M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_50390

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50390 19 0.40 Mlig455_016912

Neo: -

Age: -

 CHRNA3 Mlig455_016912 {REF} {Length: 2944} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=242.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=157.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=326, Expect=7e-105]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=317, Expect=2e-101]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=317, Expect=2e-101]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=313, Expect=5e-100]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=320, Expect=8e-103]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=317, Expect=1e-101]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=315, Expect=2e-101]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=304, Expect=8e-97]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=347, Expect=1e-112]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [RH, Score=307, Expect=1e-98]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [RH, Score=539, Expect=0.0]} {RNA1310_33221} {RNA815_23594.2}

Cumulative graph for MligTC455_50390

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.27 0.61 0.99997 1.00000
RegionR2 0.543 0.61 0.87032 1.00000
RegionR3 -0.995 0.61 0.99988 1.00000
RegionR4 0.924 0.61 0.99991 1.00000
RegionR5 1.79 0.61 0.16864 0.43635
RegionR6 1.495 0.61 0.27599 0.86611
RegionR7 -1.28 0.61 0.99995 1.00000
RegionR8 -1.207 0.61 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.03 0.61 0.99993 1.00000
RegenerationR2 0.164 0.61 0.89976 1.00000
RegenerationR3 -0.836 0.61 1.00000 1.00000
RegenerationR4 -1.209 0.61 1.00000 1.00000
RegenerationR5 -0.647 0.61 0.58400 0.90217
RegenerationR6 -2.864 0.61 0.16218 0.49125
RegenerationBL 2.891 0.61 0.36391 0.73228
RegenerationTP 2.059 0.61 0.73210 1.00000


Genes with expression patterns similar to MligTC455_50390

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50390 19 0.4 Mlig455_016912

Neo: -

Age: -

 CHRNA3 2 - - 1.000 - - 1.000 Mlig455_016912 {REF} {Length: 2944} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=242.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=157.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=326, Expect=7e-105]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=317, Expect=2e-101]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=317, Expect=2e-101]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=313, Expect=5e-100]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=320, Expect=8e-103]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=317, Expect=1e-101]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=315, Expect=2e-101]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=304, Expect=8e-97]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=347, Expect=1e-112]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [RH, Score=307, Expect=1e-98]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [RH, Score=539, Expect=0.0]} {RNA1310_33221} {RNA815_23594.2}
2. MligTC455_11444 25 0.53 Mlig455_066854

Neo: -

Age: -

 0.99 - - - - - 0.990 Mlig455_066854 {REF} {Length: 845} {NoTransDecoderORF} {RNA1310_141915}
3. MligTC455_03801 18 0.38 Mlig455_017135

Neo: -

Age: -

 0.987 - - 0.987 - - - Mlig455_017135 {REF} {Length: 441} {NoTransDecoderORF} {RNA1509_33446} {RNA1310_9913} {RNA815_13562.1}
4. MligTC455_08216 34 0.7 Mlig455_009138

Neo: -

Age: -

 0.986 - - - - - 0.986 Mlig455_009138 {REF} {Length: 379} {NoTransDecoderORF} {RNA1310_66482.1} {RNA815_62564}
5. MligTC455_42418 64 1.33 Mlig455_063557

Neo: -

Age: -

 SCNN1G 0.982 - - - - - 0.982 Mlig455_063557 {REF} {Length: 3686} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=197.1]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=75.5, Expect=1e-13]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=53.9, Expect=4e-07]; ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=52.0, Expect=1e-06]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=56.6, Expect=3e-08]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=318, Expect=6e-101]} {RNA1310_46167} {RNA815_32816}
6. MligTC455_09307 8 0.16 Mlig455_043212

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_043212 {REF} {Length: 373} {Pfam: NHL repeat [PF01436.23, score=23.2]} {RNA1509_15622} {RNA1310_37306} {RNA815_3900.8}
7. MligTC455_24621 43 0.9 Mlig455_034366

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_034366 {REF} {Length: 575} {NoTransDecoderORF}
8. MligTC455_26668 406 8.46 Mlig455_011365

Neo: -

Age: -

Regeneration-upregulated BL: 6.270

Regeneration-enriched BL: 6.270

 0.977 - - - - - 0.977 Mlig455_011365 {REF} {Length: 3699} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=20.7]} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857}
9. MligTC455_08498 26 0.55 Mlig455_053380

