.1}
47. MligTC455_20478 52 1.08 Mlig455_031423

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_031423 {REF} {Length: 1562} {NoTransDecoderORF} {RNA1310_4910}
48. MligTC455_21258 64 1.34 Mlig455_001143, Mlig455_001305

Neo: -

Age: -

 FOXD4 0.956 - - - - - 0.956

Mlig455_001143 {REF} {Length: 2344} {Pfam: Forkhead domain [PF00250.20, score=125.5]} {Human: ENSG00000170122, FOXD4, forkhead box D4, [RH, Score=197, Expect=1e-57]; ENSG00000187140, FOXD3, forkhead box D3, [RH, Score=196, Expect=6e-57]} {Mouse: ENSMUSG00000067261, Foxd3, forkhead box D3, [RH, Score=197, Expect=2e-57]; ENSMUSG00000116152, Foxd3, forkhead box D3, [RH, Score=197, Expect=2e-57]} {Dmel: FBgn0004896, fd59A, forkhead domain 59A, [RH, Score=210, Expect=8e-63]} {Celegans: WBGene00006853, unc-130, [RH, Score=207, Expect=4e-63]} {Smed: dd_Smed_v6_23249_0_1, dd_Smed_v6_23249_0_1, [RH, Score=223, Expect=2e-68]} {RNA1310_116948}

Mlig455_001305 {REF} {Length: 1757} {Pfam: Forkhead domain [PF00250.20, score=51.7]} {Human: ENSG00000170122, FOXD4, forkhead box D4, [Score=99.4, Expect=3e-22]; ENSG00000187140, FOXD3, forkhead box D3, [Score=96.3, Expect=5e-21]} {Mouse: ENSMUSG00000116152, Foxd3, forkhead box D3, [Score=96.7, Expect=2e-21]; ENSMUSG00000067261, Foxd3, forkhead box D3, [Score=96.7, Expect=2e-21]} {Dmel: FBgn0004896, fd59A, forkhead domain 59A, [Score=112, Expect=6e-27]} {Celegans: WBGene00006853, unc-130, [Score=115, Expect=7e-29]} {Smed: dd_Smed_v6_23249_0_1, dd_Smed_v6_23249_0_1, [Score=124, Expect=2e-31]} {RNA1310_116948}
49. MligTC455_28129 100 2.08 Mlig455_006881

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_006881 {REF} {Length: 3777} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
50. MligTC455_28278 110 2.28 Mlig455_018484

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_018484 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
51. MligTC455_14258 34 0.71 Mlig455_050333

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_050333 {REF} {Length: 1941} {RNA1310_29786} {RNA815_30669}
52. MligTC455_14517 21 0.45 Mlig455_071167

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_071167 {REF} {Length: 785} {NoTransDecoderORF} {RNA1310_122612}
53. MligTC455_27846 65 1.35 Mlig455_062268

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_062268 {REF} {Length: 6610} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_20493} {RNA1310_131.1} {RNA815_52.1}
54. MligTC455_30255 132 2.75 Mlig455_011743

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.728/0.02036

 0.955 - - - - - 0.955 Mlig455_011743 {REF} {Length: 945} {TRANSSPLICED} {RNA1509_16349} {RNA1310_2575} {RNA815_54759}
55. MligTC455_32078 88 1.83 Mlig455_059989

Neo: -

Age: Up-Down-Down

 SSTR4 0.955 - - - - - 0.955 Mlig455_059989 {REF} {Length: 7870} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=55.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=20.5]} {Human: ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=55.8, Expect=1e-07]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=57.0, Expect=3e-08]} {RNA1509_17715} {RNA1310_22369} {RNA815_5685.1}
56. MligTC455_00419 109 2.27 Mlig455_003934

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_003934 {REF} {Length: 780} {NoTransDecoderORF} {RNA1509_46406} {RNA1310_72097} {RNA815_61152.1}
57. MligTC455_16125 254 5.28 Mlig455_018487

Neo: Int S/G2/M

Age: -

 MRPS9 0.954 - - - 0.954 - - Mlig455_018487 {REF} {Length: 2098} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=75.2]} {Human: ENSG00000135972, MRPS9, mitochondrial ribosomal protein S9, [RH, Score=218, Expect=3e-66]} {Mouse: ENSMUSG00000060679, Mrps9, mitochondrial ribosomal protein S9, [RH, Score=221, Expect=2e-67]} {Dmel: FBgn0037529, mRpS9, mitochondrial ribosomal protein S9, [RH, Score=234, Expect=9e-73]} {Celegans: WBGene00017319, mrps-9, Probable 40S ribosomal protein S9, mitochondrial, [RH, Score=199, Expect=3e-59]} {Smed: dd_Smed_v6_2348_0_1, dd_Smed_v6_2348_0_1, [RH, Score=217, Expect=1e-66]} {RNA1509_31979, RNA1509_36018} {RNA1310_17920, RNA1509_36018} {RNA1509_36018, RNA815_7320}
58. MligTC455_36883 94 1.96 Mlig455_070966

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_070966 {REF} {Length: 3363} {TRANSSPLICED} {RNA1509_39805} {RNA1310_22118.2} {RNA815_10951.2}
59. MligTC455_07516 112 2.34 Mlig455_060804

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_060804 {REF} {Length: 844} {Pfam: Presenilin [PF01080.19, score=19.5]} {RNA1509_21195} {RNA1310_23162} {RNA815_26275}
60. MligTC455_27911 45 0.94 Mlig455_049225, Mlig455_049228

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.777

 FAT4 0.953 - - - - - 0.953

Mlig455_049225 {REF} {Length: 12873} {Pfam: Cadherin domain [PF00028.19, score=824.7]; Cadherin prodomain like [PF08758.13, score=35.4]; Cadherin-like [PF16184.7, score=28.6]; Peptidase propeptide and YPEB domain [PF03413.21, score=22.0]; Bacterial cadherin-like domain [PF17803.3, score=19.8]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=310, Expect=1e-83]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=368, Expect=4e-101]} {Dmel: FBgn0001075, ft, fat, [Score=283, Expect=2e-75]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=176, Expect=4e-43]} {Smed: dd_Smed_v6_12895_0_1, dd_Smed_v6_12895_0_1, [Score=155, Expect=2e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}

Mlig455_049228 {REF} {Length: 24107} {Pfam: Cadherin domain [PF00028.19, score=1466.0]; RET Cadherin like domain 1 [PF17756.3, score=58.7]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=48.5]; Cadherin-like [PF16184.7, score=34.1]; Cadherin prodomain like [PF08758.13, score=29.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=396, Expect=8e-109]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=389, Expect=5e-107]} {Dmel: FBgn0001075, ft, fat, [Score=334, Expect=1e-90]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=183, Expect=5e-45]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=158, Expect=1e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}
61. MligTC455_30249 100 2.09 Mlig455_009659, Mlig455_048381

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_009659 {REF} {Length: 3024} {Pfam: Primase C terminal 2 (PriCT-2) [PF08707.13, score=46.3]} {RNA1509_20194} {RNA1310_3607.1} {RNA815_37227}

Mlig455_048381 {REF} {Length: 832} {RNA1509_33034} {RNA1310_614.1} {RNA815_31436}
62. MligTC455_24711 46 0.96 Mlig455_015705

Neo: -

Age: -

Regeneration-upregulated BL: 6.967

Regeneration-enriched BL: 6.967

 0.952 - - - - - 0.952 Mlig455_015705 {REF} {Length: 1380} {NoTransDecoderORF} {RNA1509_40708} {RNA1310_77515} {RNA815_26884}
63. MligTC455_32612 55 1.15 Mlig455_015630

Neo: -

Age: -

Region-enriched R2: 5.626/0.02523

 ARX 0.952 - - - - - 0.952 Mlig455_015630 {REF} {Length: 2012} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=133, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=118, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=119, Expect=3e-33]} {RNA1310_42333.1} {RNA815_48205}
64. MligTC455_36185 71 1.48 Mlig455_035985

Neo: -

Age: -

 KCNH7 0.952 - - - - - 0.952 Mlig455_035985 {REF} {Length: 3355} {Pfam: Ion transport protein [PF00520.33, score=118.6]; Ion channel [PF07885.18, score=46.2]; PAS domain [PF13426.9, score=44.5]; Cyclic nucleotide-binding domain [PF00027.31, score=43.8]; PAS fold [PF00989.27, score=22.5]; PAS fold [PF08447.14, score=21.9]} {Human: ENSG00000184611, KCNH7, potassium voltage-gated channel subfamily H member 7, [Score=795, Expect=0.0]; ENSG00000173826, KCNH6, potassium voltage-gated channel subfamily H member 6, [Score=786, Expect=0.0]; ENSG00000055118, KCNH2, potassium voltage-gated channel subfamily H member 2, [Score=773, Expect=0.0]} {Mouse: ENSMUSG00000059742, Kcnh7, potassium voltage-gated channel, subfamily H (eag-related), member 7, [Score=795, Expect=0.0]; ENSMUSG00000001901, Kcnh6, potassium voltage-gated channel, subfamily H (eag-related), member 6, [Score=794, Expect=0.0]; ENSMUSG00000038319, Kcnh2, potassium voltage-gated channel, subfamily H (eag-related), member 2, [Score=774, Expect=0.0]} {Dmel: FBgn0003353, sei, seizure, [Score=741, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=714, Expect=0.0]} {Smed: dd_Smed_v6_12621_0_1, dd_Smed_v6_12621_0_1, [Score=775, Expect=0.0]} {RNA1509_16542} {RNA1310_5129.1} {RNA815_4089.1}
65. MligTC455_23808 31 0.65 Mlig455_059306

Neo: -

Age: Down-Down-Up

 0.951 - - - - - 0.951 Mlig455_059306 {REF} {Length: 1845} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=30.7]} {RNA1509_46843} {RNA1310_11232} {RNA815_41042}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA