Data search


search
Exact
Search

Results for MligTC455_51662

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51662 15 0.31 Mlig455_012481

Neo: -

Age: -

Mlig455_012481 {REF} {Length: 1671} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.7]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [Score=51.2, Expect=8e-07]} {Smed: dd_Smed_v6_25466_0_1, dd_Smed_v6_25466_0_1, [Score=47.4, Expect=8e-06]} {RNA1310_90421}

Cumulative graph for MligTC455_51662

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_51662

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51662 15 0.31 Mlig455_012481

Neo: -

Age: -

2 - - 1.000 - 1.000 - Mlig455_012481 {REF} {Length: 1671} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.7]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [Score=51.2, Expect=8e-07]} {Smed: dd_Smed_v6_25466_0_1, dd_Smed_v6_25466_0_1, [Score=47.4, Expect=8e-06]} {RNA1310_90421}
2. MligTC455_06102 9 0.19 Mlig455_016363

Neo: -

Age: -

1 - - 1.000 - - - Mlig455_016363 {REF} {Length: 711} {NoTransDecoderORF} {RNA1310_76160} {RNA815_19899}
3. MligTC455_09214 128 2.66 Mlig455_017737

Neo: -

Age: Up-Down-Down

1 - - 1.000 - - - Mlig455_017737 {REF} {Length: 2110} {Pfam: RNase H [PF00075.26, score=54.5]; Reverse transcriptase-like [PF13456.8, score=23.8]} {RNA1509_50041} {RNA1310_12742} {RNA815_252.1}
4. MligTC455_14505 77 1.61 Mlig455_049200

Neo: -

Age: -

Region-enriched R2: 7.035/0.00040

HEY2 1 - - 1.000 - - - Mlig455_049200 {REF} {Length: 1539} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=64.5]; Hairy Orange [PF07527.15, score=40.4]} {Human: ENSG00000135547, HEY2, hes related family bHLH transcription factor with YRPW motif 2, [Score=133, Expect=3e-36]; ENSG00000164683, HEY1, hes related family bHLH transcription factor with YRPW motif 1, [Score=132, Expect=4e-37]; ENSG00000163909, HEYL, hes related family bHLH transcription factor with YRPW motif-like, [Score=127, Expect=5e-34]} {Mouse: ENSMUSG00000019789, Hey2, hairy/enhancer-of-split related with YRPW motif 2, [Score=135, Expect=6e-37]; ENSMUSG00000040289, Hey1, hairy/enhancer-of-split related with YRPW motif 1, [Score=130, Expect=3e-35]} {Dmel: FBgn0027788, Hey, Hairy/E(spl)-related with YRPW motif, [Score=106, Expect=7e-26]} {Celegans: WBGene00003008, lin-22, Lin-22, [Score=48.1, Expect=1e-06]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=90.5, Expect=1e-20]} {RNA1310_79462} {RNA815_41474}
5. MligTC455_20335 30 0.62 Mlig455_003579

Neo: -

Age: -

1 - - 1.000 - - - Mlig455_003579 {REF} {Length: 3608} {RNA1310_50785} {RNA815_44116}
6. MligTC455_27535 13 0.27 Mlig455_048809

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=1.142

PPP1R16B 1 - - 1.000 - - - Mlig455_048809 {REF} {Length: 2464} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.6]; Ankyrin repeat [PF00023.32, score=86.5]; Ankyrin repeats (many copies) [PF13637.8, score=86.4]; Ankyrin repeats (many copies) [PF13857.8, score=75.5]; Ankyrin repeat [PF13606.8, score=75.2]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=286, Expect=1e-88]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=280, Expect=9e-87]; ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=278, Expect=2e-86]} {Dmel: FBgn0036801, MYPT-75D, [Score=291, Expect=2e-90]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=228, Expect=7e-68]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=311, Expect=4e-99]} {RNA1310_118235}
7. MligTC455_34000 7 0.15 Mlig455_065873

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.595

1 - - 1.000 - - - Mlig455_065873 {REF} {Length: 4538} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=234.9]; Ankyrin repeats (many copies) [PF13637.8, score=196.7]; Ankyrin repeats (many copies) [PF13857.8, score=102.7]; Ankyrin repeat [PF13606.8, score=88.4]; Family of unknown function (DUF6189) [PF19688.1, score=70.7]; Phage protein GP46 [PF07409.14, score=58.0]; 3,4-dihydroxy-2-butanone 4-phosphate synthase [PF00926.21, score=53.5]; Ankyrin repeat [PF00023.32, score=35.4]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=63.2, Expect=9e-10]} {Smed: dd_Smed_v6_14207_0_1, dd_Smed_v6_14207_0_1, [Score=51.6, Expect=3e-06]} {RNA1509_39348, RNA1509_57845} {RNA1310_21309.1, RNA1509_57845} {RNA1509_57845, RNA815_2397.1}
8. MligTC455_51122 24 0.51 Mlig455_018126

Neo: -

Age: -

1 - - 1.000 - - - Mlig455_018126 {REF} {Length: 1085} {RNA1509_54792} {RNA1310_88282}
9. MligTC455_14371 14 0.28 Mlig455_048246

Neo: -

Age: -

0.999 - - 0.999 - - - Mlig455_048246 {REF} {Length: 1448} {Pfam: Sulfotransferase domain [PF19798.1, score=52.9]} {RNA1310_42847} {RNA815_35707}
10. MligTC455_52180 49 1.02 Mlig455_026542

Neo: -

Age: -

0.995 - - 0.995 - - - Mlig455_026542 {REF} {Length: 1858} {NoTransDecoderORF} {RNA1509_47901} {RNA1310_42492.2} {RNA815_28442}
11. MligTC455_10481 52 1.09 Mlig455_026389, Mlig455_052615, Mlig455_052659

Neo: -

Age: -

0.994 - - 0.994 - - -

Mlig455_026389 {REF} {Length: 635} {Pfam: Sleepless protein [PF17064.7, score=21.1]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=8e-19]} {RNA1310_62382}

Mlig455_052615 {REF} {Length: 1127} {Pfam: Sleepless protein [PF17064.7, score=23.5]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=9e-19]} {RNA1310_62382} {RNA815_64157}

Mlig455_052659 {REF} {Length: 533} {Pfam: Sleepless protein [PF17064.7, score=23.5]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=9e-19]} {RNA1310_62382}
12. MligTC455_37176 16 0.34 Mlig455_066756

Neo: -

Age: -

0.991 - - 0.991 - - - Mlig455_066756 {REF} {Length: 339} {RNA1509_42914} {RNA1310_99471} {RNA815_64986}
13. MligTC455_16133 87 1.82 Mlig455_070159

Neo: -

Age: -

0.99 - - 0.990 - - - Mlig455_070159 {REF} {Length: 813} {Pfam: DNA polymerase processivity factor (UL42) [PF02282.18, score=22.9]} {RNA1310_115465}
14. MligTC455_09000 8 0.17 Mlig455_035922

Neo: -

Age: -

0.989 - - 0.989 - - - Mlig455_035922 {REF} {Length: 1657} {RNA1310_49348} {RNA815_52779}
15. MligTC455_18515 24 0.5 Mlig455_008323

Neo: -

Age: -

FARP2 0.989 - - 0.989 - - - Mlig455_008323 {REF} {Length: 4459} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=79.0]; FERM N-terminal domain [PF09379.12, score=61.5]; FERM central domain [PF00373.20, score=47.5]; FERM adjacent (FA) [PF08736.13, score=34.0]} {Human: ENSG00000006607, FARP2, FERM, ARH/RhoGEF and pleckstrin domain protein 2, [RH, Score=326, Expect=5e-99]; ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [RH, Score=317, Expect=3e-94]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [RH, Score=330, Expect=3e-99]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=367, Expect=1e-117]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=350, Expect=4e-104]} {Smed: dd_Smed_v6_5600_0_1, dd_Smed_v6_5600_0_1, [Score=433, Expect=5e-131]} {RNA1509_50345} {RNA1310_4844, RNA1509_50345} {RNA1509_50345, RNA815_16713}
16. MligTC455_37489 38 0.8 Mlig455_063956

Neo: -

Age: -

0.989 - - 0.989 - - - Mlig455_063956 {REF} {Length: 4044} {RNA1310_69299} {RNA815_47623}
17. MligTC455_25805 30 0.63 Mlig455_044209

Neo: -

Age: -

0.987 - - 0.987 - - - Mlig455_044209 {REF} {Length: 5863} {RNA1509_55535} {RNA1310_78838.1} {RNA815_24119.1}
18. MligTC455_16785 99 2.06 Mlig455_061289, Mlig455_061323, Mlig455_062675

