Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_08038 | 8 | 0.18 | Mlig455_002909 | Neo: - Age: - |
ARHGAP19 | Mlig455_002909 {REF} {Length: 2124} {Pfam: RhoGAP domain [PF00620.29, score=73.7]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=80.5, Expect=2e-15]; ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=80.5, Expect=2e-15]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=79.3, Expect=4e-15]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=61.2, Expect=2e-09]} {Celegans: WBGene00013135, rga-2, Rho GTPase Activating protein, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=54.3, Expect=1e-07]} {RNA1310_147775} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | - | - | - | - | |
RegionR2 | - | - | - | - | |
RegionR3 | - | - | - | - | |
RegionR4 | - | - | - | - | |
RegionR5 | - | - | - | - | |
RegionR6 | - | - | - | - | |
RegionR7 | - | - | - | - | |
RegionR8 | - | - | - | - |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | - | - | - | - | |
RegenerationR2 | - | - | - | - | |
RegenerationR3 | - | - | - | - | |
RegenerationR4 | - | - | - | - | |
RegenerationR5 | - | - | - | - | |
RegenerationR6 | - | - | - | - | |
RegenerationBL | - | - | - | - | |
RegenerationTP | - | - | - | - |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_08038 | 8 | 0.18 | Mlig455_002909 | Neo: - Age: - |
ARHGAP19 | 1 | - | - | - | - | 1.000 | - | Mlig455_002909 {REF} {Length: 2124} {Pfam: RhoGAP domain [PF00620.29, score=73.7]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=80.5, Expect=2e-15]; ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=80.5, Expect=2e-15]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=79.3, Expect=4e-15]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=61.2, Expect=2e-09]} {Celegans: WBGene00013135, rga-2, Rho GTPase Activating protein, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=54.3, Expect=1e-07]} {RNA1310_147775} |
2. | MligTC455_53595 | 20 | 0.42 | Mlig455_067432 | Neo: - Age: - |
SLC24A2 | 0.995 | - | - | - | - | 0.995 | - | Mlig455_067432 {REF} {Length: 4224} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=186.7]} {Human: ENSG00000155886, SLC24A2, solute carrier family 24 member 2, [RH, Score=498, Expect=4e-168]} {Mouse: ENSMUSG00000037996, Slc24a2, solute carrier family 24 (sodium/potassium/calcium exchanger), member 2, [RH, Score=502, Expect=2e-169]} {Dmel: FBgn0028704, Nckx30C, [RH, Score=499, Expect=2e-166]} {Celegans: WBGene00003569, ncx-4, Na/Ca eXchangers, [Score=223, Expect=3e-64]} {Smed: dd_Smed_v6_5868_0_4, dd_Smed_v6_5868_0_4, [Score=184, Expect=9e-51]} {RNA1509_26587} {RNA1310_76563} {RNA815_21902.1} |
3. | MligTC455_56068 | 7 | 0.15 | Mlig455_050265 | Neo: - Age: - |
0.992 | - | - | - | - | 0.992 | - | Mlig455_050265 {REF} {Length: 408} {NoTransDecoderORF} {RNA1509_8112} {RNA1310_65693} {RNA815_1829.1} | |
4. | MligTC455_22024 | 15 | 0.32 | Mlig455_020103, Mlig455_069893 | Neo: Int S/G2/M Age: - |
0.991 | - | - | - | - | 0.991 | - | Mlig455_020103 {REF} {Length: 2186} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=33.6]; Aspartyl protease [PF13650.8, score=27.9]; PNMA [PF14893.8, score=24.8]; Retroviral aspartyl protease [PF00077.22, score=22.0]} {RNA1509_39864} {RNA1310_9809} {RNA815_20192} Mlig455_069893 {REF} {Length: 2527} {Pfam: PNMA [PF14893.8, score=25.8]; Aspartyl protease [PF13650.8, score=19.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=19.4]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192} |
|
5. | MligTC455_32969 | 4 | 0.09 | Mlig455_031795 | Neo: - Age: - |
0.991 | - | - | - | - | 0.991 | - | Mlig455_031795 {REF} {Length: 1884} | |
6. | MligTC455_22272 | 6 | 0.13 | Mlig455_050013 | Neo: - Age: - |
0.99 | - | - | - | - | 0.990 | - | Mlig455_050013 {REF} {Length: 1355} {NoTransDecoderORF} {RNA1509_12830} {RNA1310_79708} {RNA815_9685.1} | |
7. | MligTC455_57008 | 10 | 0.22 | Mlig455_044186 | Neo: - Age: - |
0.986 | - | - | - | - | 0.986 | - | Mlig455_044186 {REF} {Length: 852} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.6]} {RNA1509_47056} {RNA1310_46488.2} {RNA815_14744.1} | |
8. | MligTC455_29859 | 11 | 0.22 | Mlig455_011021 | Neo: - Age: - |
ITPR1 | 0.982 | - | - | - | - | 0.982 | - | Mlig455_011021 {REF} {Length: 2073} {Pfam: Ion transport protein [PF00520.33, score=19.8]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=154, Expect=1e-38]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=138, Expect=1e-33]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=136, Expect=3e-33]} {Smed: dd_Smed_v6_3814_1_2, dd_Smed_v6_3814_1_2, [Score=551, Expect=0.0]} {RNA1509_25537} {RNA1310_434.1} {RNA815_101} |
9. | MligTC455_41909 | 3 | 0.07 | Mlig455_032661 | Neo: - Age: - |
0.982 | - | - | - | - | 0.982 | - | Mlig455_032661 {REF} {Length: 1046} {RNA1310_74699} {RNA815_34259} | |
10. | MligTC455_11603 | 6 | 0.12 | Mlig455_046639 | Neo: - Age: - |
0.981 | - | - | - | - | 0.981 | - | Mlig455_046639 {REF} {Length: 395} {NoTransDecoderORF} {RNA1509_56382} {RNA1310_86332} {RNA815_16344.2} | |
11. | MligTC455_13354 | 12 | 0.26 | Mlig455_019393 | Neo: - Age: - |
GRIK4 | 0.976 | - | - | - | - | 0.976 | - | Mlig455_019393 {REF} {Length: 2465} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.8]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=101, Expect=4e-23]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=99.4, Expect=1e-22]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=95.1, Expect=3e-21]} {Dmel: FBgn0038837, CG3822, [Score=103, Expect=3e-24]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=209, Expect=4e-65]} {RNA1509_10728} {RNA1310_13608.1} {RNA815_15283} |
12. | MligTC455_30533 | 175 | 3.66 | Mlig455_011508 | Neo: - Age: logFC(26M/2M)=-0.396 |
ODF2 | 0.976 | - | - | - | - | 0.976 | - | Mlig455_011508 {REF} {Length: 3294} {TRANSSPLICED} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [Score=109, Expect=5e-24]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_3609_0_2, dd_Smed_v6_3609_0_2, [Score=89.4, Expect=3e-18]} {RNA1509_12480} {RNA1310_8290} {RNA815_8319} |
13. | MligTC455_08381 | 23 | 0.47 | Mlig455_002943 | Neo: - Age: - Region-enriched R2: 6.789/0.00727 |
0.974 | - | - | - | - | 0.974 | - | Mlig455_002943 {REF} {Length: 944} {NoTransDecoderORF} {RNA1310_97351} {RNA815_52261} | |
14. | MligTC455_14933 | 10 | 0.2 | Mlig455_042268 | Neo: - Age: - |
0.974 | - | - | - | - | 0.974 | - | Mlig455_042268 {REF} {Length: 1019} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [Score=45.8, Expect=9e-07]} {RNA1509_48973} {RNA1310_22428.1} {RNA815_17155.1} | |
15. | MligTC455_26607 | 9 | 0.18 | Mlig455_015056 | Neo: - Age: - |
ANK1 | 0.974 | - | - | - | - | 0.974 | - | Mlig455_015056 {REF} {Length: 4136} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=354.3]; Ankyrin repeats (many copies) [PF13637.8, score=231.2]; Ankyrin repeat [PF00023.32, score=227.6]; Ankyrin repeat [PF13606.8, score=212.8]; Ankyrin repeats (many copies) [PF13857.8, score=192.8]; Mab-21 protein [PF03281.16, score=43.9]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=253, Expect=7e-68]; ENSG00000145362, ANK2, ankyrin 2, [Score=245, Expect=2e-65]; ENSG00000151150, ANK3, ankyrin 3, [Score=243, Expect=2e-64]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=241, Expect=2e-64]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=238, Expect=4e-63]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=236, Expect=2e-62]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=242, Expect=1e-64]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=229, Expect=1e-60]} {Smed: dd_Smed_v6_2072_0_26, dd_Smed_v6_2072_0_26, [Score=224, Expect=3e-59]} {RNA1509_33337} {RNA1310_2213.1, RNA1509_33337} {RNA1509_33337, RNA815_649.1} |
16. | MligTC455_27381 | 18 | 0.38 | Mlig455_005326, Mlig455_056074, Mlig455_071072 | Neo: - Age: - |
0.974 | - | - | - | - | 0.974 | - | Mlig455_005326 {REF} {Length: 1415} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696} Mlig455_056074 {REF} {Length: 2219} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696} Mlig455_071072 {REF} {Length: 2219} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696} |
|
17. | MligTC455_43177 | 11 | 0.22 | Mlig455_049065 | Neo: - Age: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_049065 {REF} {Length: 1047} {NoTransDecoderORF} {RNA1310_144315} | |
18. | MligTC455_10895 | 168 | 3.49 | Mlig455_026819 | Neo: - Age: Down-Down-Down Region-enriched R3: 2.926/0.02755 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_026819 {REF} {Length: 789} {NoTransDecoderORF} {RNA1310_51062} {RNA815_26657} | |
19. | MligTC455_11416 | 9 | 0.18 | Mlig455_070337 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_070337 {REF} {Length: 3699} {NoTransDecoderORF} {RNA1310_92196} {RNA815_36940} | |
20. | MligTC455_23653 | 43 | 0.89 | Mlig455_017999 | Neo: Irradiation Age: Down-Down-Down |
SPDYC | 0.96 | - | - | - | - | 0.960 | - | Mlig455_017999 {REF} {Length: 1728} {TRANSSPLICED} {Pfam: Cell cycle regulatory protein [PF11357.10, score=101.1]} {Human: ENSG00000204710, SPDYC, speedy/RINGO cell cycle regulator family member C, [RH, Score=92.0, Expect=1e-20]; ENSG00000163806, SPDYA, speedy/RINGO cell cycle regulator family member A, [RH, Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000052525, Spdya, speedy/RINGO cell cycle regulator family, member A, [RH, Score=87.4, Expect=4e-19]} {Smed: dd_Smed_v6_29468_0_1, dd_Smed_v6_29468_0_1, [RH, Score=102, Expect=9e-25]} {RNA1509_12112, RNA1509_25393} {RNA1310_23429, RNA1509_25393} {RNA1509_25393, RNA815_28518} |
21. | MligTC455_37923 | 25 | 0.52 | Mlig455_029843 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_029843 {REF} {Length: 657} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_54013.1} {RNA815_36932.1} | |
22. | MligTC455_22013 | 85 | 1.78 | Mlig455_005596, Mlig455_053497, Mlig455_062221 | Neo: - Age: Up-Down-Down |
RTL1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_005596 {REF} {Length: 4617} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.3]; Integrase zinc binding domain [PF17921.3, score=62.4]; Integrase core domain [PF00665.28, score=40.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.3, Expect=1e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.2, Expect=4e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=243, Expect=2e-68]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192} Mlig455_053497 {REF} {Length: 2290} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=48.6]; 2-cysteine adaptor domain [PF08793.12, score=38.9]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=38.0]; Suppressor of cytokine signalling [PF12610.10, score=19.9]; Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain [PF17927.3, score=19.5]} {RNA1509_39864} {RNA1310_103404} {RNA815_38442} Mlig455_062221 {REF} {Length: 3363} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.5]; Aspartyl protease [PF13650.8, score=26.8]; PNMA [PF14893.8, score=21.9]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=62.4, Expect=4e-09]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=179, Expect=3e-46]} {RNA1509_39864} {RNA1310_9809} {RNA815_20192} |
23. | MligTC455_48019 | 15 | 0.32 | Mlig455_031400 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_031400 {REF} {Length: 893} {NoTransDecoderORF} {RNA1310_54309} | |
24. | MligTC455_00754 | 12 | 0.24 | Mlig455_041596 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_041596 {REF} {Length: 799} {NoTransDecoderORF} {RNA1310_118711} {RNA815_36588} | |
25. | MligTC455_21941 | 57 | 1.2 | Mlig455_005337, Mlig455_008287, Mlig455_042435, Mlig455_042486 | Neo: - Age: Down-Up-Down |
0.953 | - | - | - | - | 0.953 | - | Mlig455_005337 {REF} {Length: 1085} {RNA1310_43853} {RNA815_33228} Mlig455_008287 {REF} {Length: 716} {Pfam: Phage integrase family [PF00589.24, score=27.0]} {RNA1310_43853} {RNA815_33228} Mlig455_042435 {REF} {Length: 1075} {Pfam: Phage integrase family [PF00589.24, score=24.5]} {RNA1310_28668} {RNA815_33228} Mlig455_042486 {REF} {Length: 1073} {Pfam: Phage integrase family [PF00589.24, score=24.5]} {RNA1509_29315} {RNA1310_28668} {RNA815_33228} |
|
26. | MligTC455_56067 | 3 | 0.07 | Mlig455_040324 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_040324 {REF} {Length: 282} {NoTransDecoderORF} {RNA1310_65693} {RNA815_1829.1} |