Data search


search
Exact
Search

Results for MligTC455_51122

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51122 24 0.51 Mlig455_018126

Neo: -

Age: -

Mlig455_018126 {REF} {Length: 1085} {RNA1509_54792} {RNA1310_88282}

Cumulative graph for MligTC455_51122

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.795 0.71 1.00000 1.00000
RegionR2 1.045 0.71 0.65471 0.98825
RegionR3 -1.059 0.71 1.00000 1.00000
RegionR4 -0.138 0.71 1.00000 1.00000
RegionR5 -0.952 0.71 1.00000 1.00000
RegionR6 1.236 0.71 0.39488 0.96843
RegionR7 -0.652 0.71 1.00000 1.00000
RegionR8 -0.276 0.71 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.339 0.71 1.00000 1.00000
RegenerationR2 0.951 0.71 0.72782 0.96485
RegenerationR3 2.276 0.71 0.49291 0.85506
RegenerationR4 -0.844 0.71 1.00000 1.00000
RegenerationR5 1.585 0.71 0.46790 0.84096
RegenerationR6 1.915 0.71 0.55622 0.84287
RegenerationBL 1.719 0.71 0.59715 0.94499
RegenerationTP 2.352 0.71 0.60244 0.96215


Genes with expression patterns similar to MligTC455_51122

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51122 24 0.51 Mlig455_018126

Neo: -

Age: -

2 - - 1.000 - 1.000 - Mlig455_018126 {REF} {Length: 1085} {RNA1509_54792} {RNA1310_88282}
2. MligTC455_16785 99 2.06 Mlig455_061289, Mlig455_061323, Mlig455_062675

Neo: -

Age: -

1.726 - - 0.982 - 0.744 -

Mlig455_061289 {REF} {Length: 2624} {RNA1509_55425} {RNA1310_21283, RNA1509_55425} {RNA1509_55425, RNA815_20966}

Mlig455_061323 {REF} {Length: 2546} {RNA1509_55425} {RNA1310_21283} {RNA815_20966}

Mlig455_062675 {REF} {Length: 2625} {RNA1509_55425} {RNA1310_21283} {RNA815_20966}
3. MligTC455_06627 26 0.54 Mlig455_068129

Neo: -

Age: -

1.706 - - 0.964 - 0.742 - Mlig455_068129 {REF} {Length: 497} {NoTransDecoderORF} {RNA1310_82453}
4. MligTC455_06102 9 0.19 Mlig455_016363

Neo: -

Age: -

1 - - 1.000 - - - Mlig455_016363 {REF} {Length: 711} {NoTransDecoderORF} {RNA1310_76160} {RNA815_19899}
5. MligTC455_09214 128 2.66 Mlig455_017737

Neo: -

Age: Up-Down-Down

1 - - 1.000 - - - Mlig455_017737 {REF} {Length: 2110} {Pfam: RNase H [PF00075.26, score=54.5]; Reverse transcriptase-like [PF13456.8, score=23.8]} {RNA1509_50041} {RNA1310_12742} {RNA815_252.1}
6. MligTC455_14505 77 1.61 Mlig455_049200

Neo: -

Age: -

Region-enriched R2: 7.035/0.00040

HEY2 1 - - 1.000 - - - Mlig455_049200 {REF} {Length: 1539} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=64.5]; Hairy Orange [PF07527.15, score=40.4]} {Human: ENSG00000135547, HEY2, hes related family bHLH transcription factor with YRPW motif 2, [Score=133, Expect=3e-36]; ENSG00000164683, HEY1, hes related family bHLH transcription factor with YRPW motif 1, [Score=132, Expect=4e-37]; ENSG00000163909, HEYL, hes related family bHLH transcription factor with YRPW motif-like, [Score=127, Expect=5e-34]} {Mouse: ENSMUSG00000019789, Hey2, hairy/enhancer-of-split related with YRPW motif 2, [Score=135, Expect=6e-37]; ENSMUSG00000040289, Hey1, hairy/enhancer-of-split related with YRPW motif 1, [Score=130, Expect=3e-35]} {Dmel: FBgn0027788, Hey, Hairy/E(spl)-related with YRPW motif, [Score=106, Expect=7e-26]} {Celegans: WBGene00003008, lin-22, Lin-22, [Score=48.1, Expect=1e-06]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=90.5, Expect=1e-20]} {RNA1310_79462} {RNA815_41474}
7. MligTC455_20335 30 0.62 Mlig455_003579

Neo: -

Age: -

1 - - 1.000 - - - Mlig455_003579 {REF} {Length: 3608} {RNA1310_50785} {RNA815_44116}
8. MligTC455_27535 13 0.27 Mlig455_048809

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=1.142

PPP1R16B 1 - - 1.000 - - - Mlig455_048809 {REF} {Length: 2464} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.6]; Ankyrin repeat [PF00023.32, score=86.5]; Ankyrin repeats (many copies) [PF13637.8, score=86.4]; Ankyrin repeats (many copies) [PF13857.8, score=75.5]; Ankyrin repeat [PF13606.8, score=75.2]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=286, Expect=1e-88]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=280, Expect=9e-87]; ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=278, Expect=2e-86]} {Dmel: FBgn0036801, MYPT-75D, [Score=291, Expect=2e-90]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=228, Expect=7e-68]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=311, Expect=4e-99]} {RNA1310_118235}
9. MligTC455_34000 7 0.15 Mlig455_065873

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.595

1 - - 1.000 - - - Mlig455_065873 {REF} {Length: 4538} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=234.9]; Ankyrin repeats (many copies) [PF13637.8, score=196.7]; Ankyrin repeats (many copies) [PF13857.8, score=102.7]; Ankyrin repeat [PF13606.8, score=88.4]; Family of unknown function (DUF6189) [PF19688.1, score=70.7]; Phage protein GP46 [PF07409.14, score=58.0]; 3,4-dihydroxy-2-butanone 4-phosphate synthase [PF00926.21, score=53.5]; Ankyrin repeat [PF00023.32, score=35.4]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=63.2, Expect=9e-10]} {Smed: dd_Smed_v6_14207_0_1, dd_Smed_v6_14207_0_1, [Score=51.6, Expect=3e-06]} {RNA1509_39348, RNA1509_57845} {RNA1310_21309.1, RNA1509_57845} {RNA1509_57845, RNA815_2397.1}
10. MligTC455_51662 15 0.31 Mlig455_012481

Neo: -

Age: -

1 - - 1.000 - - - Mlig455_012481 {REF} {Length: 1671} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.7]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [Score=51.2, Expect=8e-07]} {Smed: dd_Smed_v6_25466_0_1, dd_Smed_v6_25466_0_1, [Score=47.4, Expect=8e-06]} {RNA1310_90421}
11. MligTC455_14371 14 0.28 Mlig455_048246

Neo: -

Age: -

0.999 - - 0.999 - - - Mlig455_048246 {REF} {Length: 1448} {Pfam: Sulfotransferase domain [PF19798.1, score=52.9]} {RNA1310_42847} {RNA815_35707}
12. MligTC455_52180 49 1.02 Mlig455_026542

Neo: -

Age: -

0.995 - - 0.995 - - - Mlig455_026542 {REF} {Length: 1858} {NoTransDecoderORF} {RNA1509_47901} {RNA1310_42492.2} {RNA815_28442}
13. MligTC455_10481 52 1.09 Mlig455_026389, Mlig455_052615, Mlig455_052659

Neo: -

Age: -

0.994 - - 0.994 - - -

Mlig455_026389 {REF} {Length: 635} {Pfam: Sleepless protein [PF17064.7, score=21.1]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=8e-19]} {RNA1310_62382}

Mlig455_052615 {REF} {Length: 1127} {Pfam: Sleepless protein [PF17064.7, score=23.5]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=9e-19]} {RNA1310_62382} {RNA815_64157}

Mlig455_052659 {REF} {Length: 533} {Pfam: Sleepless protein [PF17064.7, score=23.5]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=78.6, Expect=9e-19]} {RNA1310_62382}
14. MligTC455_37176 16 0.34 Mlig455_066756

Neo: -

Age: -

0.991 - - 0.991 - - - Mlig455_066756 {REF} {Length: 339} {RNA1509_42914} {RNA1310_99471} {RNA815_64986}
15. MligTC455_16133 87 1.82 Mlig455_070159

Neo: -

Age: -

0.99 - - 0.990 - - - Mlig455_070159 {REF} {Length: 813} {Pfam: DNA polymerase processivity factor (UL42) [PF02282.18, score=22.9]} {RNA1310_115465}
16. MligTC455_09000 8 0.17 Mlig455_035922

Neo: -

Age: -

0.989 - - 0.989 - - - Mlig455_035922 {REF} {Length: 1657} {RNA1310_49348} {RNA815_52779}
17. MligTC455_18515 24 0.5 Mlig455_008323

Neo: -

Age: -

FARP2 0.989 - - 0.989 - - - Mlig455_008323 {REF} {Length: 4459} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=79.0]; FERM N-terminal domain [PF09379.12, score=61.5]; FERM central domain [PF00373.20, score=47.5]; FERM adjacent (FA) [PF08736.13, score=34.0]} {Human: ENSG00000006607, FARP2, FERM, ARH/RhoGEF and pleckstrin domain protein 2, [RH, Score=326, Expect=5e-99]; ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [RH, Score=317, Expect=3e-94]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [RH, Score=330, Expect=3e-99]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=367, Expect=1e-117]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=350, Expect=4e-104]} {Smed: dd_Smed_v6_5600_0_1, dd_Smed_v6_5600_0_1, [Score=433, Expect=5e-131]} {RNA1509_50345} {RNA1310_4844, RNA1509_50345} {RNA1509_50345, RNA815_16713}
18. MligTC455_37489 38 0.8 Mlig455_063956

Neo: -

Age: -

0.989 - - 0.989 - - - Mlig455_063956 {REF} {Length: 4044} {RNA1310_69299} {RNA815_47623}
19. MligTC455_25805 30 0.63 Mlig455_044209

Neo: -

Age: -

0.987 - - 0.987 - - - Mlig455_044209 {REF} {Length: 5863} {RNA1509_55535} {RNA1310_78838.1} {RNA815_24119.1}
20. MligTC455_51123 37 0.77 Mlig455_059507

Neo: -

Age: -

0.987 - - - - 0.987 - Mlig455_059507 {REF} {Length: 970} {RNA1310_88282}
21. MligTC455_49875 59 1.22 Mlig455_027217

Neo: -

Age: -

0.985 - - - - 0.985 - Mlig455_027217 {REF} {Length: 1809} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=88.9]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=64.7, Expect=5e-12]} {Celegans: WBGene00008997, lgc-31, Ligand-Gated ion Channel, [Score=70.9, Expect=3e-14]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=67.0, Expect=6e-13]} {RNA1310_26175} {RNA815_7952}
22. MligTC455_29400 63 1.31 Mlig455_057781

Neo: -

Age: -

0.978 - - 0.978 - - - Mlig455_057781 {REF} {Length: 1746} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_51690} {RNA815_64986}
23. MligTC455_36229 56 1.17 Mlig455_034167

Neo: -

Age: logFC(26M/2M)=0.270

0.974 - - - - 0.974 - Mlig455_034167 {REF} {Length: 1450} {Pfam: Bap31/Bap29 transmembrane region [PF05529.14, score=46.9]} {RNA1509_57332} {RNA1310_24734.1} {RNA815_20971.1}
24. MligTC455_16760 96 2 Mlig455_039271

Neo: -

Age: Down-Up-Down

Region-enriched R2: 4.283/0.01201

CDKL2 0.967 - - 0.967 - - - Mlig455_039271 {REF} {Length: 4664} {Pfam: Protein kinase domain [PF00069.27, score=242.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.9]; ABC1 atypical kinase-like domain [PF03109.18, score=17.9]} {Human: ENSG00000138769, CDKL2, cyclin dependent kinase like 2, [RH, Score=445, Expect=3e-150]} {Mouse: ENSMUSG00000029403, Cdkl2, cyclin-dependent kinase-like 2 (CDC2-related kinase), [RH, Score=427, Expect=3e-143]} {Dmel: FBgn0031730, CG7236, [Score=332, Expect=3e-108]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=337, Expect=1e-111]} {Smed: dd_Smed_v6_17162_0_1, dd_Smed_v6_17162_0_1, [RH, Score=412, Expect=2e-140]} {RNA1509_31808} {RNA1310_11068.1} {RNA815_5716}
25. MligTC455_43009 84 1.76 Mlig455_028315

Neo: -

Age: -

NKX1-1 0.967 - - 0.967 - - - Mlig455_028315 {REF} {Length: 3063} {Pfam: Homeodomain [PF00046.31, score=75.2]} {Human: ENSG00000235608, NKX1-1, NK1 homeobox 1, [Score=140, Expect=6e-38]; ENSG00000229544, NKX1-2, NK1 homeobox 2, [Score=134, Expect=3e-36]} {Mouse: ENSMUSG00000029112, Nkx1-1, NK1 homeobox 1, [Score=146, Expect=2e-40]} {Dmel: FBgn0002941, slou, slouch, [RH, Score=152, Expect=2e-41]} {Celegans: WBGene00000428, ceh-1, Homeobox protein ceh-1, [Score=132, Expect=9e-38]} {Smed: dd_Smed_v6_19327_0_1, dd_Smed_v6_19327_0_1, [Score=145, Expect=1e-40]} {RNA1310_40325} {RNA815_61269}
26. MligTC455_29464 25 0.53 Mlig455_021892

Neo: -

Age: -

SDCCAG8 0.966 - - - - 0.966 - Mlig455_021892 {REF} {Length: 3036} {Pfam: Centrosomal colon cancer autoantigen protein family [PF15964.7, score=164.7]} {Human: ENSG00000276111, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]; ENSG00000054282, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000026504, Sdccag8, serologically defined colon cancer antigen 8, [RH, Score=109, Expect=4e-24]} {Dmel: FBgn0266566, CG45105, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_9295_0_2, dd_Smed_v6_9295_0_2, [RH, Score=87.8, Expect=7e-18]} {RNA1509_42574} {RNA1310_5942.1} {RNA815_9353.1}
27. MligTC455_57240 10 0.22 Mlig455_025117

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_025117 {REF} {Length: 421} {NoTransDecoderORF}
28. MligTC455_16175 64 1.34 Mlig455_047192

Neo: -

Age: -

GCM1 0.964 - - 0.964 - - - Mlig455_047192 {REF} {Length: 2352} {Pfam: GCM motif protein [PF03615.17, score=223.0]} {Human: ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=196, Expect=4e-57]; ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=192, Expect=1e-55]; ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=188, Expect=1e-53]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=229, Expect=3e-69]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=186, Expect=3e-54]} {RNA1509_58813} {RNA1310_66943} {RNA815_43872}
29. MligTC455_37687 131 2.72 Mlig455_057270

Neo: -

Age: -

0.964 - - 0.964 - - - Mlig455_057270 {REF} {Length: 2140} {NoTransDecoderORF} {RNA1509_41398} {RNA1310_49551} {RNA815_43706}
30. MligTC455_28070 31 0.65 Mlig455_003961