Neo: -

Age: -

 0.976 - - - - - 0.976 Mlig455_053380 {REF} {Length: 962} {NoTransDecoderORF} {RNA1310_91082}
10. MligTC455_39057 57 1.18 Mlig455_013966

Neo: Int S/G2/M

Age: -

 0.975 - - - - - 0.975 Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321}
11. MligTC455_49527 147 3.06 Mlig455_027843

Neo: -

Age: -

 0.975 - - - - - 0.975 Mlig455_027843 {REF} {Length: 1796} {RNA1509_15103} {RNA1310_101911} {RNA815_59080}
12. MligTC455_21557 17 0.35 Mlig455_015278

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_015278 {REF} {Length: 738} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}
13. MligTC455_11319 34 0.7 Mlig455_054806

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_054806 {REF} {Length: 275} {NoTransDecoderORF}
14. MligTC455_06484 46 0.96 Mlig455_061537

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_061537 {REF} {Length: 542} {NoTransDecoderORF} {RNA1310_116180}
15. MligTC455_14067 223 4.65 Mlig455_069308

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_069308 {REF} {Length: 1219} {NoTransDecoderORF}
16. MligTC455_24131 159 3.32 Mlig455_002721

Neo: -

Age: -

 DNAJA3 0.968 - - 0.968 - - - Mlig455_002721 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=72.9]} {Human: ENSG00000276726, DNAJA3, DnaJ heat shock protein family (Hsp40) member A3, [Score=64.7, Expect=2e-11]; ENSG00000103423, DNAJA3, DnaJ heat shock protein family (Hsp40) member A3, [Score=64.7, Expect=2e-11]; ENSG00000110011, DNAJC4, DnaJ heat shock protein family (Hsp40) member C4, [Score=63.2, Expect=2e-11]; ENSG00000132002, DNAJB1, DnaJ heat shock protein family (Hsp40) member B1, [Score=61.6, Expect=2e-10]} {Mouse: ENSMUSG00000024963, Dnajc4, DnaJ heat shock protein family (Hsp40) member C4, [RH, Score=63.2, Expect=2e-11]} {Dmel: FBgn0038127, CG8476, [RH, Score=69.7, Expect=6e-14]} {Celegans: WBGene00001022, dnj-4, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=57.4, Expect=1e-09]} {Smed: dd_Smed_v6_7057_0_1, dd_Smed_v6_7057_0_1, [Score=72.4, Expect=5e-15]} {RNA1509_21231} {RNA1310_36701.1} {RNA815_21052}
17. MligTC455_20478 52 1.08 Mlig455_031423

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_031423 {REF} {Length: 1562} {NoTransDecoderORF} {RNA1310_4910}
18. MligTC455_28153 87 1.82 Mlig455_023355

Neo: -

Age: Down-Up-Down

 0.967 - - - - - 0.967 Mlig455_023355 {REF} {Length: 2641} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=23.0]} {RNA1509_36436} {RNA1310_24275.2} {RNA815_11419.1}
19. MligTC455_08889 26 0.54 Mlig455_054256

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_054256 {REF} {Length: 1360} {NoTransDecoderORF} {RNA1509_50721} {RNA1310_33163} {RNA815_21535}
20. MligTC455_31201 73 1.53 Mlig455_045851, Mlig455_045867

Neo: -

Age: Up-Down-Up

 LRRC9 0.964 - - - - - 0.964

Mlig455_045851 {REF} {Length: 5484} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=159.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=149.6]; Leucine rich repeat [PF13855.8, score=111.6]} {Human: ENSG00000131951, LRRC9, leucine rich repeat containing 9, [RH, Score=437, Expect=1e-129]} {Mouse: ENSMUSG00000021090, Lrrc9, leucine rich repeat containing 9, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0039728, CG7896, [Score=73.6, Expect=1e-12]} {Celegans: WBGene00020266, T05H4.3, [RH, Score=80.1, Expect=7e-15]} {Smed: dd_Smed_v6_14851_0_1, dd_Smed_v6_14851_0_1, [RH, Score=368, Expect=4e-108]} {RNA1509_22179} {RNA1310_1731, RNA1509_22179} {RNA1509_22179, RNA815_589.1}

Mlig455_045867 {REF} {Length: 5480} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=159.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=149.0]; Leucine rich repeat [PF13855.8, score=111.3]} {Human: ENSG00000131951, LRRC9, leucine rich repeat containing 9, [RH, Score=436, Expect=2e-129]} {Mouse: ENSMUSG00000021090, Lrrc9, leucine rich repeat containing 9, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0039728, CG7896, [Score=74.7, Expect=6e-13]} {Celegans: WBGene00020266, T05H4.3, [RH, Score=80.1, Expect=8e-15]} {Smed: dd_Smed_v6_14851_0_1, dd_Smed_v6_14851_0_1, [RH, Score=369, Expect=2e-108]} {RNA1509_22179} {RNA1310_1731} {RNA815_589.1}
21. MligTC455_10321 235 4.89 Mlig455_004945, Mlig455_035629, Mlig455_055310

Neo: -

Age: -

 0.963 - - - - - 0.963

Mlig455_004945 {REF} {Length: 80} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363}

Mlig455_035629 {REF} {Length: 143} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363}

Mlig455_055310 {REF} {Length: 2978} {RNA1509_52583} {RNA1310_43983.1} {RNA815_13363}
22. MligTC455_14961 39 0.82 Mlig455_048867

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
23. MligTC455_18942 304 6.33 Mlig455_010489, Mlig455_061891

Neo: -

Age: -

Region-enriched R4: 2.841/0.02022

 0.963 - - - - - 0.963

Mlig455_010489 {REF} {Length: 925} {NoTransDecoderORF} {RNA1310_38724.1} {RNA815_50423}

Mlig455_061891 {REF} {Length: 1013} {NoTransDecoderORF} {RNA1310_38724.1} {RNA815_50423}
24. MligTC455_32142 40 0.84 Mlig455_006350

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.521

 TRPM7 0.963 - - - - - 0.963 Mlig455_006350 {REF} {Length: 5802} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=55.9]; Ankyrin repeats (3 copies) [PF12796.9, score=45.8]; Ankyrin repeat [PF13606.8, score=32.5]; Ankyrin repeats (many copies) [PF13857.8, score=28.5]; Ankyrin repeat [PF00023.32, score=25.7]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=104, Expect=1e-21]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=102, Expect=6e-21]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=99.4, Expect=4e-20]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=99.4, Expect=3e-20]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=104, Expect=7e-22]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=103, Expect=1e-21]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=103, Expect=1e-21]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=92.4, Expect=2e-18]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=77.8, Expect=5e-14]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=120, Expect=1e-27]} {RNA1509_29775} {RNA1310_1317} {RNA815_8567}
25. MligTC455_30270 406 8.46 Mlig455_012719, Mlig455_044289

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 4.823

Regeneration-enriched BL: 4.823

 0.961 - - - - - 0.961

Mlig455_012719 {REF} {Length: 392} {RNA1509_16349} {RNA1310_2575}

Mlig455_044289 {REF} {Length: 4784} {RNA1509_16349} {RNA1310_2575} {RNA815_3500.1}
26. MligTC455_49818 37 0.78 Mlig455_007221, Mlig455_007455

Neo: -

Age: -

 0.961 - - - - - 0.961

Mlig455_007221 {REF} {Length: 2050} {RNA1310_53527} {RNA815_61088}

Mlig455_007455 {REF} {Length: 3769} {Mouse: ENSMUSG00000054999, Naaladl1, N-acetylated alpha-linked acidic dipeptidase-like 1, [Score=56.6, Expect=8e-08]} {RNA1310_53527} {RNA815_58531}
27. MligTC455_04889 135 2.82 Mlig455_015062, Mlig455_027143

Neo: -

Age: -

 ENPP2, ENPP6 0.96 - - 0.960 - - -

Mlig455_015062 {REF} {Length: 850} {TRANSSPLICED} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=81.7]} {Human: ENSG00000136960, ENPP2, ectonucleotide pyrophosphatase/phosphodiesterase 2, [Score=77.0, Expect=5e-16]} {Mouse: ENSMUSG00000038173, Enpp6, ectonucleotide pyrophosphatase/phosphodiesterase 6, [Score=75.5, Expect=2e-16]; ENSMUSG00000022425, Enpp2, ectonucleotide pyrophosphatase/phosphodiesterase 2, [Score=75.1, Expect=1e-15]} {Celegans: WBGene00007753, C27A7.1, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1, [Score=65.9, Expect=1e-12]} {Smed: dd_Smed_v6_1269_0_1, dd_Smed_v6_1269_0_1, [Score=117, Expect=5e-31]} {RNA1509_26890} {RNA1310_15252} {RNA815_20232}

Mlig455_027143 {REF} {Length: 4109} {TRANSSPLICED} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=125.6]} {Human: ENSG00000164303, ENPP6, ectonucleotide pyrophosphatase/phosphodiesterase 6, [Score=167, Expect=1e-45]} {Mouse: ENSMUSG00000038173, Enpp6, ectonucleotide pyrophosphatase/phosphodiesterase 6, [Score=168, Expect=4e-46]} {Celegans: WBGene00007753, C27A7.1, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1, [Score=80.5, Expect=1e-15]} {Smed: dd_Smed_v6_1269_0_1, dd_Smed_v6_1269_0_1, [RH, Score=218, Expect=2e-65]} {RNA1509_44891, RNA1509_53042} {RNA1310_16164.1, RNA1509_44891} {RNA1509_44891, RNA815_10561}
28. MligTC455_56264 21 0.44 Mlig455_057708

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_057708 {REF} {Length: 755} {RNA1509_18097} {RNA1310_18939} {RNA815_5467.1}
29. MligTC455_28586 32 0.66 Mlig455_032084

Neo: -

Age: Up-Down-Down

 0.958 - - - - - 0.958 Mlig455_032084 {REF} {Length: 7595} {RNA1509_42521, RNA1509_44223, RNA1509_46209} {RNA1310_31499, RNA1509_42521, RNA1509_46209} {RNA1509_42521, RNA1509_46209, RNA815_19070}
30. MligTC455_18401 44 0.92 Mlig455_060625

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_060625 {REF} {Length: 2190} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_33283} {RNA815_55541}
31. MligTC455_27802 89 1.86 Mlig455_057249

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_057249 {REF} {Length: 8422} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=129.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.3]; Integrase zinc binding domain [PF17921.3, score=71.9]; Integrase core domain [PF00665.28, score=47.6]; Aspartyl protease [PF13650.8, score=39.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.0]; Retroviral aspartyl protease [PF00077.22, score=28.6]; Aspartyl protease [PF09668.12, score=23.4]; Putative peptidase (DUF1758) [PF05585.14, score=22.5]; Retroviral aspartyl protease [PF08284.13, score=19.6]; DDE superfamily endonuclease [PF13358.8, score=19.1]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=342, Expect=8e-103]} {RNA1509_28802} {RNA1310_131.1} {RNA815_52.1}
32. MligTC455_24711 46 0.96 Mlig455_015705

Neo: -

Age: -

Regeneration-upregulated BL: 6.967

Regeneration-enriched BL: 6.967

 0.956 - - - - - 0.956 Mlig455_015705 {REF} {Length: 1380} {NoTransDecoderORF} {RNA1509_40708} {RNA1310_77515} {RNA815_26884}
33. MligTC455_28129 100 2.08 Mlig455_006881

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_006881 {REF} {Length: 3777} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
34. MligTC455_41576 62 1.29 Mlig455_041268, Mlig455_056183

Neo: -

Age: Down-Up-Up

 CPA2 0.955 - - 0.955 - - -

Mlig455_041268 {REF} {Length: 3226} {Pfam: Zinc carboxypeptidase [PF00246.26, score=244.4]; Carboxypeptidase activation peptide [PF02244.18, score=24.8]} {Human: ENSG00000158516, CPA2, carboxypeptidase A2, [Score=182, Expect=9e-52]; ENSG00000165078, CPA6, carboxypeptidase A6, [Score=178, Expect=3e-50]; ENSG00000144410, CPO, carboxypeptidase O, [Score=177, Expect=2e-50]; ENSG00000128510, CPA4, carboxypeptidase A4, [Score=174, Expect=4e-49]} {Mouse: ENSMUSG00000071553, Cpa2, carboxypeptidase A2, pancreatic, [Score=187, Expect=4e-54]; ENSMUSG00000042501, Cpa6, carboxypeptidase A6, [Score=186, Expect=2e-53]; ENSMUSG00000054446, Cpa1, carboxypeptidase A1, pancreatic, [Score=179, Expect=7e-51]} {Dmel: FBgn0029804, CG3097, [RH, Score=215, Expect=3e-64]} {Celegans: WBGene00020281, T06A4.1, [RH, Score=225, Expect=1e-66]} {Smed: dd_Smed_v6_5999_0_1, dd_Smed_v6_5999_0_1, [RH, Score=247, Expect=3e-77]} {RNA1509_12605} {RNA1310_10687.1} {RNA815_3959.1}

Mlig455_056183 {REF} {Length: 2098} {Pfam: Zinc carboxypeptidase [PF00246.26, score=244.5]; Carboxypeptidase activation peptide [PF02244.18, score=24.0]} {Human: ENSG00000158516, CPA2, carboxypeptidase A2, [Score=182, Expect=6e-52]; ENSG00000144410, CPO, carboxypeptidase O, [Score=179, Expect=3e-51]; ENSG00000165078, CPA6, carboxypeptidase A6, [Score=178, Expect=3e-50]; ENSG00000128510, CPA4, carboxypeptidase A4, [Score=175, Expect=4e-49]} {Mouse: ENSMUSG00000071553, Cpa2, carboxypeptidase A2, pancreatic, [Score=188, Expect=2e-54]; ENSMUSG00000042501, Cpa6, carboxypeptidase A6, [Score=187, Expect=1e-53]} {Dmel: FBgn0029804, CG3097, [RH, Score=216, Expect=1e-64]} {Celegans: WBGene00020281, T06A4.1, [RH, Score=222, Expect=6e-66]} {Smed: dd_Smed_v6_5999_0_1, dd_Smed_v6_5999_0_1, [RH, Score=248, Expect=3e-77]} {RNA1509_12605} {RNA1310_10687.1} {RNA815_3959.1}
35. MligTC455_49308 26 0.55 Mlig455_055283

Neo: -

Age: -

 ZAN 0.955 - - - - - 0.955 Mlig455_055283 {REF} {Length: 2486} {Pfam: Glycine rich protein [PF12810.9, score=31.8]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=65.1, Expect=4e-10]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=61.6, Expect=3e-09]} {Dmel: FBgn0053196, dpy, dumpy, [Score=51.6, Expect=3e-06]} {RNA1310_18897} {RNA815_40026}
36. MligTC455_47068 69 1.43 Mlig455_060910

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_060910 {REF} {Length: 1012}
37. MligTC455_31215 39 0.8 Mlig455_001130

Neo: -

Age: -

Regeneration-upregulated R5: 6.163

Regeneration-enriched R5: 6.163

 0.953 - - - - - 0.953 Mlig455_001130 {REF} {Length: 3151} {RNA1310_23510} {RNA815_21831}
38. MligTC455_25287 78 1.62 Mlig455_016988, Mlig455_021241, Mlig455_069255

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-2.192

 FCN2 0.951 - - - - - 0.951

Mlig455_016988 {REF} {Length: 1045} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=147.6]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=141, Expect=1e-39]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=134, Expect=1e-35]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=134, Expect=8e-36]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=133, Expect=1e-36]} {Dmel: FBgn0030163, CG1791, [RH, Score=120, Expect=9e-32]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=105, Expect=2e-25]} {RNA1310_48119} {RNA815_52558}

Mlig455_021241 {REF} {Length: 1723} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=97.3]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=104, Expect=2e-24]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=100, Expect=4e-22]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=102, Expect=8e-24]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=101, Expect=1e-22]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=99.0, Expect=5e-22]; ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=97.1, Expect=2e-21]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=97.1, Expect=3e-21]} {Dmel: FBgn0030163, CG1791, [Score=97.4, Expect=4e-22]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=88.6, Expect=1e-18]} {RNA1509_12256} {RNA1310_326} {RNA815_351.1}

Mlig455_069255 {REF} {Length: 8909} {RNA1509_33647, RNA1509_36216} {RNA1310_15325.1, RNA1509_33647, RNA1509_36216} {RNA1509_33647, RNA1509_36216, RNA815_10965}
39. MligTC455_36185 71 1.48 Mlig455_035985

Neo: -

Age: -

 KCNH7 0.951 - - - - - 0.951 Mlig455_035985 {REF} {Length: 3355} {Pfam: Ion transport protein [PF00520.33, score=118.6]; Ion channel [PF07885.18, score=46.2]; PAS domain [PF13426.9, score=44.5]; Cyclic nucleotide-binding domain [PF00027.31, score=43.8]; PAS fold [PF00989.27, score=22.5]; PAS fold [PF08447.14, score=21.9]} {Human: ENSG00000184611, KCNH7, potassium voltage-gated channel subfamily H member 7, [Score=795, Expect=0.0]; ENSG00000173826, KCNH6, potassium voltage-gated channel subfamily H member 6, [Score=786, Expect=0.0]; ENSG00000055118, KCNH2, potassium voltage-gated channel subfamily H member 2, [Score=773, Expect=0.0]} {Mouse: ENSMUSG00000059742, Kcnh7, potassium voltage-gated channel, subfamily H (eag-related), member 7, [Score=795, Expect=0.0]; ENSMUSG00000001901, Kcnh6, potassium voltage-gated channel, subfamily H (eag-related), member 6, [Score=794, Expect=0.0]; ENSMUSG00000038319, Kcnh2, potassium voltage-gated channel, subfamily H (eag-related), member 2, [Score=774, Expect=0.0]} {Dmel: FBgn0003353, sei, seizure, [Score=741, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=714, Expect=0.0]} {Smed: dd_Smed_v6_12621_0_1, dd_Smed_v6_12621_0_1, [Score=775, Expect=0.0]} {RNA1509_16542} {RNA1310_5129.1} {RNA815_4089.1}
40. MligTC455_39058 37 0.77 Mlig455_039326

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_039326 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_104321}
41. MligTC455_26337 37 0.78 Mlig455_056972

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_056972 {REF} {Length: 3221} {RNA1310_50367} {RNA815_32658}
42. MligTC455_27911 45 0.94 Mlig455_049225, Mlig455_049228

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.777

 FAT4 0.95 - - - - - 0.950

Mlig455_049225 {REF} {Length: 12873} {Pfam: Cadherin domain [PF00028.19, score=824.7]; Cadherin prodomain like [PF08758.13, score=35.4]; Cadherin-like [PF16184.7, score=28.6]; Peptidase propeptide and YPEB domain [PF03413.21, score=22.0]; Bacterial cadherin-like domain [PF17803.3, score=19.8]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=310, Expect=1e-83]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=368, Expect=4e-101]} {Dmel: FBgn0001075, ft, fat, [Score=283, Expect=2e-75]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=176, Expect=4e-43]} {Smed: dd_Smed_v6_12895_0_1, dd_Smed_v6_12895_0_1, [Score=155, Expect=2e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}

Mlig455_049228 {REF} {Length: 24107} {Pfam: Cadherin domain [PF00028.19, score=1466.0]; RET Cadherin like domain 1 [PF17756.3, score=58.7]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=48.5]; Cadherin-like [PF16184.7, score=34.1]; Cadherin prodomain like [PF08758.13, score=29.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=396, Expect=8e-109]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=389, Expect=5e-107]} {Dmel: FBgn0001075, ft, fat, [Score=334, Expect=1e-90]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=183, Expect=5e-45]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=158, Expect=1e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}
43. MligTC455_31325 78 1.62 Mlig455_026709, Mlig455_044580, Mlig455_050736, Mlig455_050745

Neo: -

Age: -

 0.95 - - - - - 0.950

Mlig455_026709 {REF} {Length: 5107} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.6]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=19.1]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.1, Expect=2e-12]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_044580 {REF} {Length: 2183} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.6]} {RNA1509_47056} {RNA1310_3828} {RNA815_6291.1}

Mlig455_050736 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=7e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}

Mlig455_050745 {REF} {Length: 1565} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=7e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}
44. MligTC455_46554 47 0.97 Mlig455_038253

Neo: -

Age: logFC(26M/2M)=-0.562

 0.95 - - - - - 0.950 Mlig455_038253 {REF} {Length: 1890} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=60.6]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=94.4, Expect=7e-24]} {RNA1310_40614} {RNA815_32173}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA