TomoSeq data search

Data search

Results for MligTC455_43177

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43177	11	0.22	Mlig455_049065	Neo: - Age: -		Mlig455_049065 {REF} {Length: 1047} {NoTransDecoderORF} {RNA1310_144315}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_43177

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_43177

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43177	11	0.22	Mlig455_049065	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_049065 {REF} {Length: 1047} {NoTransDecoderORF} {RNA1310_144315}
2.	MligTC455_23653	43	0.89	Mlig455_017999	Neo: Irradiation Age: Down-Down-Down	SPDYC	0.987	-	-	-	-	0.987	-	Mlig455_017999 {REF} {Length: 1728} {TRANSSPLICED} {Pfam: Cell cycle regulatory protein [PF11357.10, score=101.1]} {Human: ENSG00000204710, SPDYC, speedy/RINGO cell cycle regulator family member C, [RH, Score=92.0, Expect=1e-20]; ENSG00000163806, SPDYA, speedy/RINGO cell cycle regulator family member A, [RH, Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000052525, Spdya, speedy/RINGO cell cycle regulator family, member A, [RH, Score=87.4, Expect=4e-19]} {Smed: dd_Smed_v6_29468_0_1, dd_Smed_v6_29468_0_1, [RH, Score=102, Expect=9e-25]} {RNA1509_12112, RNA1509_25393} {RNA1310_23429, RNA1509_25393} {RNA1509_25393, RNA815_28518}
3.	MligTC455_09356	14	0.29	Mlig455_049750	Neo: - Age: - Regeneration-upregulated R2: 5.695 Regeneration-enriched R2: 5.695		0.985	-	-	-	-	0.985	-	Mlig455_049750 {REF} {Length: 377} {RNA1310_75863}
4.	MligTC455_28356	50	1.03	Mlig455_037254	Neo: - Age: Up-Down-Down		0.982	-	-	-	-	0.982	-	Mlig455_037254 {REF} {Length: 1961} {RNA1509_11960} {RNA1310_11061} {RNA815_18873}
5.	MligTC455_32969	4	0.09	Mlig455_031795	Neo: - Age: -		0.982	-	-	-	-	0.982	-	Mlig455_031795 {REF} {Length: 1884}
6.	MligTC455_56068	7	0.15	Mlig455_050265	Neo: - Age: -		0.979	-	-	-	-	0.979	-	Mlig455_050265 {REF} {Length: 408} {NoTransDecoderORF} {RNA1509_8112} {RNA1310_65693} {RNA815_1829.1}
7.	MligTC455_11416	9	0.18	Mlig455_070337	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_070337 {REF} {Length: 3699} {NoTransDecoderORF} {RNA1310_92196} {RNA815_36940}
8.	MligTC455_13354	12	0.26	Mlig455_019393	Neo: - Age: -	GRIK4	0.975	-	-	-	-	0.975	-	Mlig455_019393 {REF} {Length: 2465} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.8]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=101, Expect=4e-23]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=99.4, Expect=1e-22]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=95.1, Expect=3e-21]} {Dmel: FBgn0038837, CG3822, [Score=103, Expect=3e-24]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=209, Expect=4e-65]} {RNA1509_10728} {RNA1310_13608.1} {RNA815_15283}
9.	MligTC455_43700	28	0.58	Mlig455_047711	Neo: - Age: - Regeneration-upregulated R2: 3.521 Regeneration-enriched R2: 3.521	LZTS3	0.975	-	-	-	-	0.975	-	Mlig455_047711 {REF} {Length: 3139} {Pfam: Fez1 [PF06818.17, score=51.8]} {Human: ENSG00000088899, LZTS3, leucine zipper tumor suppressor family member 3, [Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_9487_0_1, dd_Smed_v6_9487_0_1, [RH, Score=65.1, Expect=5e-11]} {RNA1509_57436} {RNA1310_22131} {RNA815_51549}
10.	MligTC455_10895	168	3.49	Mlig455_026819	Neo: - Age: Down-Down-Down Region-enriched R3: 2.926/0.02755 Region-enriched R4: 2.348/0.02223		0.973	-	-	-	-	0.973	-	Mlig455_026819 {REF} {Length: 789} {NoTransDecoderORF} {RNA1310_51062} {RNA815_26657}
11.	MligTC455_08381	23	0.47	Mlig455_002943	Neo: - Age: - Region-enriched R2: 6.789/0.00727		0.972	-	-	-	-	0.972	-	Mlig455_002943 {REF} {Length: 944} {NoTransDecoderORF} {RNA1310_97351} {RNA815_52261}
12.	MligTC455_14933	10	0.2	Mlig455_042268	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_042268 {REF} {Length: 1019} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [Score=45.8, Expect=9e-07]} {RNA1509_48973} {RNA1310_22428.1} {RNA815_17155.1}
13.	MligTC455_26607	9	0.18	Mlig455_015056	Neo: - Age: -	ANK1	0.972	-	-	-	-	0.972	-	Mlig455_015056 {REF} {Length: 4136} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=354.3]; Ankyrin repeats (many copies) [PF13637.8, score=231.2]; Ankyrin repeat [PF00023.32, score=227.6]; Ankyrin repeat [PF13606.8, score=212.8]; Ankyrin repeats (many copies) [PF13857.8, score=192.8]; Mab-21 protein [PF03281.16, score=43.9]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=253, Expect=7e-68]; ENSG00000145362, ANK2, ankyrin 2, [Score=245, Expect=2e-65]; ENSG00000151150, ANK3, ankyrin 3, [Score=243, Expect=2e-64]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=241, Expect=2e-64]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=238, Expect=4e-63]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=236, Expect=2e-62]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=242, Expect=1e-64]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=229, Expect=1e-60]} {Smed: dd_Smed_v6_2072_0_26, dd_Smed_v6_2072_0_26, [Score=224, Expect=3e-59]} {RNA1509_33337} {RNA1310_2213.1, RNA1509_33337} {RNA1509_33337, RNA815_649.1}
14.	MligTC455_30533	175	3.66	Mlig455_011508	Neo: - Age: logFC(26M/2M)=-0.396	ODF2	0.971	-	-	-	-	0.971	-	Mlig455_011508 {REF} {Length: 3294} {TRANSSPLICED} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [Score=109, Expect=5e-24]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_3609_0_2, dd_Smed_v6_3609_0_2, [Score=89.4, Expect=3e-18]} {RNA1509_12480} {RNA1310_8290} {RNA815_8319}
15.	MligTC455_48019	15	0.32	Mlig455_031400	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_031400 {REF} {Length: 893} {NoTransDecoderORF} {RNA1310_54309}
16.	MligTC455_08038	8	0.18	Mlig455_002909	Neo: - Age: -	ARHGAP19	0.97	-	-	-	-	0.970	-	Mlig455_002909 {REF} {Length: 2124} {Pfam: RhoGAP domain [PF00620.29, score=73.7]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=80.5, Expect=2e-15]; ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=80.5, Expect=2e-15]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=79.3, Expect=4e-15]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=61.2, Expect=2e-09]} {Celegans: WBGene00013135, rga-2, Rho GTPase Activating protein, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=54.3, Expect=1e-07]} {RNA1310_147775}
17.	MligTC455_07965	20	0.41	Mlig455_022984	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_022984 {REF} {Length: 2834} {NoTransDecoderORF} {RNA1509_35506} {RNA1310_48890} {RNA815_24918}
18.	MligTC455_53595	20	0.42	Mlig455_067432	Neo: - Age: -	SLC24A2	0.968	-	-	-	-	0.968	-	Mlig455_067432 {REF} {Length: 4224} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=186.7]} {Human: ENSG00000155886, SLC24A2, solute carrier family 24 member 2, [RH, Score=498, Expect=4e-168]} {Mouse: ENSMUSG00000037996, Slc24a2, solute carrier family 24 (sodium/potassium/calcium exchanger), member 2, [RH, Score=502, Expect=2e-169]} {Dmel: FBgn0028704, Nckx30C, [RH, Score=499, Expect=2e-166]} {Celegans: WBGene00003569, ncx-4, Na/Ca eXchangers, [Score=223, Expect=3e-64]} {Smed: dd_Smed_v6_5868_0_4, dd_Smed_v6_5868_0_4, [Score=184, Expect=9e-51]} {RNA1509_26587} {RNA1310_76563} {RNA815_21902.1}
19.	MligTC455_22024	15	0.32	Mlig455_020103, Mlig455_069893	Neo: Int S/G2/M Age: -		0.963	-	-	-	-	0.963	-	Mlig455_020103 {REF} {Length: 2186} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=33.6]; Aspartyl protease [PF13650.8, score=27.9]; PNMA [PF14893.8, score=24.8]; Retroviral aspartyl protease [PF00077.22, score=22.0]} {RNA1509_39864} {RNA1310_9809} {RNA815_20192} Mlig455_069893 {REF} {Length: 2527} {Pfam: PNMA [PF14893.8, score=25.8]; Aspartyl protease [PF13650.8, score=19.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=19.4]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192}
20.	MligTC455_22272	6	0.13	Mlig455_050013	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_050013 {REF} {Length: 1355} {NoTransDecoderORF} {RNA1509_12830} {RNA1310_79708} {RNA815_9685.1}
21.	MligTC455_34488	72	1.5	Mlig455_051688	Neo: - Age: -	DAG1	0.962	-	-	-	-	0.962	-	Mlig455_051688 {REF} {Length: 4571} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=47.3]; Alpha-Dystroglycan N-terminal domain 2 [PF18424.3, score=31.6]} {Human: ENSG00000173402, DAG1, dystroglycan 1, [RH, Score=61.2, Expect=1e-08]} {Mouse: ENSMUSG00000039952, Dag1, dystroglycan 1, [RH, Score=63.5, Expect=2e-09]} {Smed: dd_Smed_v6_11814_0_1, dd_Smed_v6_11814_0_1, [RH, Score=82.8, Expect=8e-16]} {RNA1509_57075} {RNA1310_1596.1, RNA1509_57075} {RNA1509_57075, RNA815_7113}
22.	MligTC455_45774	17	0.35	Mlig455_063164	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_063164 {REF} {Length: 623} {NoTransDecoderORF} {RNA1509_27637} {RNA1310_5757} {RNA815_34558}
23.	MligTC455_01196	7	0.15	Mlig455_005481	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_005481 {REF} {Length: 664} {RNA1310_91193}
24.	MligTC455_07472	9	0.19	Mlig455_000954	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_000954 {REF} {Length: 308} {NoTransDecoderORF} {RNA1509_43648} {RNA1310_19559.1} {RNA815_8352}
25.	MligTC455_21941	57	1.2	Mlig455_005337, Mlig455_008287, Mlig455_042435, Mlig455_042486	Neo: - Age: Down-Up-Down		0.96	-	-	-	-	0.960	-	Mlig455_005337 {REF} {Length: 1085} {RNA1310_43853} {RNA815_33228} Mlig455_008287 {REF} {Length: 716} {Pfam: Phage integrase family [PF00589.24, score=27.0]} {RNA1310_43853} {RNA815_33228} Mlig455_042435 {REF} {Length: 1075} {Pfam: Phage integrase family [PF00589.24, score=24.5]} {RNA1310_28668} {RNA815_33228} Mlig455_042486 {REF} {Length: 1073} {Pfam: Phage integrase family [PF00589.24, score=24.5]} {RNA1509_29315} {RNA1310_28668} {RNA815_33228}
26.	MligTC455_07321	18	0.38	Mlig455_032557	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_032557 {REF} {Length: 587} {NoTransDecoderORF}
27.	MligTC455_17243	5	0.11	Mlig455_027608	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_027608 {REF} {Length: 437} {NoTransDecoderORF}
28.	MligTC455_29859	11	0.22	Mlig455_011021	Neo: - Age: -	ITPR1	0.955	-	-	-	-	0.955	-	Mlig455_011021 {REF} {Length: 2073} {Pfam: Ion transport protein [PF00520.33, score=19.8]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=154, Expect=1e-38]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=138, Expect=1e-33]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=136, Expect=3e-33]} {Smed: dd_Smed_v6_3814_1_2, dd_Smed_v6_3814_1_2, [Score=551, Expect=0.0]} {RNA1509_25537} {RNA1310_434.1} {RNA815_101}
29.	MligTC455_30686	63	1.32	Mlig455_039621	Neo: - Age: logFC(26M/2M)=0.268		0.955	-	-	-	-	0.955	-	Mlig455_039621 {REF} {Length: 3457} {TRANSSPLICED} {RNA1509_47978} {RNA1310_16577.1} {RNA815_31875}
30.	MligTC455_30687	63	1.32	Mlig455_051422	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_051422 {REF} {Length: 3419} {RNA1509_47978} {RNA1310_70803} {RNA815_36635}
31.	MligTC455_55680	10	0.21	Mlig455_008508	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_008508 {REF} {Length: 462} {NoTransDecoderORF}
32.	MligTC455_57008	10	0.22	Mlig455_044186	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_044186 {REF} {Length: 852} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.6]} {RNA1509_47056} {RNA1310_46488.2} {RNA815_14744.1}
33.	MligTC455_18602	116	2.42	Mlig455_003494	Neo: - Age: -	KCTD21	0.953	-	-	-	-	0.953	-	Mlig455_003494 {REF} {Length: 3275} {Pfam: BTB/POZ domain [PF02214.24, score=65.0]} {Human: ENSG00000188997, KCTD21, potassium channel tetramerization domain containing 21, [Score=88.6, Expect=3e-21]; ENSG00000183783, KCTD8, potassium channel tetramerization domain containing 8, [Score=87.8, Expect=7e-19]} {Mouse: ENSMUSG00000044952, Kctd21, potassium channel tetramerisation domain containing 21, [Score=87.8, Expect=5e-20]; ENSMUSG00000037653, Kctd8, potassium channel tetramerisation domain containing 8, [Score=85.9, Expect=2e-18]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [Score=82.0, Expect=3e-18]} {Celegans: WBGene00014848, VM106R.1, [Score=77.4, Expect=4e-16]} {Smed: dd_Smed_v6_8654_0_1, dd_Smed_v6_8654_0_1, [Score=89.0, Expect=8e-21]} {RNA1310_21779.1} {RNA815_18356}
34.	MligTC455_18547	16	0.33	Mlig455_058297	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_058297 {REF} {Length: 647} {NoTransDecoderORF}