TomoSeq data search

Data search

Results for MligTC455_42499

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42499

982

20.45

Mlig455_062692

Neo: Irradiation

Age: -

Region-enriched R4: 1.491/0.00202

PPHLN1

Mlig455_062692 {REF} {Length: 2168} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=19.5]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [Score=73.9, Expect=4e-14]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_3002_0_2, dd_Smed_v6_3002_0_2, [Score=73.2, Expect=3e-14]} {RNA1509_3916} {RNA1310_29650.1} {RNA815_12725}

Cumulative graph for MligTC455_42499

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.635	4.544	0.44784	1.00000
RegionR2	-0.84	4.544	0.03831	0.22700
RegionR3	-0.353	4.544	0.29354	0.83568
RegionR4	1.491	4.544	0.00013	0.00202
RegionR5	0.328	4.544	0.28598	0.61615
RegionR6	-0.285	4.544	0.40536	0.97522
RegionR7	-0.378	4.544	0.37048	1.00000
RegionR8	-0.598	4.544	0.25397	0.87358

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.214	4.544	0.84419	1.00000
RegenerationR2	-0.023	4.544	0.95031	1.00000
RegenerationR3	-0.29	4.544	0.47526	0.84702
RegenerationR4	-0.945	4.544	0.02024	0.22502
RegenerationR5	-0.317	4.544	0.39949	0.79886
RegenerationR6	0.3	4.544	0.46514	0.78139
RegenerationBL	0.447	4.544	0.32391	0.69067
RegenerationTP	0.703	4.544	0.13888	0.55658

Genes with expression patterns similar to MligTC455_42499

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42499	982	20.45	Mlig455_062692	Neo: Irradiation Age: - Region-enriched R4: 1.491/0.00202	PPHLN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062692 {REF} {Length: 2168} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=19.5]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [Score=73.9, Expect=4e-14]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_3002_0_2, dd_Smed_v6_3002_0_2, [Score=73.2, Expect=3e-14]} {RNA1509_3916} {RNA1310_29650.1} {RNA815_12725}
2.	MligTC455_42498	845	17.61	Mlig455_061340	Neo: - Age: - Region-enriched R4: 1.646/0.00161	PPHLN1	3.558	0.703	-	0.906	0.974	0.975	-	Mlig455_061340 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=21.8]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [Score=73.9, Expect=3e-14]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_3002_0_2, dd_Smed_v6_3002_0_2, [Score=72.0, Expect=5e-14]} {RNA1509_3916} {RNA1310_29650.1, RNA1509_3916} {RNA1509_3916, RNA815_12725}
3.	MligTC455_47256	1264	26.33	Mlig455_035294	Neo: Int S/G2/M Age: logFC(26M/2M)=0.234 Region-enriched R4: 1.028/0.00756	FRG1	1.73	-	-	-	0.962	-	0.768	Mlig455_035294 {REF} {Length: 1519} {TRANSSPLICED} {Pfam: FRG1-like domain [PF06229.14, score=186.6]; FAM32A [PF08555.12, score=20.3]} {Human: ENSG00000275145, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000283630, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000283153, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000109536, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]} {Mouse: ENSMUSG00000031590, Frg1, FSHD region gene 1, [RH, Score=209, Expect=7e-67]} {Dmel: FBgn0036964, FRG1, FSHD region gene 1, [RH, Score=168, Expect=7e-51]} {Celegans: WBGene00014177, frg-1, Protein FRG1 homolog, [RH, Score=129, Expect=8e-36]} {Smed: dd_Smed_v6_3094_0_1, dd_Smed_v6_3094_0_1, [RH, Score=206, Expect=8e-66]} {RNA1509_13353, RNA1509_49322} {RNA1310_22014.1, RNA1509_13353, RNA1509_49322} {RNA1509_13353, RNA1509_49322, RNA815_8956}
4.	MligTC455_15498	3605	75.11	Mlig455_031373	Neo: - Age: -	DYNLL2	0.973	-	-	-	-	0.973	-	Mlig455_031373 {REF} {Length: 1972} {Pfam: Dynein light chain type 1 [PF01221.20, score=85.2]; EF hand [PF13202.8, score=65.1]; EF hand [PF00036.34, score=61.1]; EF-hand domain pair [PF13499.8, score=54.8]; EF-hand domain [PF13405.8, score=54.0]; EF-hand domain pair [PF13833.8, score=34.8]; EF-hand domain [PF14658.8, score=24.0]; SAP domain-containing new25 [PF18953.2, score=18.4]} {Human: ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=70.5, Expect=2e-15]} {Mouse: ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=70.5, Expect=2e-15]} {Dmel: FBgn0011760, ctp, cut up, [Score=67.4, Expect=2e-14]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=67.0, Expect=1e-14]} {Smed: dd_Smed_v6_9661_0_1, dd_Smed_v6_9661_0_1, [Score=154, Expect=3e-47]} {RNA1509_7091} {RNA1310_38432} {RNA815_23795.1}
5.	MligTC455_48248	727	15.14	Mlig455_004203	Neo: - Age: -		0.969	-	-	-	0.969	-	-	Mlig455_004203 {REF} {Length: 2044} {TRANSSPLICED} {Pfam: HMG-box domain [PF09011.12, score=26.6]; HMG (high mobility group) box [PF00505.21, score=25.3]} {RNA1509_26598, RNA1509_8952} {RNA1310_13126, RNA1509_26598, RNA1509_8952} {RNA1509_26598, RNA1509_8952, RNA815_2407}
6.	MligTC455_48004	1344	28	Mlig455_066992	Neo: Int S/G2/M Age: - Region-enriched R4: 1.172/0.00763	PSMD2	0.968	-	-	-	0.968	-	-	Mlig455_066992 {REF} {Length: 4622} {Pfam: RPN1 N-terminal domain [PF17781.3, score=363.0]; 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal [PF18051.3, score=105.9]; Proteasome/cyclosome repeat [PF01851.24, score=61.4]} {Human: ENSG00000175166, PSMD2, proteasome 26S subunit, non-ATPase 2, [RH, Score=902, Expect=0.0]} {Mouse: ENSMUSG00000006998, Psmd2, proteasome (prosome, macropain) 26S subunit, non-ATPase, 2, [RH, Score=897, Expect=0.0]} {Dmel: FBgn0028695, Rpn1, Regulatory particle non-ATPase 1, [RH, Score=837, Expect=0.0]} {Celegans: WBGene00004458, rpn-1, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=809, Expect=0.0]} {Smed: dd_Smed_v6_2481_0_1, dd_Smed_v6_2481_0_1, [RH, Score=950, Expect=0.0]} {RNA1509_1075, RNA1509_29705} {RNA1310_3428, RNA1509_1075, RNA1509_29705} {RNA1509_1075, RNA1509_29705, RNA815_1690}
7.	MligTC455_29420	848	17.67	Mlig455_038189, Mlig455_038385	Neo: - Age: - Region-enriched R4: 1.538/0.01069	SLC16A12	0.963	-	-	-	0.963	-	-	Mlig455_038189 {REF} {Length: 5060} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=69.6]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=116, Expect=1e-26]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=113, Expect=8e-26]; ENSMUSG00000032902, Slc16a1, solute carrier family 16 (monocarboxylic acid transporters), member 1, [Score=108, Expect=3e-24]} {Dmel: FBgn0035173, CG13907, [Score=153, Expect=6e-38]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=147, Expect=4e-36]} {Smed: dd_Smed_v6_10147_0_4, dd_Smed_v6_10147_0_4, [Score=339, Expect=2e-101]} {RNA1509_13262} {RNA1310_18255} {RNA815_14383} Mlig455_038385 {REF} {Length: 5092} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=69.2]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=116, Expect=1e-26]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=113, Expect=7e-26]; ENSMUSG00000032902, Slc16a1, solute carrier family 16 (monocarboxylic acid transporters), member 1, [Score=108, Expect=3e-24]} {Dmel: FBgn0035173, CG13907, [Score=153, Expect=6e-38]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=147, Expect=4e-36]} {Smed: dd_Smed_v6_10147_0_4, dd_Smed_v6_10147_0_4, [Score=344, Expect=3e-103]} {RNA1509_13262} {RNA1310_18255, RNA1509_13262} {RNA1509_13262, RNA815_14383}
8.	MligTC455_32645	1387	28.9	Mlig455_012140, Mlig455_028960	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_012140 {REF} {Length: 2698} {TRANSSPLICED} {RNA1509_15491, RNA1509_24775} {RNA1310_17194.1, RNA1509_24775} {RNA1509_24775, RNA815_5885} Mlig455_028960 {REF} {Length: 2784} {TRANSSPLICED} {RNA1509_15491} {RNA1310_17194.1, RNA1509_15491} {RNA1509_15491, RNA815_5885}
9.	MligTC455_47340	1613	33.6	Mlig455_067342	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.480		0.962	-	-	-	-	0.962	-	Mlig455_067342 {REF} {Length: 1430} {RNA1509_11932} {RNA1310_46975.1, RNA1509_11932} {RNA1509_11932, RNA815_50642}
10.	MligTC455_09341	2563	53.4	Mlig455_040188	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_040188 {REF} {Length: 902} {RNA1509_14363} {RNA1310_45524.1} {RNA815_21772}
11.	MligTC455_30336	3591	74.81	Mlig455_009403, Mlig455_036921	Neo: Int S/G2/M Age: -		0.961	-	-	-	0.961	-	-	Mlig455_009403 {REF} {Length: 1869} {TRANSSPLICED} {Pfam: C-terminal duplication domain of Friend of PRMT1 [PF13865.8, score=27.5]} {RNA1509_16417, RNA1509_20669} {RNA1310_14143, RNA1509_16417, RNA1509_20669} {RNA1509_16417, RNA1509_20669, RNA815_6550.1} Mlig455_036921 {REF} {Length: 2321} {TRANSSPLICED} {Pfam: C-terminal duplication domain of Friend of PRMT1 [PF13865.8, score=28.4]} {RNA1509_15581, RNA1509_16417, RNA1509_29379, RNA1509_33502, RNA1509_50154} {RNA1310_14143, RNA1509_15581, RNA1509_29379, RNA1509_33502, RNA1509_50154} {RNA1509_15581, RNA1509_29379, RNA1509_33502, RNA1509_50154, RNA815_6550.1}
12.	MligTC455_30759	3803	79.23	Mlig455_007018, Mlig455_019153	Neo: - Age: Up-Down-Up, logFC(26M/2M)=5.943		0.956	-	-	-	-	0.956	-	Mlig455_007018 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_7853.1} Mlig455_019153 {REF} {Length: 1071} {TRANSSPLICED} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
13.	MligTC455_30758	1926	40.12	Mlig455_000739	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_000739 {REF} {Length: 672} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_14771.2}
14.	MligTC455_30762	5596	116.58	Mlig455_058999, Mlig455_068841, Mlig455_070941	Neo: - Age: logFC(26M/2M)=0.399		0.955	-	-	-	-	0.955	-	Mlig455_058999 {REF} {Length: 1070} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_068841 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_070941 {REF} {Length: 1067} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
15.	MligTC455_22570	261	5.44	Mlig455_006659	Neo: - Age: - Region-enriched R2: 3.042/0.02689		0.954	-	-	-	-	0.954	-	Mlig455_006659 {REF} {Length: 918} {NoTransDecoderORF} {RNA1509_10005} {RNA1310_56340} {RNA815_38610}
16.	MligTC455_32337	1084	22.58	Mlig455_058984	Neo: Int S/G2/M Age: Up-Down-Up	FMR1	0.952	-	-	-	0.952	-	-	Mlig455_058984 {REF} {Length: 3562} {Pfam: KH domain [PF00013.31, score=35.7]} {Human: ENSG00000102081, FMR1, fragile X mental retardation 1, [Score=120, Expect=3e-30]; ENSG00000114416, FXR1, FMR1 autosomal homolog 1, [Score=117, Expect=2e-29]} {Mouse: ENSMUSG00000027680, Fxr1, fragile X mental retardation gene 1, autosomal homolog, [Score=117, Expect=1e-29]; ENSMUSG00000018765, Fxr2, fragile X mental retardation, autosomal homolog 2, [Score=112, Expect=1e-27]} {Dmel: FBgn0028734, Fmr1, [Score=114, Expect=4e-28]} {Smed: dd_Smed_v6_2105_0_1, dd_Smed_v6_2105_0_1, [Score=94.0, Expect=1e-21]} {RNA1509_53308} {RNA1310_3140.1, RNA1509_53308} {RNA1509_53308, RNA815_2441}
17.	MligTC455_30760	5612	116.91	Mlig455_006073, Mlig455_011942, Mlig455_052693	Neo: - Age: logFC(26M/2M)=1.042		0.951	-	-	-	-	0.951	-	Mlig455_006073 {REF} {Length: 1112} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_011942 {REF} {Length: 1109} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200, RNA1509_21131} {RNA1310_29002, RNA1509_21131} {RNA1509_21131, RNA815_7853.1} Mlig455_052693 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_7853.1}
18.	MligTC455_31024	469	9.77	Mlig455_008666	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_008666 {REF} {Length: 399} {NoTransDecoderORF} {RNA1509_24158} {RNA1310_3578.1} {RNA815_24034}
19.	MligTC455_30761	3551	73.99	Mlig455_039585, Mlig455_069818	Neo: - Age: Up-Up-Down		0.95	-	-	-	-	0.950	-	Mlig455_039585 {REF} {Length: 5014} {Pfam: Ammonium Transporter Family [PF00909.23, score=121.3]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=160, Expect=3e-47]} {Celegans: WBGene00000135, amt-3, Putative ammonium transporter 3, [Score=136, Expect=4e-38]} {RNA1509_11254, RNA1509_1200} {RNA1310_29002, RNA1509_11254} {RNA1509_11254, RNA815_7853.1} Mlig455_069818 {REF} {Length: 1115} {TRANSSPLICED} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}

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