TomoSeq data search

Data search

Results for MligTC455_11543

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11543	11	0.23	Mlig455_014605	Neo: - Age: -	CHRNA4	Mlig455_014605 {REF} {Length: 2889} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=194.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=128.2]} {Human: ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=246, Expect=5e-72]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=2e-72]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=2e-72]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=242, Expect=6e-72]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=236, Expect=3e-69]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=243, Expect=4e-72]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=236, Expect=2e-69]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=260, Expect=7e-79]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=244, Expect=4e-73]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [RH, Score=525, Expect=2e-179]} {RNA1509_49660} {RNA1310_9527.1, RNA1509_49660} {RNA1509_49660, RNA815_12587}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_11543

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_11543

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_11543	11	0.23	Mlig455_014605	Neo: - Age: -	CHRNA4	1	-	-	-	-	1.000	-	Mlig455_014605 {REF} {Length: 2889} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=194.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=128.2]} {Human: ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=246, Expect=5e-72]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=2e-72]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=2e-72]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=242, Expect=6e-72]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=236, Expect=3e-69]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=243, Expect=4e-72]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=236, Expect=2e-69]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=260, Expect=7e-79]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=244, Expect=4e-73]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [RH, Score=525, Expect=2e-179]} {RNA1509_49660} {RNA1310_9527.1, RNA1509_49660} {RNA1509_49660, RNA815_12587}
2.	MligTC455_17748	9	0.19	Mlig455_052149, Mlig455_060687	Neo: - Age: -	PHC2, PHC3	0.999	-	-	-	-	0.999	-	Mlig455_052149 {REF} {Length: 3350} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=35.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=21.9]} {Human: ENSG00000134686, PHC2, polyhomeotic homolog 2, [RH, Score=123, Expect=4e-28]} {Mouse: ENSMUSG00000040669, Phc1, polyhomeotic 1, [RH, Score=82.4, Expect=2e-15]; ENSMUSG00000037652, Phc3, polyhomeotic 3, [RH, Score=79.7, Expect=1e-14]; ENSMUSG00000028796, Phc2, polyhomeotic 2, [RH, Score=79.3, Expect=1e-14]} {Dmel: FBgn0004861, ph-p, polyhomeotic proximal, [RH, Score=80.9, Expect=5e-15]} {Smed: dd_Smed_v6_8875_0_1, dd_Smed_v6_8875_0_1, [RH, Score=89.7, Expect=3e-18]} {RNA1509_8576} {RNA1310_5813} {RNA815_6430} Mlig455_060687 {REF} {Length: 3077} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=35.2]; SAM domain (Sterile alpha motif) [PF07647.19, score=22.0]} {Human: ENSG00000173889, PHC3, polyhomeotic homolog 3, [RH, Score=84.7, Expect=4e-16]; ENSG00000111752, PHC1, polyhomeotic homolog 1, [RH, Score=82.4, Expect=2e-15]} {Mouse: ENSMUSG00000040669, Phc1, polyhomeotic 1, [RH, Score=82.4, Expect=2e-15]; ENSMUSG00000037652, Phc3, polyhomeotic 3, [RH, Score=79.7, Expect=1e-14]; ENSMUSG00000028796, Phc2, polyhomeotic 2, [RH, Score=79.3, Expect=1e-14]} {Dmel: FBgn0004861, ph-p, polyhomeotic proximal, [RH, Score=80.9, Expect=5e-15]} {Smed: dd_Smed_v6_8875_0_1, dd_Smed_v6_8875_0_1, [RH, Score=89.4, Expect=5e-18]} {RNA1509_8576} {RNA1310_5813, RNA1509_8576} {RNA1509_8576, RNA815_6430}
3.	MligTC455_36365	5	0.1	Mlig455_064358	Neo: - Age: -		0.997	-	-	-	-	0.997	-	Mlig455_064358 {REF} {Length: 932} {Pfam: ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=18.0]} {RNA1509_472} {RNA1310_19810.1} {RNA815_21668}
4.	MligTC455_40182	9	0.18	Mlig455_038793	Neo: - Age: -		0.997	-	-	-	-	0.997	-	Mlig455_038793 {REF} {Length: 3981} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=18.6]} {RNA1509_31679} {RNA1310_3160.1} {RNA815_32810}
5.	MligTC455_20873	15	0.31	Mlig455_030444	Neo: - Age: -		0.994	-	-	-	-	0.994	-	Mlig455_030444 {REF} {Length: 2125} {Pfam: Transposase [PF01498.20, score=68.0]; DDE superfamily endonuclease [PF13358.8, score=46.7]; Helix-turn-helix domain [PF13518.8, score=29.7]; Homeodomain-like domain [PF13384.8, score=26.1]; Winged helix-turn helix [PF13551.8, score=25.8]; Helix-turn-helix domain [PF13936.8, score=23.2]; Homeodomain-like domain [PF13565.8, score=21.3]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=149, Expect=3e-43]} {RNA1509_10864} {RNA1310_16853.1} {RNA815_5432}
6.	MligTC455_54440	4	0.08	Mlig455_037625	Neo: - Age: -		0.992	-	-	-	-	0.992	-	Mlig455_037625 {REF} {Length: 268} {NoTransDecoderORF} {RNA1509_3801} {RNA1310_19730} {RNA815_8211}
7.	MligTC455_05939	2	0.05	Mlig455_006611	Neo: - Age: -		0.991	-	-	-	-	0.991	-	Mlig455_006611 {REF} {Length: 662} {NoTransDecoderORF} {RNA1310_102292}
8.	MligTC455_10318	9	0.19	Mlig455_020020	Neo: - Age: -		0.991	-	-	-	-	0.991	-	Mlig455_020020 {REF} {Length: 543} {NoTransDecoderORF} {RNA1310_75830}
9.	MligTC455_47711	21	0.43	Mlig455_031220	Neo: - Age: -		0.991	-	-	-	-	0.991	-	Mlig455_031220 {REF} {Length: 264} {NoTransDecoderORF}
10.	MligTC455_24658	23	0.47	Mlig455_032008	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.655		0.989	-	-	-	-	0.989	-	Mlig455_032008 {REF} {Length: 2567} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=33.1]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=29.8]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_19759_0_1, dd_Smed_v6_19759_0_1, [Score=85.5, Expect=4e-18]} {RNA1310_42806} {RNA815_45324}
11.	MligTC455_53956	68	1.41	Mlig455_046324	Neo: - Age: -		0.987	-	-	-	-	0.987	-	Mlig455_046324 {REF} {Length: 3358} {RNA1310_18298} {RNA815_25523}
12.	MligTC455_43083	230	4.79	Mlig455_010304, Mlig455_010335, Mlig455_065656	Neo: - Age: -	AHNAK	0.984	-	-	-	-	0.984	-	Mlig455_010304 {REF} {Length: 1799} {TRANSSPLICED} {Human: ENSG00000124942, AHNAK, AHNAK nucleoprotein, [Score=48.9, Expect=3e-06]} {Mouse: ENSMUSG00000069833, Ahnak, AHNAK nucleoprotein (desmoyokin), [Score=54.3, Expect=2e-08]} {RNA1310_47293.1} {RNA815_36129} Mlig455_010335 {REF} {Length: 540} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_47293.1} {RNA815_36129} Mlig455_065656 {REF} {Length: 1733} {TRANSSPLICED} {RNA1310_47293.1} {RNA815_36129}
13.	MligTC455_52453	127	2.65	Mlig455_034004, Mlig455_060386	Neo: - Age: - Region-enriched R3: 3.580/0.00648		0.977	-	-	-	-	0.977	-	Mlig455_034004 {REF} {Length: 453} {NoTransDecoderORF} {RNA1509_42969} {RNA1310_78537} {RNA815_37747} Mlig455_060386 {REF} {Length: 384} {RNA1509_24113} {RNA1310_4423} {RNA815_37747}
14.	MligTC455_03058	57	1.18	Mlig455_063622	Neo: - Age: Down-Up-Down		0.975	-	-	-	-	0.975	-	Mlig455_063622 {REF} {Length: 2139} {Pfam: Lectin C-type domain [PF00059.23, score=30.0]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=58.5, Expect=2e-10]} {RNA1310_85243}
15.	MligTC455_10353	3	0.06	Mlig455_056181	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.144	STOM	0.973	-	-	-	-	0.973	-	Mlig455_056181 {REF} {Length: 2762} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=115.3]; SPFH domain-Band 7 family [PF13421.8, score=21.1]} {Human: ENSG00000148175, STOM, stomatin, [RH, Score=360, Expect=7e-125]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [RH, Score=351, Expect=8e-122]} {Dmel: FBgn0260657, CG42540, [Score=363, Expect=2e-123]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [RH, Score=385, Expect=1e-133]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [RH, Score=433, Expect=2e-154]} {RNA1509_58730} {RNA1310_19440.1, RNA1509_58730} {RNA1509_58730, RNA815_9049.1}
16.	MligTC455_20112	2	0.04	Mlig455_028978	Neo: - Age: -	IGSF9	0.973	-	-	-	-	0.973	-	Mlig455_028978 {REF} {Length: 3575} {Pfam: Immunoglobulin domain [PF13927.8, score=128.1]; Immunoglobulin I-set domain [PF07679.18, score=87.9]; Immunoglobulin domain [PF13895.8, score=82.0]; Immunoglobulin domain [PF00047.27, score=71.2]; Immunoglobulin V-set domain [PF07686.19, score=67.0]; Fibronectin type III domain [PF00041.23, score=35.3]; Izumo-like Immunoglobulin domain [PF16706.7, score=26.8]; Immunoglobulin domain [PF18452.3, score=21.8]} {Human: ENSG00000085552, IGSF9, immunoglobulin superfamily member 9, [Score=144, Expect=2e-34]; ENSG00000080854, IGSF9B, immunoglobulin superfamily member 9B, [Score=139, Expect=1e-32]} {Mouse: ENSMUSG00000037995, Igsf9, immunoglobulin superfamily, member 9, [Score=144, Expect=1e-34]} {Dmel: FBgn0028482, bdl, borderless, [Score=122, Expect=2e-28]} {Celegans: WBGene00020130, igcm-2, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=138, Expect=2e-33]} {Smed: dd_Smed_v6_17743_0_1, dd_Smed_v6_17743_0_1, [Score=142, Expect=2e-34]} {RNA1310_20896} {RNA815_31205}
17.	MligTC455_27544	39	0.81	Mlig455_032949	Neo: - Age: -	TRPM3	0.97	-	-	-	-	0.970	-	Mlig455_032949 {REF} {Length: 6125} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=51.9]; Ankyrin repeats (many copies) [PF13637.8, score=39.2]; Ankyrin repeat [PF13606.8, score=30.5]; Ankyrin repeats (many copies) [PF13857.8, score=27.8]; Ankyrin repeat [PF00023.32, score=26.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=75.9, Expect=4e-13]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.7, Expect=1e-19]} {RNA1509_21241} {RNA1310_1739} {RNA815_2547.1}
18.	MligTC455_24537	46	0.96	Mlig455_009280	Neo: - Age: logFC(26M/2M)=1.720 Region-enriched R4: 3.726/0.04899 Region-enriched R3: 3.461/0.04295	P4HB	0.967	-	-	-	-	0.967	-	Mlig455_009280 {REF} {Length: 2535} {Pfam: Thioredoxin [PF00085.22, score=151.6]; Thioredoxin-like domain [PF13848.8, score=137.0]; Thioredoxin-like [PF13905.8, score=36.7]; Calsequestrin [PF01216.19, score=30.9]; ERp29, N-terminal domain [PF07912.15, score=29.5]; Thioredoxin-like [PF13899.8, score=27.9]; Thioredoxin-like domain [PF13098.8, score=27.8]; OST3 / OST6 family, transporter family [PF04756.15, score=26.5]; AhpC/TSA family [PF00578.23, score=19.0]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [Score=416, Expect=4e-140]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [Score=416, Expect=5e-140]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [Score=381, Expect=4e-127]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=402, Expect=3e-135]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [Score=419, Expect=4e-142]} {RNA1509_26478} {RNA1310_9678, RNA1509_26478} {RNA1509_26478, RNA815_5042}
19.	MligTC455_54684	4	0.08	Mlig455_062423	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_062423 {REF} {Length: 204} {NoTransDecoderORF}
20.	MligTC455_09328	39	0.8	Mlig455_032045	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.716		0.962	-	-	-	-	0.962	-	Mlig455_032045 {REF} {Length: 2583} {Pfam: Domain of unknown function (DUF4010) [PF13194.8, score=20.4]} {RNA1310_46777} {RNA815_42352}
21.	MligTC455_30155	7	0.15	Mlig455_069271	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_069271 {REF} {Length: 3746} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.1, Expect=3e-12]} {RNA1509_47056} {RNA1310_5710.1, RNA1509_47056} {RNA1509_47056, RNA815_6291.1}
22.	MligTC455_19254	90	1.88	Mlig455_004591	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_004591 {REF} {Length: 710} {RNA1509_31473} {RNA1310_57601} {RNA815_20563}
23.	MligTC455_28284	687	14.32	Mlig455_033754	Neo: Irradiation Age: Down-Up-Down	ALG13	0.957	-	-	-	-	0.957	-	Mlig455_033754 {REF} {Length: 3417} {Human: ENSG00000101901, ALG13, ALG13, UDP-N-acetylglucosaminyltransferase subunit, [RH, Score=94.0, Expect=3e-19]} {Mouse: ENSMUSG00000036990, Otud4, OTU domain containing 4, [Score=77.0, Expect=4e-14]} {RNA1509_19781} {RNA1310_7225.1} {RNA815_3492}
24.	MligTC455_41636	50	1.04	Mlig455_000765	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_000765 {REF} {Length: 727} {RNA1310_64301}