Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_09214 | 128 | 2.66 | Mlig455_017737 | Neo: - Age: Up-Down-Down |
Mlig455_017737 {REF} {Length: 2110} {Pfam: RNase H [PF00075.26, score=54.5]; Reverse transcriptase-like [PF13456.8, score=23.8]} {RNA1509_50041} {RNA1310_12742} {RNA815_252.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -7.942 | 2.039 | 0.05596 | 0.54900 | |
RegionR2 | 2.422 | 2.039 | 0.18295 | 0.53413 | |
RegionR3 | 2.027 | 2.039 | 0.01208 | 0.17357 | |
RegionR4 | -0.271 | 2.039 | 0.45555 | 0.78383 | |
RegionR5 | -0.172 | 2.039 | 0.56894 | 0.92782 | |
RegionR6 | 1.649 | 2.039 | 0.07994 | 0.52184 | |
RegionR7 | 0.804 | 2.039 | 0.88379 | 1.00000 | |
RegionR8 | 1.483 | 2.039 | 0.77644 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 1.893 | 2.039 | 0.99997 | 1.00000 | |
RegenerationR2 | -4.39 | 2.039 | 0.00096 | 0.04558 | |
RegenerationR3 | -4.237 | 2.039 | 0.00086 | 0.04511 | |
RegenerationR4 | -3.19 | 2.039 | 0.00745 | 0.12678 | |
RegenerationR5 | -3.39 | 2.039 | 0.00378 | 0.10990 | |
RegenerationR6 | -3.912 | 2.039 | 0.00981 | 0.12201 | |
RegenerationBL | -4.702 | 2.039 | 0.03024 | 0.19388 | |
RegenerationTP | -4.565 | 2.039 | 0.04528 | 0.35345 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_09214 | 128 | 2.66 | Mlig455_017737 | Neo: - Age: Up-Down-Down |
3 | 1.000 | 1.000 | 1.000 | - | - | - | Mlig455_017737 {REF} {Length: 2110} {Pfam: RNase H [PF00075.26, score=54.5]; Reverse transcriptase-like [PF13456.8, score=23.8]} {RNA1509_50041} {RNA1310_12742} {RNA815_252.1} | |
2. | MligTC455_06102 | 9 | 0.19 | Mlig455_016363 | Neo: - Age: - |
1 | - | - | 1.000 | - | - | - | Mlig455_016363 {REF} {Length: 711} {NoTransDecoderORF} {RNA1310_76160} {RNA815_19899} | |
3. | MligTC455_14505 | 77 | 1.61 | Mlig455_049200 | Neo: - Age: - Region-enriched R2: 7.035/0.00040 |
HEY2 | 1 | - | - | 1.000 | - | - | - | Mlig455_049200 {REF} {Length: 1539} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=64.5]; Hairy Orange [PF07527.15, score=40.4]} {Human: ENSG00000135547, HEY2, hes related family bHLH transcription factor with YRPW motif 2, [Score=133, Expect=3e-36]; ENSG00000164683, HEY1, hes related family bHLH transcription factor with YRPW motif 1, [Score=132, Expect=4e-37]; ENSG00000163909, HEYL, hes related family bHLH transcription factor with YRPW motif-like, [Score=127, Expect=5e-34]} {Mouse: ENSMUSG00000019789, Hey2, hairy/enhancer-of-split related with YRPW motif 2, [Score=135, Expect=6e-37]; ENSMUSG00000040289, Hey1, hairy/enhancer-of-split related with YRPW motif 1, [Score=130, Expect=3e-35]} {Dmel: FBgn0027788, Hey, Hairy/E(spl)-related with YRPW motif, [Score=106, Expect=7e-26]} {Celegans: WBGene00003008, lin-22, Lin-22, [Score=48.1, Expect=1e-06]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=90.5, Expect=1e-20]} {RNA1310_79462} {RNA815_41474} |
4. | MligTC455_20335 | 30 | 0.62 | Mlig455_003579 | Neo: - Age: - |
1 | - | - | 1.000 | - | - | - | Mlig455_003579 {REF} {Length: 3608} {RNA1310_50785} {RNA815_44116} | |
5. | MligTC455_27535 | 13 | 0.27 | Mlig455_048809 | Neo: - |
PPP1R16B | 1 | - | - | 1.000 | - | - | - | Mlig455_048809 {REF} {Length: 2464} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.6]; Ankyrin repeat [PF00023.32, score=86.5]; Ankyrin repeats (many copies) [PF13637.8, score=86.4]; Ankyrin repeats (many copies) [PF13857.8, score=75.5]; Ankyrin repeat [PF13606.8, score=75.2]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=286, Expect=1e-88]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=280, Expect=9e-87]; ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=278, Expect=2e-86]} {Dmel: FBgn0036801, MYPT-75D, [Score=291, Expect=2e-90]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=228, Expect=7e-68]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=311, Expect=4e-99]} {RNA1310_118235} |
6. | MligTC455_34000 | 7 | 0.15 | Mlig455_065873 | Neo: - |
1 | - | - | 1.000 | - | - | - | Mlig455_065873 {REF} {Length: 4538} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=234.9]; Ankyrin repeats (many copies) [PF13637.8, score=196.7]; Ankyrin repeats (many copies) [PF13857.8, score=102.7]; Ankyrin repeat [PF13606.8, score=88.4]; Family of unknown function (DUF6189) [PF19688.1, score=70.7]; Phage protein GP46 [PF07409.14, score=58.0]; 3,4-dihydroxy-2-butanone 4-phosphate synthase [PF00926.21, score=53.5]; Ankyrin repeat [PF00023.32, score=35.4]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=63.2, Expect=9e-10]} {Smed: dd_Smed_v6_14207_0_1, dd_Smed_v6_14207_0_1, [Score=51.6, Expect=3e-06]} {RNA1509_39348, RNA1509_57845} {RNA1310_21309.1, RNA1509_57845} {RNA1509_57845, RNA815_2397.1} | |
7. | MligTC455_51122 | 24 | 0.51 | Mlig455_018126 | Neo: - Age: - |
1 | - | - | 1.000 | - | - | - | Mlig455_018126 {REF} {Length: 1085} {RNA1509_54792} {RNA1310_88282} | |
8. | MligTC455_51662 | 15 | 0.31 | Mlig455_012481 | Neo: - Age: - |
1 | - | - | 1.000 | - | - | - | Mlig455_012481 {REF} {Length: 1671} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.7]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [Score=51.2, Expect=8e-07]} {Smed: dd_Smed_v6_25466_0_1, dd_Smed_v6_25466_0_1, [Score=47.4, Expect=8e-06]} {RNA1310_90421} | |
9. | MligTC455_14371 | 14 | 0.28 | Mlig455_048246 | Neo: - Age: - |
0.999 | - | - | 0.999 | - | - | - | Mlig455_048246 {REF} {Length: 1448} {Pfam: Sulfotransferase domain [PF19798.1, score=52.9]} {RNA1310_42847} {RNA815_35707} | |
10. | MligTC455_52180 | 49 | 1.02 | Mlig455_026542 | Neo: - Age: - |
0.995 | - | - | 0.995 | - | - | - | Mlig455_026542 {REF} {Length: 1858} {NoTransDecoderORF} {RNA1509_47901} {RNA1310_42492.2} {RNA815_28442} | |
11. | MligTC455_10481 | 52 | 1.09 | Mlig455_026389, Mlig455_052615, Mlig455_052659 | Neo: - Age: - |
0.994 | - | - | 0.994 | - | - | - | Mlig455_026389 {REF} {Length: 635} {Pfam: Sleepless protein [PF17064.7, score=21.1]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=8e-19]} {RNA1310_62382} Mlig455_052615 {REF} {Length: 1127} {Pfam: Sleepless protein [PF17064.7, score=23.5]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=9e-19]} {RNA1310_62382} {RNA815_64157} Mlig455_052659 {REF} {Length: 533} {Pfam: Sleepless protein [PF17064.7, score=23.5]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=9e-19]} {RNA1310_62382} |
|
12. | MligTC455_37176 | 16 | 0.34 | Mlig455_066756 | Neo: - Age: - |
0.991 | - | - | 0.991 | - | - | - | Mlig455_066756 {REF} {Length: 339} {RNA1509_42914} {RNA1310_99471} {RNA815_64986} | |
13. | MligTC455_16133 | 87 | 1.82 | Mlig455_070159 | Neo: - Age: - |
0.99 | - | - | 0.990 | - | - | - | Mlig455_070159 {REF} {Length: 813} {Pfam: DNA polymerase processivity factor (UL42) [PF02282.18, score=22.9]} {RNA1310_115465} | |
14. | MligTC455_09000 | 8 | 0.17 | Mlig455_035922 | Neo: - Age: - |
0.989 | - | - | 0.989 | - | - | - | Mlig455_035922 {REF} {Length: 1657} {RNA1310_49348} {RNA815_52779} | |
15. | MligTC455_18515 | 24 | 0.5 | Mlig455_008323 | Neo: - Age: - |
FARP2 | 0.989 | - | - | 0.989 | - | - | - | Mlig455_008323 {REF} {Length: 4459} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=79.0]; FERM N-terminal domain [PF09379.12, score=61.5]; FERM central domain [PF00373.20, score=47.5]; FERM adjacent (FA) [PF08736.13, score=34.0]} {Human: ENSG00000006607, FARP2, FERM, ARH/RhoGEF and pleckstrin domain protein 2, [RH, Score=326, Expect=5e-99]; ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [RH, Score=317, Expect=3e-94]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [RH, Score=330, Expect=3e-99]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=367, Expect=1e-117]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=350, Expect=4e-104]} {Smed: dd_Smed_v6_5600_0_1, dd_Smed_v6_5600_0_1, [Score=433, Expect=5e-131]} {RNA1509_50345} {RNA1310_4844, RNA1509_50345} {RNA1509_50345, RNA815_16713} |
16. | MligTC455_37489 | 38 | 0.8 | Mlig455_063956 | Neo: - Age: - |
0.989 | - | - | 0.989 | - | - | - | Mlig455_063956 {REF} {Length: 4044} {RNA1310_69299} {RNA815_47623} | |
17. | MligTC455_25805 | 30 | 0.63 | Mlig455_044209 | Neo: - Age: - |
0.987 | - | - | 0.987 | - | - | - | Mlig455_044209 {REF} {Length: 5863} {RNA1509_55535} {RNA1310_78838.1} {RNA815_24119.1} | |
18. | MligTC455_16785 | 99 | 2.06 | Mlig455_061289, Mlig455_061323, Mlig455_062675 | Neo: - Age: - |
0.982 | - | - | 0.982 | - | - | - | Mlig455_061289 {REF} {Length: 2624} {RNA1509_55425} {RNA1310_21283, RNA1509_55425} {RNA1509_55425, RNA815_20966} Mlig455_061323 {REF} {Length: 2546} {RNA1509_55425} {RNA1310_21283} {RNA815_20966} Mlig455_062675 {REF} {Length: 2625} {RNA1509_55425} {RNA1310_21283} {RNA815_20966} |
|
19. | MligTC455_29400 | 63 | 1.31 | Mlig455_057781 | Neo: - Age: - |
0.978 | - | - | 0.978 | - | - | - | Mlig455_057781 {REF} {Length: 1746} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_51690} {RNA815_64986} | |
20. | MligTC455_16760 | 96 | 2 | Mlig455_039271 | Neo: - Age: Down-Up-Down Region-enriched R2: 4.283/0.01201 |
CDKL2 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_039271 {REF} {Length: 4664} {Pfam: Protein kinase domain [PF00069.27, score=242.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.9]; ABC1 atypical kinase-like domain [PF03109.18, score=17.9]} {Human: ENSG00000138769, CDKL2, cyclin dependent kinase like 2, [RH, Score=445, Expect=3e-150]} {Mouse: ENSMUSG00000029403, Cdkl2, cyclin-dependent kinase-like 2 (CDC2-related kinase), [RH, Score=427, Expect=3e-143]} {Dmel: FBgn0031730, CG7236, [Score=332, Expect=3e-108]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=337, Expect=1e-111]} {Smed: dd_Smed_v6_17162_0_1, dd_Smed_v6_17162_0_1, [RH, Score=412, Expect=2e-140]} {RNA1509_31808} {RNA1310_11068.1} {RNA815_5716} |
21. | MligTC455_43009 | 84 | 1.76 | Mlig455_028315 | Neo: - Age: - |
NKX1-1 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_028315 {REF} {Length: 3063} {Pfam: Homeodomain [PF00046.31, score=75.2]} {Human: ENSG00000235608, NKX1-1, NK1 homeobox 1, [Score=140, Expect=6e-38]; ENSG00000229544, NKX1-2, NK1 homeobox 2, [Score=134, Expect=3e-36]} {Mouse: ENSMUSG00000029112, Nkx1-1, NK1 homeobox 1, [Score=146, Expect=2e-40]} {Dmel: FBgn0002941, slou, slouch, [RH, Score=152, Expect=2e-41]} {Celegans: WBGene00000428, ceh-1, Homeobox protein ceh-1, [Score=132, Expect=9e-38]} {Smed: dd_Smed_v6_19327_0_1, dd_Smed_v6_19327_0_1, [Score=145, Expect=1e-40]} {RNA1310_40325} {RNA815_61269} |
22. | MligTC455_06627 | 26 | 0.54 | Mlig455_068129 | Neo: - Age: - |
0.964 | - | - | 0.964 | - | - | - | Mlig455_068129 {REF} {Length: 497} {NoTransDecoderORF} {RNA1310_82453} | |
23. | MligTC455_16175 | 64 | 1.34 | Mlig455_047192 | Neo: - Age: - |
GCM1 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_047192 {REF} {Length: 2352} {Pfam: GCM motif protein [PF03615.17, score=223.0]} {Human: ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=196, Expect=4e-57]; ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=192, Expect=1e-55]; ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=188, Expect=1e-53]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=229, Expect=3e-69]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=186, Expect=3e-54]} {RNA1509_58813} {RNA1310_66943} {RNA815_43872} |
24. | MligTC455_37687 | 131 | 2.72 | Mlig455_057270 | Neo: - Age: - |
0.964 | - | - | 0.964 | - | - | - | Mlig455_057270 {REF} {Length: 2140} {NoTransDecoderORF} {RNA1509_41398} {RNA1310_49551} {RNA815_43706} | |
25. | MligTC455_28070 | 31 | 0.65 | Mlig455_003961 | Neo: - Age: Up-Down-Down |
0.961 | - | - | 0.961 | - | - | - | Mlig455_003961 {REF} {Length: 2138} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_10847.1} {RNA815_23623} | |
26. | MligTC455_19759 | 18 | 0.39 | Mlig455_002694, Mlig455_002710 | Neo: - Age: - |
0.955 | - | - | 0.955 | - | - | - | Mlig455_002694 {REF} {Length: 1408} {RNA1310_38437} {RNA815_40458} Mlig455_002710 {REF} {Length: 1745} {RNA1310_38437} {RNA815_40458} |