Neo: -

Age: Up-Down-Down

0.961 - - 0.961 - - - Mlig455_003961 {REF} {Length: 2138} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_10847.1} {RNA815_23623}
31. MligTC455_34530 17 0.36 Mlig455_062097

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_062097 {REF} {Length: 1319} {NoTransDecoderORF} {RNA1310_107201} {RNA815_45102}
32. MligTC455_35784 20 0.41 Mlig455_020625

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_020625 {REF} {Length: 14090} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=57.0]} {Smed: dd_Smed_v6_25838_0_1, dd_Smed_v6_25838_0_1, [Score=50.8, Expect=4e-07]} {RNA1310_27633} {RNA815_47416}
33. MligTC455_28658 446 9.29 Mlig455_034539, Mlig455_070435

Neo: -

Age: -

0.959 - - - - 0.959 -

Mlig455_034539 {REF} {Length: 6257} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF389) [PF04087.16, score=95.9]} {Dmel: FBgn0083945, CG34109, [RH, Score=156, Expect=8e-40]} {Smed: dd_Smed_v6_9934_0_1, dd_Smed_v6_9934_0_1, [RH, Score=148, Expect=5e-38]} {RNA1509_24637} {RNA1310_8899} {RNA815_11179}

Mlig455_070435 {REF} {Length: 5153} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF389) [PF04087.16, score=95.3]} {Dmel: FBgn0083945, CG34109, [RH, Score=160, Expect=1e-40]} {Smed: dd_Smed_v6_9934_0_1, dd_Smed_v6_9934_0_1, [RH, Score=151, Expect=1e-38]} {RNA1509_24637} {RNA1310_8899, RNA1509_24637} {RNA1509_24637, RNA815_11179}
34. MligTC455_16231 113 2.36 Mlig455_011361

Neo: -

Age: logFC(26M/2M)=-1.629

0.956 - - - - 0.956 - Mlig455_011361 {REF} {Length: 717} {TRANSSPLICED} {RNA1509_1634, RNA1509_44264} {RNA1310_62516, RNA1509_1634} {RNA1509_1634, RNA815_22723}
35. MligTC455_19759 18 0.39 Mlig455_002694, Mlig455_002710

Neo: -

Age: -

0.955 - - 0.955 - - -

Mlig455_002694 {REF} {Length: 1408} {RNA1310_38437} {RNA815_40458}

Mlig455_002710 {REF} {Length: 1745} {RNA1310_38437} {RNA815_40458}
36. MligTC455_12059 25 0.52 Mlig455_022731

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_022731 {REF} {Length: 1634} {NoTransDecoderORF} {RNA1310_68443}
37. MligTC455_53542 23 0.48 Mlig455_030646

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_030646 {REF} {Length: 1312} {RNA1509_1109} {RNA1310_27713} {RNA815_51867}
38. MligTC455_47966 2993 62.36 Mlig455_064676

Neo: -

Age: logFC(26M/2M)=-0.223

Regeneration-upregulated BL: 1.199

Regeneration-enriched BL: 1.199

C17orf97 0.951 - - - - 0.951 - Mlig455_064676 {REF} {Length: 1836} {Pfam: ATP:guanido phosphotransferase, N-terminal domain [PF02807.17, score=21.5]} {Human: ENSG00000283985, C17orf97, chromosome 17 open reading frame 97, [Score=57.8, Expect=2e-08]; ENSG00000187624, C17orf97, chromosome 17 open reading frame 97, [Score=57.8, Expect=2e-08]} {RNA1509_22581, RNA1509_52369, RNA1509_8425} {RNA1310_16794, RNA1509_22581, RNA1509_52369, RNA1509_8425} {RNA1509_22581, RNA1509_52369, RNA1509_8425, RNA815_9653}
39. MligTC455_16938 11 0.23 Mlig455_006765

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_006765 {REF} {Length: 968} {RNA1310_53422} {RNA815_20773}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA