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Results for MligTC455_30155

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30155 7 0.15 Mlig455_069271

Neo: -

Age: -

 Mlig455_069271 {REF} {Length: 3746} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.1, Expect=3e-12]} {RNA1509_47056} {RNA1310_5710.1, RNA1509_47056} {RNA1509_47056, RNA815_6291.1}

Cumulative graph for MligTC455_30155

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_30155

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30155 7 0.15 Mlig455_069271

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_069271 {REF} {Length: 3746} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.1, Expect=3e-12]} {RNA1509_47056} {RNA1310_5710.1, RNA1509_47056} {RNA1509_47056, RNA815_6291.1}
2. MligTC455_13739 27 0.57 Mlig455_003060

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.158

 GLUL 0.98 - - - - 0.980 - Mlig455_003060 {REF} {Length: 3073} {Pfam: Glutamine synthetase, beta-Grasp domain [PF03951.21, score=49.3]; Glutamine synthetase, catalytic domain [PF00120.26, score=46.0]} {Human: ENSG00000135821, GLUL, glutamate-ammonia ligase, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000026473, Glul, glutamate-ammonia ligase (glutamine synthetase), [RH, Score=522, Expect=0.0]} {Dmel: FBgn0001145, Gs2, Glutamine synthetase 2, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00001604, gln-3, Glutamine synthetase, [RH, Score=530, Expect=0.0]} {Smed: dd_Smed_v6_646_0_1, dd_Smed_v6_646_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_3029, RNA1509_54181, RNA1509_7928} {RNA1310_32301, RNA1509_3029, RNA1509_54181, RNA1509_7928}
3. MligTC455_14218 37 0.77 Mlig455_029441, Mlig455_029460

Neo: -

Age: -

 0.98 - - - - 0.980 -

Mlig455_029441 {REF} {Length: 2810} {RNA1310_70183}

Mlig455_029460 {REF} {Length: 1628} {RNA1310_70183}
4. MligTC455_39406 44 0.92 Mlig455_026121

Neo: -

Age: Up-Down-Down

 RBMS1 0.977 - - - - 0.977 - Mlig455_026121 {REF} {Length: 2550} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=40.0]} {Human: ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=106, Expect=1e-24]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=102, Expect=5e-23]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=110, Expect=4e-26]} {Dmel: FBgn0052423, shep, alan shepard, [Score=84.7, Expect=3e-17]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=100, Expect=9e-23]} {Smed: dd_Smed_v6_3832_0_1, dd_Smed_v6_3832_0_1, [RH, Score=105, Expect=9e-25]} {RNA1310_39053} {RNA815_20087}
5. MligTC455_27544 39 0.81 Mlig455_032949

Neo: -

Age: -

 TRPM3 0.976 - - - - 0.976 - Mlig455_032949 {REF} {Length: 6125} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=51.9]; Ankyrin repeats (many copies) [PF13637.8, score=39.2]; Ankyrin repeat [PF13606.8, score=30.5]; Ankyrin repeats (many copies) [PF13857.8, score=27.8]; Ankyrin repeat [PF00023.32, score=26.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=75.9, Expect=4e-13]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.7, Expect=1e-19]} {RNA1509_21241} {RNA1310_1739} {RNA815_2547.1}
6. MligTC455_08374 6 0.13 Mlig455_067349

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_067349 {REF} {Length: 119} {NoTransDecoderORF} {RNA1310_62433} {RNA815_41961}
7. MligTC455_17748 9 0.19 Mlig455_052149, Mlig455_060687

Neo: -

Age: -

 PHC2, PHC3 0.96 - - - - 0.960 -

Mlig455_052149 {REF} {Length: 3350} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=35.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=21.9]} {Human: ENSG00000134686, PHC2, polyhomeotic homolog 2, [RH, Score=123, Expect=4e-28]} {Mouse: ENSMUSG00000040669, Phc1, polyhomeotic 1, [RH, Score=82.4, Expect=2e-15]; ENSMUSG00000037652, Phc3, polyhomeotic 3, [RH, Score=79.7, Expect=1e-14]; ENSMUSG00000028796, Phc2, polyhomeotic 2, [RH, Score=79.3, Expect=1e-14]} {Dmel: FBgn0004861, ph-p, polyhomeotic proximal, [RH, Score=80.9, Expect=5e-15]} {Smed: dd_Smed_v6_8875_0_1, dd_Smed_v6_8875_0_1, [RH, Score=89.7, Expect=3e-18]} {RNA1509_8576} {RNA1310_5813} {RNA815_6430}

Mlig455_060687 {REF} {Length: 3077} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=35.2]; SAM domain (Sterile alpha motif) [PF07647.19, score=22.0]} {Human: ENSG00000173889, PHC3, polyhomeotic homolog 3, [RH, Score=84.7, Expect=4e-16]; ENSG00000111752, PHC1, polyhomeotic homolog 1, [RH, Score=82.4, Expect=2e-15]} {Mouse: ENSMUSG00000040669, Phc1, polyhomeotic 1, [RH, Score=82.4, Expect=2e-15]; ENSMUSG00000037652, Phc3, polyhomeotic 3, [RH, Score=79.7, Expect=1e-14]; ENSMUSG00000028796, Phc2, polyhomeotic 2, [RH, Score=79.3, Expect=1e-14]} {Dmel: FBgn0004861, ph-p, polyhomeotic proximal, [RH, Score=80.9, Expect=5e-15]} {Smed: dd_Smed_v6_8875_0_1, dd_Smed_v6_8875_0_1, [RH, Score=89.4, Expect=5e-18]} {RNA1509_8576} {RNA1310_5813, RNA1509_8576} {RNA1509_8576, RNA815_6430}
8. MligTC455_40182 9 0.18 Mlig455_038793

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_038793 {REF} {Length: 3981} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=18.6]} {RNA1509_31679} {RNA1310_3160.1} {RNA815_32810}
9. MligTC455_11543 11 0.23 Mlig455_014605

Neo: -

Age: -

 CHRNA4 0.959 - - - - 0.959 - Mlig455_014605 {REF} {Length: 2889} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=194.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=128.2]} {Human: ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=246, Expect=5e-72]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=2e-72]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=2e-72]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=242, Expect=6e-72]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=236, Expect=3e-69]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=243, Expect=4e-72]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=236, Expect=2e-69]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=260, Expect=7e-79]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=244, Expect=4e-73]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [RH, Score=525, Expect=2e-179]} {RNA1509_49660} {RNA1310_9527.1, RNA1509_49660} {RNA1509_49660, RNA815_12587}
10. MligTC455_36365 5 0.1 Mlig455_064358

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_064358 {REF} {Length: 932} {Pfam: ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=18.0]} {RNA1509_472} {RNA1310_19810.1} {RNA815_21668}
11. MligTC455_41126 619 12.9 Mlig455_050185

Neo: -

Age: -

Region-enriched R6: 3.273/0.00035

 0.959 - - - - 0.959 - Mlig455_050185 {REF} {Length: 671} {RNA1509_36640} {RNA1310_51392} {RNA815_51264}
12. MligTC455_05939 2 0.05 Mlig455_006611

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_006611 {REF} {Length: 662} {NoTransDecoderORF} {RNA1310_102292}
13. MligTC455_10318 9 0.19 Mlig455_020020

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_020020 {REF} {Length: 543} {NoTransDecoderORF} {RNA1310_75830}
14. MligTC455_47711 21 0.43 Mlig455_031220

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_031220 {REF} {Length: 264} {NoTransDecoderORF}

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