TomoSeq data search

Data search

Results for MligTC455_08795

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_08795	29	0.60	Mlig455_005761	Neo: - Age: Down-Up-Down		Mlig455_005761 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_57252} {RNA1310_97275.1} {RNA815_50075}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_08795

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.85	0.941	0.99961	1.00000
RegionR2	-0.133	0.941	0.99993	1.00000
RegionR3	1.614	0.941	1.00000	1.00000
RegionR4	1.78	0.941	0.99987	1.00000
RegionR5	2.483	0.941	0.99988	1.00000
RegionR6	1.115	0.941	0.99990	1.00000
RegionR7	-0.262	0.941	0.99998	1.00000
RegionR8	-2.747	0.941	0.99976	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.038	0.941	0.99998	1.00000
RegenerationR2	3.995	0.941	0.05168	0.37544
RegenerationR3	2.364	0.941	0.02763	0.29866
RegenerationR4	1.794	0.941	0.10060	0.49164
RegenerationR5	0.049	0.941	0.40015	0.79932
RegenerationR6	3.603	0.941	0.03375	0.23003
RegenerationBL	3.36	0.941	0.10182	0.37605
RegenerationTP	0.796	0.941	0.81354	1.00000

Genes with expression patterns similar to MligTC455_08795

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08795	29	0.6	Mlig455_005761	Neo: - Age: Down-Up-Down		2	-	-	-	1.000	1.000	-	Mlig455_005761 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_57252} {RNA1310_97275.1} {RNA815_50075}
2.	MligTC455_23227	61	1.28	Mlig455_001505	Neo: - Age: -	EPHA7	1.728	-	-	-	0.770	0.958	-	Mlig455_001505 {REF} {Length: 4755} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=295.0]; Protein kinase domain [PF00069.27, score=136.9]; Ephrin receptor ligand binding domain [PF01404.21, score=117.2]; Fibronectin type III domain [PF00041.23, score=79.8]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=70.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=58.4]; SAM domain (Sterile alpha motif) [PF00536.32, score=57.4]; Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=26.4]; ABC1 atypical kinase-like domain [PF03109.18, score=22.2]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.5]} {Human: ENSG00000135333, EPHA7, EPH receptor A7, [RH, Score=716, Expect=0.0]; ENSG00000145242, EPHA5, EPH receptor A5, [RH, Score=696, Expect=0.0]; ENSG00000116106, EPHA4, EPH receptor A4, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000028289, Epha7, Eph receptor A7, [RH, Score=716, Expect=0.0]; ENSMUSG00000026235, Epha4, Eph receptor A4, [RH, Score=697, Expect=0.0]; ENSMUSG00000029245, Epha5, Eph receptor A5, [RH, Score=692, Expect=0.0]} {Dmel: FBgn0025936, Eph, Eph receptor tyrosine kinase, [RH, Score=676, Expect=0.0]} {Celegans: WBGene00006868, vab-1, Ephrin receptor 1, [RH, Score=485, Expect=6e-153]} {Smed: dd_Smed_v6_16928_0_1, dd_Smed_v6_16928_0_1, [RH, Score=579, Expect=0.0]} {RNA1509_51951} {RNA1310_5149.1} {RNA815_23934}
3.	MligTC455_15475	25	0.51	Mlig455_001532	Neo: - Age: -		0.992	-	-	-	0.992	-	-	Mlig455_001532 {REF} {Length: 2000} {NoTransDecoderORF} {RNA1509_39091} {RNA1310_41102} {RNA815_50587}
4.	MligTC455_46613	57	1.18	Mlig455_057193	Neo: - Age: -	TNR	0.988	-	-	-	-	0.988	-	Mlig455_057193 {REF} {Length: 2096} {TRANSSPLICED} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=135.5]} {Human: ENSG00000116147, TNR, tenascin R, [Score=107, Expect=3e-25]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=102, Expect=1e-23]; ENSG00000085265, FCN1, ficolin 1, [Score=102, Expect=1e-24]} {Mouse: ENSMUSG00000015829, Tnr, tenascin R, [Score=108, Expect=4e-26]; ENSMUSG00000026725, Tnn, tenascin N, [Score=107, Expect=3e-25]} {Dmel: FBgn0003326, sca, scabrous, [Score=95.9, Expect=9e-22]} {Celegans: WBGene00017013, ensh-1, [Score=48.5, Expect=3e-06]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=89.0, Expect=1e-19]} {RNA1509_46373} {RNA1310_30846.1} {RNA815_24869}
5.	MligTC455_46366	186	3.88	Mlig455_058774	Neo: - Age: -		0.98	-	-	-	-	0.980	-	Mlig455_058774 {REF} {Length: 1243} {NoTransDecoderORF} {RNA1509_27726} {RNA1310_29978} {RNA815_47137}
6.	MligTC455_24711	46	0.96	Mlig455_015705	Neo: - Age: - Regeneration-upregulated BL: 6.967 Regeneration-enriched BL: 6.967		0.979	-	-	-	-	0.979	-	Mlig455_015705 {REF} {Length: 1380} {NoTransDecoderORF} {RNA1509_40708} {RNA1310_77515} {RNA815_26884}
7.	MligTC455_47428	11	0.24	Mlig455_042745	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_042745 {REF} {Length: 1016} {NoTransDecoderORF} {RNA1310_130213} {RNA815_33688}
8.	MligTC455_51638	17	0.35	Mlig455_025423	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_025423 {REF} {Length: 528} {NoTransDecoderORF} {RNA1509_54282} {RNA1310_113899}
9.	MligTC455_10217	100	2.08	Mlig455_042730	Neo: - Age: Down-Up-Down Region-enriched R2: 4.306/0.02912 Region-enriched R3: 3.318/0.03227		0.965	-	-	-	-	0.965	-	Mlig455_042730 {REF} {Length: 1398} {RNA1509_44180} {RNA1310_20217} {RNA815_8842}
10.	MligTC455_31986	10	0.21	Mlig455_032542, Mlig455_037929	Neo: - Age: -	MAP3K19	0.964	-	-	-	-	0.964	-	Mlig455_032542 {REF} {Length: 2537} {Pfam: Protein kinase domain [PF00069.27, score=192.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=136.8]; Fungal protein kinase [PF17667.3, score=25.3]; Ankyrin repeats (many copies) [PF13637.8, score=22.3]; ABC1 atypical kinase-like domain [PF03109.18, score=21.1]; Kinase-like [PF14531.8, score=18.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=132, Expect=7e-32]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=129, Expect=6e-30]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=135, Expect=2e-33]} {Dmel: FBgn0024329, Mekk1, [Score=124, Expect=1e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_4849_0_2, dd_Smed_v6_4849_0_2, [Score=117, Expect=8e-27]} {RNA1509_20120} {RNA1310_1544} {RNA815_2146} Mlig455_037929 {REF} {Length: 1598} {Pfam: Protein kinase domain [PF00069.27, score=32.1]; Ankyrin repeats (many copies) [PF13637.8, score=23.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=23.3]} {RNA1509_20120} {RNA1310_1544} {RNA815_39726}
11.	MligTC455_41248	1046	21.8	Mlig455_044640	Neo: - Age: logFC(26M/2M)=-0.313		0.962	-	-	-	-	0.962	-	Mlig455_044640 {REF} {Length: 2461} {Smed: dd_Smed_v6_13819_0_1, dd_Smed_v6_13819_0_1, [RH, Score=81.6, Expect=3e-16]} {RNA1509_8335} {RNA1310_4833.1, RNA1509_8335} {RNA1509_8335, RNA815_1430.1}
12.	MligTC455_40594	171	3.55	Mlig455_006568	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_006568 {REF} {Length: 1824} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13277} {RNA1310_51098} {RNA815_47536}
13.	MligTC455_05581	42	0.87	Mlig455_005887	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_005887 {REF} {Length: 906} {NoTransDecoderORF}
14.	MligTC455_12424	22	0.47	Mlig455_012135	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_012135 {REF} {Length: 1566} {TRANSSPLICED} {Pfam: BEN domain [PF10523.11, score=18.9]} {RNA1509_20962} {RNA1310_16852.1} {RNA815_8306.1}
15.	MligTC455_04417	8	0.18	Mlig455_014866	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.547		0.958	-	-	-	-	0.958	-	Mlig455_014866 {REF} {Length: 3595} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=123.6]} {RNA1509_7353} {RNA1310_1123.1} {RNA815_252.1}
16.	MligTC455_16225	212	4.42	Mlig455_019360	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.571		0.957	-	-	-	-	0.957	-	Mlig455_019360 {REF} {Length: 2345} {Smed: dd_Smed_v6_16150_0_1, dd_Smed_v6_16150_0_1, [RH, Score=93.2, Expect=5e-20]} {RNA1509_34395} {RNA1310_13154, RNA1509_34395} {RNA1509_34395, RNA815_10500}
17.	MligTC455_18292	790	16.46	Mlig455_013203	Neo: - Age: - Regeneration-downregulated R6: -1.857 Regeneration-depleted R6: -1.857	MEIG1	0.956	-	-	-	-	0.956	-	Mlig455_013203 {REF} {Length: 778} {TRANSSPLICED} {Pfam: Meiosis-expressed [PF15163.8, score=127.4]} {Human: ENSG00000197889, MEIG1, meiosis/spermiogenesis associated 1, [RH, Score=101, Expect=3e-29]} {Mouse: ENSMUSG00000026650, Meig1, meiosis expressed gene 1, [RH, Score=98.2, Expect=3e-28]} {Smed: dd_Smed_v6_4620_0_1, dd_Smed_v6_4620_0_1, [RH, Score=112, Expect=2e-34]} {RNA1509_36757} {RNA1310_45574} {RNA815_22417}
18.	MligTC455_52034	262	5.47	Mlig455_036049	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.456	FAM161A	0.955	-	-	-	-	0.955	-	Mlig455_036049 {REF} {Length: 4013} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=139.9]; Family of unknown function (DUF5641) [PF18701.3, score=27.0]} {Human: ENSG00000170264, FAM161A, FAM161A, centrosomal protein, [RH, Score=79.3, Expect=1e-14]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [Score=66.6, Expect=6e-11]; ENSMUSG00000049811, Fam161a, family with sequence similarity 161, member A, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [RH, Score=186, Expect=5e-50]} {RNA1509_10896} {RNA1310_9692.1} {RNA815_784}
19.	MligTC455_07930	10	0.21	Mlig455_026231	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.342	SLC16A2	0.954	-	-	-	-	0.954	-	Mlig455_026231 {REF} {Length: 1904} {Pfam: Major Facilitator Superfamily [PF07690.18, score=27.5]; Sugar (and other) transporter [PF00083.26, score=19.9]; Transmembrane secretion effector [PF05977.15, score=17.1]} {Human: ENSG00000147100, SLC16A2, solute carrier family 16 member 2, [Score=73.6, Expect=1e-14]} {Mouse: ENSMUSG00000033965, Slc16a2, solute carrier family 16 (monocarboxylic acid transporters), member 2, [Score=73.6, Expect=8e-15]; ENSMUSG00000019838, Slc16a10, solute carrier family 16 (monocarboxylic acid transporters), member 10, [Score=71.2, Expect=3e-14]} {Dmel: FBgn0001296, kar, karmoisin, [Score=103, Expect=4e-25]} {Celegans: WBGene00010834, mct-3, MonoCarboxylate Transporter family, [Score=57.0, Expect=2e-09]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=53.1, Expect=3e-08]} {RNA1509_13048} {RNA1310_12929} {RNA815_4877.1}
20.	MligTC455_55615	9	0.18	Mlig455_002937	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_002937 {REF} {Length: 373} {NoTransDecoderORF}
21.	MligTC455_19702	266	5.54	Mlig455_012020	Neo: - Age: -	TTC30B	0.952	-	-	-	-	0.952	-	Mlig455_012020 {REF} {Length: 2634} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF14559.8, score=73.1]; Tetratricopeptide repeat [PF07719.19, score=53.4]; Tetratricopeptide repeat [PF13424.8, score=39.7]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=38.5]; Tetratricopeptide repeat [PF13432.8, score=37.3]; Tetratricopeptide repeat [PF13174.8, score=31.6]; Tetratricopeptide repeat [PF00515.30, score=27.1]; Tetratricopeptide repeat [PF13428.8, score=26.0]; Tetratricopeptide repeat [PF13181.8, score=25.9]; Tetratricopeptide repeat [PF13176.8, score=21.7]; Tetratricopeptide repeat [PF13371.8, score=20.6]; Outer membrane lipoprotein [PF13525.8, score=20.3]; Putative TPR-like repeat [PF17004.7, score=20.1]} {Human: ENSG00000196659, TTC30B, tetratricopeptide repeat domain 30B, [Score=778, Expect=0.0]; ENSG00000197557, TTC30A, tetratricopeptide repeat domain 30A, [Score=771, Expect=0.0]} {Mouse: ENSMUSG00000075271, Ttc30a1, tetratricopeptide repeat domain 30A1, [Score=778, Expect=0.0]; ENSMUSG00000075273, Ttc30b, tetratricopeptide repeat domain 30B, [Score=778, Expect=0.0]; ENSMUSG00000075272, Ttc30a2, tetratricopeptide repeat domain 30A2, [Score=774, Expect=0.0]} {Dmel: FBgn0032470, CG5142, [Score=515, Expect=1e-175]} {Celegans: WBGene00001117, dyf-1, Tetratricopeptide repeat protein 30 homolog, [Score=568, Expect=0.0]} {Smed: dd_Smed_v6_8798_0_1, dd_Smed_v6_8798_0_1, [Score=865, Expect=0.0]} {RNA1509_12977} {RNA1310_15403, RNA1509_12977} {RNA1509_12977, RNA815_4297}
22.	MligTC455_22207	33	0.68	Mlig455_014911	Neo: - Age: -	ASIC1	0.952	-	-	-	-	0.952	-	Mlig455_014911 {REF} {Length: 2866} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=169.0]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=53.5, Expect=9e-07]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=53.1, Expect=1e-06]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=65.9, Expect=4e-11]} {Smed: dd_Smed_v6_16346_0_1, dd_Smed_v6_16346_0_1, [Score=111, Expect=2e-25]} {RNA1509_26567} {RNA1310_9266.1} {RNA815_6618}
23.	MligTC455_52048	1282	26.72	Mlig455_019679	Neo: - Age: logFC(26M/2M)=-0.701		0.952	-	-	-	-	0.952	-	Mlig455_019679 {REF} {Length: 2281} {Pfam: D-arabinono-1,4-lactone oxidase [PF04030.16, score=40.8]; FAD binding domain [PF01565.25, score=27.1]} {Mouse: ENSMUSG00000034450, Gulo, gulonolactone (L-) oxidase, [Score=55.1, Expect=1e-07]} {Smed: dd_Smed_v6_10292_0_1, dd_Smed_v6_10292_0_1, [Score=127, Expect=4e-31]} {RNA1509_25376, RNA1509_2896} {RNA1310_10814, RNA1509_25376} {RNA1509_25376, RNA815_3783}
24.	MligTC455_29740	15	0.32	Mlig455_001115	Neo: - Age: -	SLC5A8	0.951	-	-	-	-	0.951	-	Mlig455_001115 {REF} {Length: 1813} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=94.4]; Sodium:solute symporter family [PF00474.19, score=44.7]} {Human: ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=195, Expect=2e-53]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=195, Expect=2e-53]; ENSG00000148942, SLC5A12, solute carrier family 5 member 12, [Score=190, Expect=1e-51]} {Mouse: ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=194, Expect=2e-53]; ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=192, Expect=9e-53]} {Dmel: FBgn0034494, CG10444, [Score=162, Expect=2e-42]} {Celegans: WBGene00018716, F52H2.4, [Score=106, Expect=4e-24]} {Smed: dd_Smed_v6_13771_0_1, dd_Smed_v6_13771_0_1, [Score=162, Expect=2e-42]} {RNA1310_73267} {RNA815_24869}
25.	MligTC455_16150	267	5.56	Mlig455_057692	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.781	KLHDC8A	0.95	-	-	-	-	0.950	-	Mlig455_057692 {REF} {Length: 1684} {Pfam: Kelch motif [PF13964.8, score=56.8]; Kelch motif [PF01344.27, score=52.7]; Kelch motif [PF07646.17, score=36.4]; Galactose oxidase, central domain [PF13418.8, score=35.1]; Kelch motif [PF13854.8, score=27.6]} {Human: ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=58.5, Expect=3e-09]} {Mouse: ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_14507_0_1, dd_Smed_v6_14507_0_1, [RH, Score=209, Expect=3e-63]} {RNA1509_58319, RNA1509_58644} {RNA1310_20213, RNA1509_58319, RNA1509_58644} {RNA1509_58319, RNA1509_58644, RNA815_8052}