Neo: -

Age: -

0.982 - - 0.982 - - -

Mlig455_061289 {REF} {Length: 2624} {RNA1509_55425} {RNA1310_21283, RNA1509_55425} {RNA1509_55425, RNA815_20966}

Mlig455_061323 {REF} {Length: 2546} {RNA1509_55425} {RNA1310_21283} {RNA815_20966}

Mlig455_062675 {REF} {Length: 2625} {RNA1509_55425} {RNA1310_21283} {RNA815_20966}
19. MligTC455_29400 63 1.31 Mlig455_057781

Neo: -

Age: -

0.978 - - 0.978 - - - Mlig455_057781 {REF} {Length: 1746} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_51690} {RNA815_64986}
20. MligTC455_16760 96 2 Mlig455_039271

Neo: -

Age: Down-Up-Down

Region-enriched R2: 4.283/0.01201

CDKL2 0.967 - - 0.967 - - - Mlig455_039271 {REF} {Length: 4664} {Pfam: Protein kinase domain [PF00069.27, score=242.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.9]; ABC1 atypical kinase-like domain [PF03109.18, score=17.9]} {Human: ENSG00000138769, CDKL2, cyclin dependent kinase like 2, [RH, Score=445, Expect=3e-150]} {Mouse: ENSMUSG00000029403, Cdkl2, cyclin-dependent kinase-like 2 (CDC2-related kinase), [RH, Score=427, Expect=3e-143]} {Dmel: FBgn0031730, CG7236, [Score=332, Expect=3e-108]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=337, Expect=1e-111]} {Smed: dd_Smed_v6_17162_0_1, dd_Smed_v6_17162_0_1, [RH, Score=412, Expect=2e-140]} {RNA1509_31808} {RNA1310_11068.1} {RNA815_5716}
21. MligTC455_43009 84 1.76 Mlig455_028315

Neo: -

Age: -

NKX1-1 0.967 - - 0.967 - - - Mlig455_028315 {REF} {Length: 3063} {Pfam: Homeodomain [PF00046.31, score=75.2]} {Human: ENSG00000235608, NKX1-1, NK1 homeobox 1, [Score=140, Expect=6e-38]; ENSG00000229544, NKX1-2, NK1 homeobox 2, [Score=134, Expect=3e-36]} {Mouse: ENSMUSG00000029112, Nkx1-1, NK1 homeobox 1, [Score=146, Expect=2e-40]} {Dmel: FBgn0002941, slou, slouch, [RH, Score=152, Expect=2e-41]} {Celegans: WBGene00000428, ceh-1, Homeobox protein ceh-1, [Score=132, Expect=9e-38]} {Smed: dd_Smed_v6_19327_0_1, dd_Smed_v6_19327_0_1, [Score=145, Expect=1e-40]} {RNA1310_40325} {RNA815_61269}
22. MligTC455_06627 26 0.54 Mlig455_068129

Neo: -

Age: -

0.964 - - 0.964 - - - Mlig455_068129 {REF} {Length: 497} {NoTransDecoderORF} {RNA1310_82453}
23. MligTC455_16175 64 1.34 Mlig455_047192

Neo: -

Age: -

GCM1 0.964 - - 0.964 - - - Mlig455_047192 {REF} {Length: 2352} {Pfam: GCM motif protein [PF03615.17, score=223.0]} {Human: ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=196, Expect=4e-57]; ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=192, Expect=1e-55]; ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=188, Expect=1e-53]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=229, Expect=3e-69]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=186, Expect=3e-54]} {RNA1509_58813} {RNA1310_66943} {RNA815_43872}
24. MligTC455_37687 131 2.72 Mlig455_057270

Neo: -

Age: -

0.964 - - 0.964 - - - Mlig455_057270 {REF} {Length: 2140} {NoTransDecoderORF} {RNA1509_41398} {RNA1310_49551} {RNA815_43706}
25. MligTC455_28070 31 0.65 Mlig455_003961

Neo: -

Age: Up-Down-Down

0.961 - - 0.961 - - - Mlig455_003961 {REF} {Length: 2138} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_10847.1} {RNA815_23623}
26. MligTC455_19759 18 0.39 Mlig455_002694, Mlig455_002710

Neo: -

Age: -

0.955 - - 0.955 - - -

Mlig455_002694 {REF} {Length: 1408} {RNA1310_38437} {RNA815_40458}

Mlig455_002710 {REF} {Length: 1745} {RNA1310_38437} {RNA815_40458}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA