Data search
Results for MligTC455_41424
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41424 | 181 | 3.77 | Mlig455_018196 | Neo: - Age: - |
BBS4 | Mlig455_018196 {REF} {Length: 2934} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=132.0]; Tetratricopeptide repeat [PF00515.30, score=117.7]; Tetratricopeptide repeat [PF13181.8, score=99.9]; TPR repeat [PF13414.8, score=73.7]; Tetratricopeptide repeat [PF14559.8, score=56.0]; Tetratricopeptide repeat [PF13432.8, score=55.0]; Tetratricopeptide repeat [PF13371.8, score=54.8]; Tetratricopeptide repeat [PF13428.8, score=50.2]; Tetratricopeptide repeat [PF13424.8, score=50.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=49.8]; Tetratricopeptide repeat [PF13176.8, score=46.4]; Tetratricopeptide repeat [PF13431.8, score=40.4]; Tetratricopeptide repeat [PF13174.8, score=33.5]; Coatomer epsilon subunit [PF04733.16, score=22.6]; Bacterial type III secretion protein (HrpB1_HrpK) [PF09613.12, score=18.8]} {Human: ENSG00000140463, BBS4, Bardet-Biedl syndrome 4, [RH, Score=496, Expect=6e-171]} {Mouse: ENSMUSG00000025235, Bbs4, Bardet-Biedl syndrome 4 (human), [RH, Score=492, Expect=1e-169]} {Dmel: FBgn0033578, BBS4, Bardet-Biedl syndrome 4, [RH, Score=252, Expect=5e-77]} {Celegans: WBGene00043992, bbs-4, Bardet-Biedl syndrome 4 protein homolog, [RH, Score=207, Expect=2e-60]} {Smed: dd_Smed_v6_11370_0_1, dd_Smed_v6_11370_0_1, [RH, Score=446, Expect=3e-152]} {RNA1509_10669, RNA1509_53697, RNA1509_59346} {RNA1310_19623.1, RNA1509_53697, RNA1509_59346} {RNA1509_53697, RNA1509_59346, RNA815_1541.1} |
Cumulative graph for MligTC455_41424
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.418 | 2.509 | 0.81851 | 1.00000 | |
| RegionR2 | 0.668 | 2.509 | 0.37497 | 0.76983 | |
| RegionR3 | -0.336 | 2.509 | 0.53254 | 1.00000 | |
| RegionR4 | -1.393 | 2.509 | 0.08649 | 0.27918 | |
| RegionR5 | -0.188 | 2.509 | 0.67749 | 1.00000 | |
| RegionR6 | -0.511 | 2.509 | 0.39001 | 0.96443 | |
| RegionR7 | 0.442 | 2.509 | 0.55288 | 1.00000 | |
| RegionR8 | 0.9 | 2.509 | 0.28481 | 0.91205 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.613 | 2.509 | 0.56949 | 1.00000 | |
| RegenerationR2 | 0.903 | 2.509 | 0.10641 | 0.51242 | |
| RegenerationR3 | 1.506 | 2.509 | 0.02470 | 0.28286 | |
| RegenerationR4 | 1.116 | 2.509 | 0.15262 | 0.58225 | |
| RegenerationR5 | 0.928 | 2.509 | 0.10657 | 0.49409 | |
| RegenerationR6 | 1.177 | 2.509 | 0.11926 | 0.42452 | |
| RegenerationBL | -0.752 | 2.509 | 0.58437 | 0.93558 | |
| RegenerationTP | 0.245 | 2.509 | 0.76147 | 1.00000 |
Genes with expression patterns similar to MligTC455_41424
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41424 | 181 | 3.77 | Mlig455_018196 | Neo: - Age: - |
BBS4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018196 {REF} {Length: 2934} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=132.0]; Tetratricopeptide repeat [PF00515.30, score=117.7]; Tetratricopeptide repeat [PF13181.8, score=99.9]; TPR repeat [PF13414.8, score=73.7]; Tetratricopeptide repeat [PF14559.8, score=56.0]; Tetratricopeptide repeat [PF13432.8, score=55.0]; Tetratricopeptide repeat [PF13371.8, score=54.8]; Tetratricopeptide repeat [PF13428.8, score=50.2]; Tetratricopeptide repeat [PF13424.8, score=50.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=49.8]; Tetratricopeptide repeat [PF13176.8, score=46.4]; Tetratricopeptide repeat [PF13431.8, score=40.4]; Tetratricopeptide repeat [PF13174.8, score=33.5]; Coatomer epsilon subunit [PF04733.16, score=22.6]; Bacterial type III secretion protein (HrpB1_HrpK) [PF09613.12, score=18.8]} {Human: ENSG00000140463, BBS4, Bardet-Biedl syndrome 4, [RH, Score=496, Expect=6e-171]} {Mouse: ENSMUSG00000025235, Bbs4, Bardet-Biedl syndrome 4 (human), [RH, Score=492, Expect=1e-169]} {Dmel: FBgn0033578, BBS4, Bardet-Biedl syndrome 4, [RH, Score=252, Expect=5e-77]} {Celegans: WBGene00043992, bbs-4, Bardet-Biedl syndrome 4 protein homolog, [RH, Score=207, Expect=2e-60]} {Smed: dd_Smed_v6_11370_0_1, dd_Smed_v6_11370_0_1, [RH, Score=446, Expect=3e-152]} {RNA1509_10669, RNA1509_53697, RNA1509_59346} {RNA1310_19623.1, RNA1509_53697, RNA1509_59346} {RNA1509_53697, RNA1509_59346, RNA815_1541.1} |
| 2. | MligTC455_16506 | 268 | 5.58 | Mlig455_067074 | Neo: - |
SERINC3 | 1.691 | - | - | 0.950 | - | - | 0.741 | Mlig455_067074 {REF} {Length: 2761} {TRANSSPLICED} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=489.4]} {Human: ENSG00000132824, SERINC3, serine incorporator 3, [RH, Score=400, Expect=9e-136]} {Mouse: ENSMUSG00000017707, Serinc3, serine incorporator 3, [RH, Score=353, Expect=1e-117]} {Dmel: FBgn0028399, TMS1, [Score=319, Expect=2e-104]} {Celegans: WBGene00021956, Y57E12AL.1, [Score=346, Expect=3e-115]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [Score=460, Expect=1e-159]} {RNA1509_12228} {RNA1310_17866, RNA1509_12228} {RNA1509_12228, RNA815_3387.1} |
| 3. | MligTC455_16214 | 198 | 4.13 | Mlig455_031891 | Neo: - |
AXIN2 | 1.676 | - | - | - | 0.964 | - | 0.712 | Mlig455_031891 {REF} {Length: 5190} {TRANSSPLICED} {Pfam: DIX domain [PF00778.19, score=84.0]; Regulator of G protein signaling domain [PF00615.21, score=35.6]} {Human: ENSG00000168646, AXIN2, axin 2, [Score=132, Expect=3e-31]} {Mouse: ENSMUSG00000000142, Axin2, axin 2, [Score=111, Expect=5e-25]} {Dmel: FBgn0026597, Axn, Axin, [RH, Score=69.3, Expect=7e-12]} {Smed: dd_Smed_v6_4900_0_1, dd_Smed_v6_4900_0_1, [RH, Score=115, Expect=1e-26]} {RNA1509_26666} {RNA1310_18759} {RNA815_19659} |
| 4. | MligTC455_02742 | 103 | 2.15 | Mlig455_020694, Mlig455_020762 | Neo: - Age: Down-Up-Down |
0.977 | - | - | 0.977 | - | - | - | Mlig455_020694 {REF} {Length: 1197} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.0]; Prokaryotic RING finger family 4 [PF14447.8, score=21.1]} {RNA1310_61039} Mlig455_020762 {REF} {Length: 1489} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.0]; Prokaryotic RING finger family 4 [PF14447.8, score=21.1]} {RNA1509_2215} {RNA1310_61039} {RNA815_6756.1} |
|
| 5. | MligTC455_36982 | 50 | 1.04 | Mlig455_043216, Mlig455_050309, Mlig455_050323 | Neo: - Age: Up-Down-Up Region-enriched R5: 2.762/0.03145 |
ASIC5 | 0.972 | - | - | 0.972 | - | - | - | Mlig455_043216 {REF} {Length: 1744} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.6]} {RNA1310_74896.2} {RNA815_61773} Mlig455_050309 {REF} {Length: 1910} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=93.5]; Kringle domain [PF00051.20, score=20.7]} {RNA1310_19910} {RNA815_51153} Mlig455_050323 {REF} {Length: 3233} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=158.8]; Kringle domain [PF00051.20, score=20.7]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=57.8, Expect=7e-08]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=50.8, Expect=6e-06]} {Smed: dd_Smed_v6_16557_0_1, dd_Smed_v6_16557_0_1, [Score=54.3, Expect=2e-07]} {RNA1310_9846.1} {RNA815_21595} |
| 6. | MligTC455_09815 | 233 | 4.84 | Mlig455_069904 | Neo: - Age: - Region-enriched R5: 1.280/0.02090 |
0.97 | - | - | 0.970 | - | - | - | Mlig455_069904 {REF} {Length: 2860} {TRANSSPLICED} {RNA1509_48847} {RNA1310_16604, RNA1509_48847} {RNA1509_48847, RNA815_16640} | |
| 7. | MligTC455_11185 | 36 | 0.75 | Mlig455_042266 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_042266 {REF} {Length: 1065} {NoTransDecoderORF} {RNA1509_37183} {RNA1310_68417} | |
| 8. | MligTC455_52748 | 199 | 4.15 | Mlig455_061690 | Neo: - Age: - |
SNTB1 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_061690 {REF} {Length: 3251} {Pfam: PDZ domain [PF00595.26, score=71.2]; PH domain [PF18012.3, score=53.6]; PH domain [PF00169.31, score=39.0]; PDZ domain [PF17820.3, score=25.1]} {Human: ENSG00000172164, SNTB1, syntrophin beta 1, [RH, Score=390, Expect=5e-130]; ENSG00000168807, SNTB2, syntrophin beta 2, [RH, Score=388, Expect=2e-129]} {Mouse: ENSMUSG00000041308, Sntb2, syntrophin, basic 2, [RH, Score=389, Expect=7e-130]; ENSMUSG00000060429, Sntb1, syntrophin, basic 1, [RH, Score=380, Expect=1e-126]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [RH, Score=350, Expect=1e-113]} {Celegans: WBGene00006062, stn-1, Syntrophin-1, [RH, Score=210, Expect=3e-62]} {Smed: dd_Smed_v6_7105_0_1, dd_Smed_v6_7105_0_1, [Score=459, Expect=6e-158]} {RNA1509_18297} {RNA1310_10457} {RNA815_22317} |
| 9. | MligTC455_22540 | 77 | 1.61 | Mlig455_022779 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_022779 {REF} {Length: 1529} {RNA1509_49656} {RNA1310_38953} {RNA815_37820} | |
| 10. | MligTC455_23349 | 679 | 14.15 | Mlig455_001165, Mlig455_001325 | Neo: - Age: - |
TANGO6 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_001165 {REF} {Length: 6816} {Pfam: Required for nuclear transport of RNA pol II C-terminus 1 [PF10363.11, score=52.6]; SAP domain [PF02037.29, score=33.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=30.8]; HEAT repeat [PF02985.24, score=20.4]} {Human: ENSG00000103047, TANGO6, transport and golgi organization 6 homolog, [RH, Score=96.7, Expect=4e-19]} {Mouse: ENSMUSG00000041949, Tango6, transport and golgi organization 6, [Score=80.5, Expect=2e-14]} {Celegans: WBGene00011806, ekl-6, [Score=63.5, Expect=2e-09]} {Smed: dd_Smed_v6_7512_0_1, dd_Smed_v6_7512_0_1, [Score=51.6, Expect=6e-06]} {RNA1509_49696} {RNA1310_5141} {RNA815_5744} Mlig455_001325 {REF} {Length: 5557} {TRANSSPLICED} {Pfam: Required for nuclear transport of RNA pol II C-terminus 1 [PF10363.11, score=54.5]; HEAT repeat [PF02985.24, score=21.8]} {Human: ENSG00000103047, TANGO6, transport and golgi organization 6 homolog, [RH, Score=96.7, Expect=2e-19]} {Mouse: ENSMUSG00000041949, Tango6, transport and golgi organization 6, [RH, Score=82.4, Expect=4e-15]} {Celegans: WBGene00011806, ekl-6, [RH, Score=64.7, Expect=5e-10]} {Smed: dd_Smed_v6_7512_0_1, dd_Smed_v6_7512_0_1, [Score=50.8, Expect=6e-06]} {RNA1509_49696} {RNA1310_5141} {RNA815_2736} |
| 11. | MligTC455_45264 | 453 | 9.43 | Mlig455_066967 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.005/0.01959 |
ADAR | 0.952 | - | - | 0.952 | - | - | - | Mlig455_066967 {REF} {Length: 3553} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=89.7]} {Human: ENSG00000160710, ADAR, adenosine deaminase, RNA specific, [Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000027951, Adar, adenosine deaminase, RNA-specific, [Score=77.4, Expect=4e-14]} {Celegans: WBGene00000079, adr-1, Adenosine Deaminase acting on RNA; Truncated ADR-1F, [Score=52.0, Expect=1e-06]} {Smed: dd_Smed_v6_4276_0_1, dd_Smed_v6_4276_0_1, [RH, Score=125, Expect=6e-30]} {RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600} {RNA1310_8055.1, RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600} {RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600, RNA815_19621} |
| 12. | MligTC455_22305 | 225 | 4.69 | Mlig455_005800, Mlig455_005827, Mlig455_059409 | Neo: - Age: Up-Down-Down |
ZNFX1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_005800 {REF} {Length: 7119} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=100.6]; AAA domain [PF13086.8, score=79.8]; AAA domain [PF13245.8, score=32.3]; AAA domain [PF13604.8, score=24.4]; PhoH-like protein [PF02562.18, score=19.0]; AAA domain [PF13401.8, score=18.9]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=119, Expect=5e-26]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=124, Expect=1e-27]} {Dmel: FBgn0039165, CG6204, [Score=152, Expect=6e-37]} {Celegans: WBGene00014208, ZK1067.2, [Score=107, Expect=6e-23]} {Smed: dd_Smed_v6_11824_0_1, dd_Smed_v6_11824_0_1, [Score=163, Expect=4e-40]} {RNA1509_16749} {RNA1310_282.2} {RNA815_251.1} Mlig455_005827 {REF} {Length: 1755} {RNA1509_44728} {RNA1310_13320} {RNA815_24343} Mlig455_059409 {REF} {Length: 6443} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=81.5]; AAA domain [PF13086.8, score=73.7]; AAA domain [PF13245.8, score=31.5]; AAA domain [PF13604.8, score=21.2]; AAA domain [PF13401.8, score=19.3]; PhoH-like protein [PF02562.18, score=18.7]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=118, Expect=9e-26]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=123, Expect=2e-27]} {Dmel: FBgn0039165, CG6204, [Score=134, Expect=2e-31]} {Celegans: WBGene00014208, ZK1067.2, [Score=107, Expect=8e-23]} {Smed: dd_Smed_v6_11824_0_1, dd_Smed_v6_11824_0_1, [Score=158, Expect=1e-38]} {RNA1509_16749} {RNA1310_282.1} {RNA815_251.1} |
| 13. | MligTC455_48600 | 395 | 8.23 | Mlig455_001133 | Neo: Germline Age: Down-Up-Down |
SLC35E3 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_001133 {REF} {Length: 1757} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=65.8]; EamA-like transporter family [PF00892.22, score=31.7]; UAA transporter family [PF08449.13, score=23.4]} {Human: ENSG00000175782, SLC35E3, solute carrier family 35 member E3, [RH, Score=293, Expect=2e-98]} {Mouse: ENSMUSG00000060181, Slc35e3, solute carrier family 35, member E3, [RH, Score=289, Expect=6e-97]} {RNA1509_18211} {RNA1310_8738.1} {RNA815_11669} |
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