Data search


search
Exact
Search

Results for MligTC455_08478

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08478 59 1.22 Mlig455_009785

Neo: -

Age: -

Mlig455_009785 {REF} {Length: 348} {NoTransDecoderORF}

Cumulative graph for MligTC455_08478

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.466 1.045 0.99971 1.00000
RegionR2 1.948 1.045 0.99987 1.00000
RegionR3 2.733 1.045 0.99997 1.00000
RegionR4 0.294 1.045 0.99976 1.00000
RegionR5 2.346 1.045 0.99986 1.00000
RegionR6 1.518 1.045 0.99992 1.00000
RegionR7 0.253 1.045 0.99998 1.00000
RegionR8 -3.626 1.045 0.99982 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.753 1.045 1.00000 1.00000
RegenerationR2 3.544 1.045 0.04948 0.36711
RegenerationR3 2.964 1.045 0.04930 0.38543
RegenerationR4 2.467 1.045 0.09059 0.47028
RegenerationR5 0.832 1.045 0.32477 0.74734
RegenerationR6 4.16 1.045 0.02489 0.19673
RegenerationBL 2.369 1.045 0.33615 0.70285
RegenerationTP 4.569 1.045 0.16082 0.58960


Genes with expression patterns similar to MligTC455_08478

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08478 59 1.22 Mlig455_009785

Neo: -

Age: -

2 - - - 1.000 1.000 - Mlig455_009785 {REF} {Length: 348} {NoTransDecoderORF}
2. MligTC455_29770 150 3.12 Mlig455_013548, Mlig455_041433

Neo: -

Age: -

MAP3K19 0.961 - - - - 0.961 -

Mlig455_013548 {REF} {Length: 571} {NoTransDecoderORF} {RNA1509_6748} {RNA1310_95865} {RNA815_24422.1}

Mlig455_041433 {REF} {Length: 1974} {Pfam: Protein kinase domain [PF00069.27, score=69.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=84.0, Expect=3e-19]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=80.5, Expect=3e-18]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=70.1, Expect=8e-15]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=61.2, Expect=5e-12]} {Smed: dd_Smed_v6_2030_0_29, dd_Smed_v6_2030_0_29, [Score=75.1, Expect=3e-18]} {RNA1509_48626} {RNA1310_17852.1} {RNA815_25899}
3. MligTC455_53167 621 12.93 Mlig455_035205, Mlig455_035254

Neo: -

Age: -

TEP1 0.959 - - - - 0.959 -

Mlig455_035205 {REF} {Length: 3182} {Pfam: Domain of unknown function (DUF4062) [PF13271.8, score=42.8]; NACHT domain [PF05729.14, score=19.7]} {Human: ENSG00000129566, TEP1, telomerase associated protein 1, [Score=143, Expect=4e-34]} {Mouse: ENSMUSG00000006281, Tep1, telomerase associated protein 1, [Score=121, Expect=2e-27]} {Smed: dd_Smed_v6_9074_0_1, dd_Smed_v6_9074_0_1, [RH, Score=335, Expect=8e-102]} {RNA1509_45368, RNA1509_7043} {RNA1310_6418, RNA1509_45368} {RNA1509_45368, RNA815_7934}

Mlig455_035254 {REF} {Length: 3176} {Pfam: Domain of unknown function (DUF4062) [PF13271.8, score=42.8]; NACHT domain [PF05729.14, score=19.7]; AAA ATPase domain [PF13191.8, score=19.7]} {Human: ENSG00000129566, TEP1, telomerase associated protein 1, [Score=142, Expect=6e-34]} {Mouse: ENSMUSG00000006281, Tep1, telomerase associated protein 1, [Score=119, Expect=1e-26]} {Smed: dd_Smed_v6_9074_0_1, dd_Smed_v6_9074_0_1, [RH, Score=329, Expect=2e-99]} {RNA1509_7043} {RNA1310_6418, RNA1509_7043} {RNA1509_7043, RNA815_7934}
4. MligTC455_13864 257 5.36 Mlig455_036449

Neo: -

Age: logFC(26M/2M)=-0.407

0.958 - - - 0.958 - - Mlig455_036449 {REF} {Length: 2721} {RNA1509_33524, RNA1509_45606} {RNA1310_15271, RNA1509_33524, RNA1509_45606} {RNA1509_33524, RNA1509_45606, RNA815_24673}
5. MligTC455_46518 283 5.9 Mlig455_004530, Mlig455_028532, Mlig455_064722

Neo: -

Age: -

CHRNA4 0.956 - - - - 0.956 -

Mlig455_004530 {REF} {Length: 3050} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=183.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=126.0]} {Human: ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=261, Expect=4e-78]} {Mouse: ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=250, Expect=7e-74]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=238, Expect=7e-71]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=238, Expect=9e-71]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=254, Expect=4e-77]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=231, Expect=2e-68]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [RH, Score=560, Expect=0.0]} {RNA1509_15763} {RNA1310_13813} {RNA815_7852}

Mlig455_028532 {REF} {Length: 6717} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=182.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=125.6]} {Human: ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=262, Expect=1e-77]} {Mouse: ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=250, Expect=3e-73]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=239, Expect=2e-70]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=238, Expect=4e-70]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=255, Expect=1e-76]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=231, Expect=8e-68]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [RH, Score=560, Expect=0.0]} {RNA1509_15763} {RNA1310_13813} {RNA815_7852}

Mlig455_064722 {REF} {Length: 349} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=26.8]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [Score=75.9, Expect=3e-17]} {RNA1509_15763} {RNA1310_15286} {RNA815_7852}
6. MligTC455_49790 984 20.51 Mlig455_027726, Mlig455_027922, Mlig455_027932

Neo: -

Age: logFC(26M/2M)=-0.312

LRGUK 0.956 - - - - 0.956 -

Mlig455_027726 {REF} {Length: 2295} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=58.8]; Leucine rich repeat [PF13855.8, score=48.7]; Leucine-rich repeat [PF14580.8, score=40.7]; Leucine Rich repeat [PF13516.8, score=20.3]} {Human: ENSG00000155530, LRGUK, leucine rich repeats and guanylate kinase domain containing, [Score=79.7, Expect=3e-15]} {Mouse: ENSMUSG00000056215, Lrguk, leucine-rich repeats and guanylate kinase domain containing, [Score=84.0, Expect=8e-17]} {Dmel: FBgn0028992, sds22, [Score=68.2, Expect=2e-12]} {Celegans: WBGene00189952, K10D2.8, [Score=81.6, Expect=6e-17]} {Smed: dd_Smed_v6_8299_0_1, dd_Smed_v6_8299_0_1, [Score=62.8, Expect=9e-11]} {RNA1509_20921, RNA1509_32702} {RNA1310_17838.2, RNA1509_20921, RNA1509_32702} {RNA1509_20921, RNA1509_32702, RNA815_6953.1}

Mlig455_027922 {REF} {Length: 1738} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=58.8]; Leucine rich repeat [PF13855.8, score=48.7]; Leucine-rich repeat [PF14580.8, score=40.7]; Leucine Rich repeat [PF13516.8, score=20.3]} {Human: ENSG00000155530, LRGUK, leucine rich repeats and guanylate kinase domain containing, [Score=79.7, Expect=3e-15]} {Mouse: ENSMUSG00000056215, Lrguk, leucine-rich repeats and guanylate kinase domain containing, [Score=84.0, Expect=8e-17]} {Dmel: FBgn0028992, sds22, [Score=68.2, Expect=2e-12]} {Celegans: WBGene00189952, K10D2.8, [Score=81.6, Expect=6e-17]} {Smed: dd_Smed_v6_8299_0_1, dd_Smed_v6_8299_0_1, [Score=62.8, Expect=9e-11]} {RNA1509_20921} {RNA1310_17838.2} {RNA815_6953.1}

Mlig455_027932 {REF} {Length: 1651} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=62.4]; Leucine rich repeat [PF13855.8, score=51.0]; Leucine-rich repeat [PF14580.8, score=42.0]; Leucine Rich repeat [PF13516.8, score=18.6]} {Human: ENSG00000155530, LRGUK, leucine rich repeats and guanylate kinase domain containing, [Score=75.5, Expect=1e-14]} {Mouse: ENSMUSG00000056215, Lrguk, leucine-rich repeats and guanylate kinase domain containing, [Score=80.9, Expect=1e-16]} {Dmel: FBgn0028992, sds22, [Score=68.6, Expect=6e-13]} {Celegans: WBGene00189952, K10D2.8, [Score=82.8, Expect=7e-18]} {Smed: dd_Smed_v6_5405_0_1, dd_Smed_v6_5405_0_1, [Score=63.2, Expect=2e-11]} {RNA1509_32702} {RNA1310_17838.2} {RNA815_6953.1}
7. MligTC455_52879 86 1.8 Mlig455_021912

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_021912 {REF} {Length: 430} {Pfam: Protein export membrane protein [PF02355.18, score=24.1]; Protein of unknown function (DUF445) [PF04286.14, score=19.8]}
8. MligTC455_37458 120 2.49 Mlig455_037280, Mlig455_042333, Mlig455_055120

Neo: -

Age: -

CUBN 0.954 - - - - 0.954 -

Mlig455_037280 {REF} {Length: 3846} {Pfam: CUB domain [PF00431.22, score=68.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=56.6, Expect=3e-08]; ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=55.5, Expect=5e-08]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.5, Expect=6e-08]} {Dmel: FBgn0031879, uif, uninflatable, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00011222, R10H10.3, [RH, Score=53.1, Expect=9e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=52.0, Expect=3e-07]} {RNA1509_23859} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_042333 {REF} {Length: 1368} {Pfam: Integrase core domain [PF00665.28, score=32.9]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=60.1, Expect=4e-11]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_055120 {REF} {Length: 884} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}
9. MligTC455_46602 231 4.8 Mlig455_024992

Neo: -

Age: logFC(26M/2M)=0.375

PTPN6 0.952 - - - - 0.952 - Mlig455_024992 {REF} {Length: 2678} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=216.4]; SH2 domain [PF00017.26, score=23.1]} {Human: ENSG00000111679, PTPN6, protein tyrosine phosphatase, non-receptor type 6, [Score=203, Expect=2e-57]; ENSG00000179295, PTPN11, protein tyrosine phosphatase, non-receptor type 11, [Score=201, Expect=8e-57]} {Mouse: ENSMUSG00000004266, Ptpn6, protein tyrosine phosphatase, non-receptor type 6, [Score=214, Expect=2e-61]} {Dmel: FBgn0261985, Ptpmeg, Protein tyrosine phosphatase Meg, [Score=149, Expect=1e-37]} {Celegans: WBGene00004214, ptp-2, Tyrosine-protein phosphatase non-receptor type ptp-2, [Score=184, Expect=2e-50]} {Smed: dd_Smed_v6_5785_0_1, dd_Smed_v6_5785_0_1, [Score=214, Expect=1e-61]} {RNA1509_17439} {RNA1310_10787.1, RNA1509_17439} {RNA1509_17439, RNA815_8481}
10. MligTC455_15654 273 5.7 Mlig455_027011

Neo: -

Age: Down-Up-Down

TTC23 0.951 - - - - 0.951 - Mlig455_027011 {REF} {Length: 2515} {Pfam: Tetratricopeptide repeat [PF13424.8, score=82.1]; Tetratricopeptide repeat [PF13374.8, score=53.9]; Tetratricopeptide repeat [PF00515.30, score=41.3]; Tetratricopeptide repeat [PF13181.8, score=23.9]; Tetratricopeptide repeat [PF13176.8, score=22.9]; Tetratricopeptide repeat [PF07719.19, score=20.5]; MalT-like TPR region [PF17874.3, score=18.5]} {Human: ENSG00000103852, TTC23, tetratricopeptide repeat domain 23, [RH, Score=148, Expect=1e-38]} {Mouse: ENSMUSG00000030555, Ttc23, tetratricopeptide repeat domain 23, [RH, Score=160, Expect=4e-43]} {Smed: dd_Smed_v6_15795_0_1, dd_Smed_v6_15795_0_1, [RH, Score=204, Expect=3e-60]} {RNA1509_43344} {RNA1310_7447.1} {RNA815_1983}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA