M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_11758

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11758 6 0.12 Mlig455_051325

Neo: -

Age: -

 ZNRF3 Mlig455_051325 {REF} {Length: 2005} {Pfam: Ring finger domain [PF13639.8, score=47.1]; RING-like zinc finger [PF17123.7, score=44.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.0]; RING-H2 zinc finger domain [PF12678.9, score=28.8]; zinc-RING finger domain [PF14634.8, score=25.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.1]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]; RING-type zinc-finger [PF13445.8, score=20.9]; ZNRF-3 Ectodomain [PF18212.3, score=20.6]} {Human: ENSG00000183579, ZNRF3, zinc and ring finger 3, [Score=91.3, Expect=2e-19]} {Mouse: ENSMUSG00000041961, Znrf3, zinc and ring finger 3, [Score=92.0, Expect=9e-20]} {Dmel: FBgn0052850, CG32850, [Score=60.8, Expect=5e-11]} {Celegans: WBGene00023404, plr-1, Probable E3 ubiquitin-protein ligase plr-1, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=70.9, Expect=1e-13]} {RNA1509_33706} {RNA1310_73291} {RNA815_59739}

Cumulative graph for MligTC455_11758

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_11758

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11758 6 0.12 Mlig455_051325

Neo: -

Age: -

 ZNRF3 2 - 1.000 - - 1.000 - Mlig455_051325 {REF} {Length: 2005} {Pfam: Ring finger domain [PF13639.8, score=47.1]; RING-like zinc finger [PF17123.7, score=44.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.0]; RING-H2 zinc finger domain [PF12678.9, score=28.8]; zinc-RING finger domain [PF14634.8, score=25.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.1]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]; RING-type zinc-finger [PF13445.8, score=20.9]; ZNRF-3 Ectodomain [PF18212.3, score=20.6]} {Human: ENSG00000183579, ZNRF3, zinc and ring finger 3, [Score=91.3, Expect=2e-19]} {Mouse: ENSMUSG00000041961, Znrf3, zinc and ring finger 3, [Score=92.0, Expect=9e-20]} {Dmel: FBgn0052850, CG32850, [Score=60.8, Expect=5e-11]} {Celegans: WBGene00023404, plr-1, Probable E3 ubiquitin-protein ligase plr-1, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=70.9, Expect=1e-13]} {RNA1509_33706} {RNA1310_73291} {RNA815_59739}
2. MligTC455_01510 11 0.22 Mlig455_022372

Neo: -

Age: -

Region-enriched R4: 7.021/0.00089

 1 - 1.000 - - - - Mlig455_022372 {REF} {Length: 718} {RNA1509_30295} {RNA1310_47656} {RNA815_19006.1}
3. MligTC455_38524 4 0.09 Mlig455_047855

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_047855 {REF} {Length: 3129} {RNA1310_22427} {RNA815_13338}
4. MligTC455_15222 6 0.13 Mlig455_036394

Neo: -

Age: -

 0.999 - 0.999 - - - - Mlig455_036394 {REF} {Length: 991} {RNA1509_2607} {RNA1310_72.1} {RNA815_4349}
5. MligTC455_09848 11 0.23 Mlig455_018139, Mlig455_018193

Neo: -

Age: -

 0.997 - 0.997 - - - -

Mlig455_018139 {REF} {Length: 612} {TRANSSPLICED} {RNA1310_46963} {RNA815_36938}

Mlig455_018193 {REF} {Length: 905} {RNA1310_46963} {RNA815_36938}
6. MligTC455_31761 3 0.05 Mlig455_051077

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.684

 0.997 - 0.997 - - - - Mlig455_051077 {REF} {Length: 2216} {RNA1509_5369} {RNA1310_10116.1} {RNA815_6716}
7. MligTC455_08533 3 0.06 Mlig455_060531

Neo: -

Age: -

 0.994 - 0.994 - - - - Mlig455_060531 {REF} {Length: 284} {NoTransDecoderORF}
8. MligTC455_56541 6 0.13 Mlig455_037485

Neo: -

Age: -

 0.994 - 0.994 - - - - Mlig455_037485 {REF} {Length: 312} {NoTransDecoderORF}
9. MligTC455_14667 6 0.12 Mlig455_023220

Neo: -

Age: -

 PIK3CA 0.993 - 0.993 - - - - Mlig455_023220 {REF} {Length: 1002} {Human: ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=113, Expect=2e-27]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=114, Expect=7e-28]} {Dmel: FBgn0015279, Pi3K92E, [Score=94.7, Expect=2e-21]} {Celegans: WBGene00000090, age-1, Phosphatidylinositol 3-kinase age-1, [Score=69.7, Expect=4e-13]} {Smed: dd_Smed_v6_8025_0_1, dd_Smed_v6_8025_0_1, [Score=108, Expect=3e-26]} {RNA1509_9204} {RNA1310_64803} {RNA815_1006}
10. MligTC455_11389 9 0.19 Mlig455_029122

Neo: -

Age: -

 ASIC5 0.992 - - - - 0.992 - Mlig455_029122 {REF} {Length: 1921} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=227.5]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=72.4, Expect=1e-12]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=84.3, Expect=8e-17]} {Celegans: WBGene00022815, asic-1, Degenerin-like protein asic-1, [Score=88.2, Expect=6e-18]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=143, Expect=6e-36]} {RNA1310_42486} {RNA815_46419}
11. MligTC455_12282 7 0.15 Mlig455_060014

Neo: -

Age: -

 PRR9 0.991 - 0.991 - - - - Mlig455_060014 {REF} {Length: 2297} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=1e-05]}
12. MligTC455_31085 56 1.17 Mlig455_012955

Neo: -

Age: -

Region-enriched R4: 4.450/0.01398

 ZFAND4 0.989 - - - - 0.989 - Mlig455_012955 {REF} {Length: 3260} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=53.8]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=25.1]; Ubiquitin-like domain [PF14560.8, score=19.5]} {Human: ENSG00000172671, ZFAND4, zinc finger AN1-type containing 4, [RH, Score=146, Expect=5e-39]} {Mouse: ENSMUSG00000042213, Zfand4, zinc finger, AN1-type domain 4, [RH, Score=150, Expect=2e-40]} {Dmel: FBgn0003941, RpL40, Ribosomal protein L40, [Score=64.3, Expect=1e-12]} {Celegans: WBGene00006728, ubq-2, Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40, [Score=62.0, Expect=7e-12]} {Smed: dd_Smed_v6_4992_0_1, dd_Smed_v6_4992_0_1, [RH, Score=141, Expect=1e-38]} {RNA1509_11475, RNA1509_27952} {RNA1310_28869, RNA1509_27952} {RNA1509_27952, RNA815_6580}
13. MligTC455_06999 7 0.14 Mlig455_013880, Mlig455_057729, Mlig455_059958

Neo: -

Age: -

 0.984 - 0.984 - - - -

Mlig455_013880 {REF} {Length: 292} {NoTransDecoderORF} {RNA1310_41119} {RNA815_15825}

Mlig455_057729 {REF} {Length: 463} {NoTransDecoderORF} {RNA1310_41119} {RNA815_15825}

Mlig455_059958 {REF} {Length: 359} {NoTransDecoderORF} {RNA1310_41119} {RNA815_15825}
14. MligTC455_28001 57 1.19 Mlig455_000099

Neo: -

Age: Down-Down-Up

 SIDT2 0.984 - - - - 0.984 - Mlig455_000099 {REF} {Length: 4002} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=679.3]} {Human: ENSG00000149577, SIDT2, SID1 transmembrane family member 2, [Score=534, Expect=1e-176]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=460, Expect=7e-149]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [RH, Score=293, Expect=4e-87]} {Smed: dd_Smed_v6_6063_0_1, dd_Smed_v6_6063_0_1, [RH, Score=516, Expect=2e-171]} {RNA1509_19245} {RNA1310_3733} {RNA815_12922}
15. MligTC455_05838 8 0.16 Mlig455_001943

Neo: -

Age: -

 0.983 - 0.983 - - - - Mlig455_001943 {REF} {Length: 603} {NoTransDecoderORF} {RNA1310_58091}
16. MligTC455_15790 6 0.13 Mlig455_061100

Neo: -

Age: -

 0.983 - - - - 0.983 - Mlig455_061100 {REF} {Length: 1129} {RNA1310_71184}
17. MligTC455_07653 93 1.94 Mlig455_005690

Neo: -

Age: -

Region-enriched R4: 3.056/0.03657

 0.981 - - - - 0.981 - Mlig455_005690 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_20118} {RNA1310_60500} {RNA815_43456}
18. MligTC455_09326 21 0.44 Mlig455_003882

Neo: -

Age: -

Region-enriched R4: 5.436/0.02066

 0.981 - 0.981 - - - - Mlig455_003882 {REF} {Length: 401} {NoTransDecoderORF} {RNA1509_52711} {RNA1310_28410} {RNA815_12271}
19. MligTC455_10947 15 0.31 Mlig455_050032

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_050032 {REF} {Length: 309} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46344} {RNA1310_4333.2} {RNA815_13389}
20. MligTC455_11531 195 4.05 Mlig455_053957, Mlig455_054028, Mlig455_066496

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 5.036/0.00002

 0.978 - 0.978 - - - -

Mlig455_053957 {REF} {Length: 2036} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=112.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=51.5]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.7]} {Dmel: FBgn0033579, CG13229, [Score=132, Expect=3e-34]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=138, Expect=3e-36]} {Smed: dd_Smed_v6_22525_0_1, dd_Smed_v6_22525_0_1, [Score=168, Expect=4e-48]} {RNA1509_39121} {RNA1310_40044} {RNA815_26967}

Mlig455_054028 {REF} {Length: 2029} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=112.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=51.5]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.7]} {Dmel: FBgn0033579, CG13229, [Score=132, Expect=3e-34]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=138, Expect=3e-36]} {Smed: dd_Smed_v6_22525_0_1, dd_Smed_v6_22525_0_1, [Score=168, Expect=4e-48]} {RNA1509_39121} {RNA1310_40044} {RNA815_26967}

Mlig455_066496 {REF} {Length: 1948} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=112.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=51.5]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.7]} {Dmel: FBgn0033579, CG13229, [Score=132, Expect=3e-34]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=138, Expect=3e-36]} {Smed: dd_Smed_v6_22525_0_1, dd_Smed_v6_22525_0_1, [Score=168, Expect=4e-48]} {RNA1509_39121} {RNA1310_40044} {RNA815_26967}
21. MligTC455_20034 21 0.43 Mlig455_062808

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.906

 0.978 - 0.978 - - - - Mlig455_062808 {REF} {Length: 1094} {RNA1509_40334} {RNA1310_37951} {RNA815_18858.1}
22. MligTC455_05452 12 0.25 Mlig455_041935

Neo: Germline

Age: Up-Down-Down

 0.977 - 0.977 - - - - Mlig455_041935 {REF} {Length: 1279} {NoTransDecoderORF} {RNA1509_56527} {RNA1310_20359} {RNA815_3391.1}
23. MligTC455_13374 5 0.11 Mlig455_051045

Neo: -

Age: -

 0.977 - 0.977 - - - - Mlig455_051045 {REF} {Length: 531} {NoTransDecoderORF} {RNA1509_36030} {RNA1310_33431.1} {RNA815_32123}
24. MligTC455_18998 8 0.16 Mlig455_001210

Neo: -

Age: -

 0.977 - 0.977 - - - - Mlig455_001210 {REF} {Length: 578} {NoTransDecoderORF} {RNA1310_49000} {RNA815_33489}
25. MligTC455_09327 39 0.8 Mlig455_003671, Mlig455_003716

Neo: -

Age: -

Region-enriched R4: 6.316/0.00002

 0.976 - 0.976 - - - -

Mlig455_003671 {REF} {Length: 599} {NoTransDecoderORF} {RNA1509_21796} {RNA1310_28410} {RNA815_12271}

Mlig455_003716 {REF} {Length: 422} {NoTransDecoderORF} {RNA1509_21796} {RNA1310_28410} {RNA815_12271}
26. MligTC455_56630 3 0.05 Mlig455_054621

Neo: -

Age: -

 0.974 - 0.974 - - - - Mlig455_054621 {REF} {Length: 564} {RNA1310_65665} {RNA815_27821}
27. MligTC455_32232 9 0.19 Mlig455_041146, Mlig455_070069

Neo: -

Age: -

 KCNA1, KCNA2 0.972 - - - - 0.972 -

Mlig455_041146 {REF} {Length: 2621} {Pfam: Ion transport protein [PF00520.33, score=142.2]; BTB/POZ domain [PF02214.24, score=79.6]; Ion channel [PF07885.18, score=52.7]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [Score=385, Expect=1e-128]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [Score=385, Expect=3e-128]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [Score=372, Expect=3e-121]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [Score=371, Expect=7e-122]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [Score=385, Expect=1e-128]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [Score=385, Expect=1e-128]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [Score=372, Expect=3e-121]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [Score=371, Expect=1e-122]} {Dmel: FBgn0003380, Sh, Shaker, [Score=393, Expect=7e-130]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [Score=281, Expect=2e-89]} {Smed: dd_Smed_v6_15133_0_1, dd_Smed_v6_15133_0_1, [RH, Score=549, Expect=0.0]} {RNA1509_46497} {RNA1310_11183} {RNA815_45289}

Mlig455_070069 {REF} {Length: 2734} {Pfam: Ion transport protein [PF00520.33, score=142.2]; BTB/POZ domain [PF02214.24, score=79.6]; Ion channel [PF07885.18, score=52.7]} {Human: ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [Score=385, Expect=3e-128]; ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [Score=385, Expect=1e-128]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [Score=372, Expect=3e-121]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [Score=371, Expect=8e-122]} {Mouse: ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [Score=385, Expect=1e-128]; ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [Score=385, Expect=1e-128]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [Score=371, Expect=3e-121]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [Score=371, Expect=1e-122]; ENSMUSG00000045534, Kcna5, potassium voltage-gated channel, shaker-related subfamily, member 5, [Score=366, Expect=1e-119]} {Dmel: FBgn0003380, Sh, Shaker, [Score=394, Expect=3e-130]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [Score=281, Expect=2e-89]} {Smed: dd_Smed_v6_15133_0_1, dd_Smed_v6_15133_0_1, [RH, Score=549, Expect=0.0]} {RNA1509_46497} {RNA1310_11183} {RNA815_45289}
28. MligTC455_09245 14 0.29 Mlig455_067982

Neo: -

Age: -

 0.968 - 0.968 - - - - Mlig455_067982 {REF} {Length: 761} {NoTransDecoderORF} {RNA1310_57536}
29. MligTC455_33798 7 0.14 Mlig455_027571

Neo: -

Age: Up-Down-Down

 0.966 - 0.966 - - - - Mlig455_027571 {REF} {Length: 843} {NoTransDecoderORF} {RNA1509_22826} {RNA1310_29458} {RNA815_7849.1}
30. MligTC455_00527 5 0.11 Mlig455_047448

Neo: -

Age: -

 0.964 - 0.964 - - - - Mlig455_047448 {REF} {Length: 362} {NoTransDecoderORF} {RNA1509_12449} {RNA1310_75600} {RNA815_1472}
31. MligTC455_38248 20 0.41 Mlig455_059879

Neo: -

Age: -

Region-enriched R4: 4.946/0.00630

 0.964 - 0.964 - - - - Mlig455_059879 {REF} {Length: 856} {RNA1509_26468} {RNA1310_62622} {RNA815_52251}
32. MligTC455_50079 25 0.51 Mlig455_003362

Neo: -

Age: -

 SLC26A2 0.964 - 0.964 - - - - Mlig455_003362 {REF} {Length: 2587} {Pfam: Sulfate permease family [PF00916.22, score=287.8]; STAS domain [PF01740.23, score=66.3]; STAS domain [PF13466.8, score=25.8]} {Human: ENSG00000155850, SLC26A2, solute carrier family 26 member 2, [Score=312, Expect=1e-95]; ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=307, Expect=1e-93]} {Mouse: ENSMUSG00000034320, Slc26a2, solute carrier family 26 (sulfate transporter), member 2, [Score=314, Expect=3e-96]; ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=311, Expect=3e-95]; ENSMUSG00000040441, Slc26a10, solute carrier family 26, member 10, [Score=300, Expect=9e-92]} {Dmel: FBgn0036770, Prestin, [Score=272, Expect=1e-80]} {Celegans: WBGene00013963, sulp-8, Anion transporter SULP-8a; Anion transporter SULP-8b; SULfate Permease family, [Score=320, Expect=2e-100]} {Smed: dd_Smed_v6_16869_0_1, dd_Smed_v6_16869_0_1, [Score=397, Expect=6e-131]} {RNA1509_41170} {RNA1310_1621.1} {RNA815_14105}
33. MligTC455_02321 18 0.37 Mlig455_070186

Neo: -

Age: Up-Down-Down

 0.963 - 0.963 - - - - Mlig455_070186 {REF} {Length: 1261} {Pfam: Outer membrane protein beta-barrel family [PF14905.8, score=20.7]} {RNA1509_41798} {RNA1310_83014} {RNA815_8731.3}
34. MligTC455_38259 15 0.31 Mlig455_013876

Neo: -

Age: -

 0.963 - 0.963 - - - - Mlig455_013876 {REF} {Length: 915} {Pfam: Phage integrase family [PF00589.24, score=28.6]} {RNA1509_53634} {RNA1310_18683.2} {RNA815_21763}
35. MligTC455_03974 72 1.5 Mlig455_051748

Neo: Germline

Age: -

Region-specific R4: 6.324

Region-enriched R4: 4.318/0.00018

 0.962 - 0.962 - - - - Mlig455_051748 {REF} {Length: 1851} {RNA1509_33529} {RNA1310_19161} {RNA815_17809.1}
36. MligTC455_03973 66 1.38 Mlig455_051725

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.259

Region-enriched R4: 4.809/0.00004

 0.96 - 0.960 - - - - Mlig455_051725 {REF} {Length: 1136} {RNA1509_33529} {RNA1310_20808} {RNA815_17809.1}
37. MligTC455_10808 20 0.42 Mlig455_016339

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_016339 {REF} {Length: 571} {NoTransDecoderORF} {RNA1310_52020.2} {RNA815_43280}
38. MligTC455_21450 6 0.12 Mlig455_014542

Neo: -

Age: -

 0.96 - 0.960 - - - - Mlig455_014542 {REF} {Length: 1521} {Pfam: Integrase core domain [PF00665.28, score=50.6]; Integrase core domain [PF13683.8, score=20.0]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=62.4, Expect=5e-11]} {RNA1509_16321} {RNA1310_20361} {RNA815_60955}
39. MligTC455_14082 30 0.62 Mlig455_062323

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_062323 {REF} {Length: 874} {TRANSSPLICED} {Pfam: Asparaginase, N-terminal [PF00710.22, score=55.9]} {RNA1310_56701}
40. MligTC455_38845 9 0.2 Mlig455_067034

Neo: -

Age: -

 0.957 - 0.957 - - - - Mlig455_067034 {REF} {Length: 565} {NoTransDecoderORF} {RNA1509_53927} {RNA1310_63059.1} {RNA815_12082.2}
41. MligTC455_47401 7 0.15 Mlig455_026016

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_026016 {REF} {Length: 1087} {RNA1310_29382} {RNA815_57261}
42. MligTC455_48519 4 0.08 Mlig455_037273

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_037273 {REF} {Length: 1443} {RNA1509_50708} {RNA1310_13399} {RNA815_37930}
43. MligTC455_26110 35 0.72 Mlig455_009326

Neo: -

Age: -

Regeneration-upregulated BL: 7.026

Regeneration-enriched BL: 7.026

 0.954 - 0.954 - - - - Mlig455_009326 {REF} {Length: 2377} {RNA1509_41127} {RNA1310_28088} {RNA815_5881.1}
44. MligTC455_52842 5 0.1 Mlig455_055679

Neo: -

Age: -

 ANGPTL7 0.954 - - - - 0.954 - Mlig455_055679 {REF} {Length: 1150} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=103.1]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=86.7, Expect=7e-19]; ENSG00000116147, TNR, tenascin R, [Score=86.7, Expect=2e-18]; ENSG00000120332, TNN, tenascin N, [Score=85.9, Expect=4e-18]; ENSG00000171560, FGA, fibrinogen alpha chain, [Score=82.4, Expect=6e-17]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=85.5, Expect=4e-18]; ENSMUSG00000015829, Tnr, tenascin R, [Score=84.0, Expect=1e-17]; ENSMUSG00000026938, Fcna, ficolin A, [Score=83.6, Expect=5e-18]; ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=82.8, Expect=9e-18]} {Dmel: FBgn0050280, CG30280, [Score=75.1, Expect=2e-15]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=82.4, Expect=1e-17]} {RNA1310_126384}
45. MligTC455_32276 18 0.38 Mlig455_030038, Mlig455_030039

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_030038 {REF} {Length: 1305} {Pfam: Integrase core domain [PF00665.28, score=52.1]; Integrase zinc binding domain [PF17921.3, score=51.0]; H2C2 zinc finger [PF09337.12, score=23.0]; DDE superfamily endonuclease [PF13358.8, score=21.6]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=101, Expect=9e-24]} {RNA1509_60111} {RNA1310_1717.1} {RNA815_20221.1}

Mlig455_030039 {REF} {Length: 2403} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=56.7]} {Smed: dd_Smed_v6_14472_0_32, dd_Smed_v6_14472_0_32, [Score=67.8, Expect=1e-14]} {RNA1509_60111} {RNA1310_1717.1} {RNA815_59678}
46. MligTC455_38806 22 0.45 Mlig455_020655

Neo: Int S/G2/M

Age: Down-Up-Down

 0.952 - 0.952 - - - - Mlig455_020655 {REF} {Length: 3082} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.9]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=85.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=83.9]; Integrase zinc binding domain [PF17921.3, score=64.8]; Integrase core domain [PF00665.28, score=50.8]; H2C2 zinc finger [PF09337.12, score=20.3]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=55.5, Expect=3e-07]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=55.5, Expect=3e-07]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=247, Expect=6e-69]} {RNA1509_37828} {RNA1310_2289, RNA1509_37828} {RNA1509_37828, RNA815_3168.1}
47. MligTC455_42025 17 0.36 Mlig455_006557, Mlig455_006670

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.911

 CHRM3, HRH1 0.952 - - - - 0.952 -

Mlig455_006557 {REF} {Length: 2091} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=215.6]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.5]} {Human: ENSG00000196639, HRH1, histamine receptor H1, [Score=216, Expect=3e-64]} {Mouse: ENSMUSG00000053004, Hrh1, histamine receptor H1, [Score=216, Expect=2e-64]} {Dmel: FBgn0263116, 5-HT1B, 5-hydroxytryptamine (serotonin) receptor 1B, [Score=142, Expect=2e-36]} {Celegans: WBGene00016872, dop-4, Dopamine receptor 4, [Score=156, Expect=2e-42]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [Score=155, Expect=8e-42]} {RNA1310_46689} {RNA815_30833}

Mlig455_006670 {REF} {Length: 2649} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=215.7]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.5]} {Human: ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [Score=177, Expect=4e-49]} {Mouse: ENSMUSG00000053004, Hrh1, histamine receptor H1, [Score=215, Expect=3e-64]} {Dmel: FBgn0038653, CG18208, [Score=150, Expect=2e-39]} {Celegans: WBGene00016872, dop-4, Dopamine receptor 4, [Score=157, Expect=1e-42]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [Score=155, Expect=5e-42]} {RNA1310_46689} {RNA815_30833}
48. MligTC455_14087 22 0.46 Mlig455_005059

Neo: -

Age: -

 SEC14L4 0.951 - 0.951 - - - - Mlig455_005059 {REF} {Length: 2564} {Pfam: CRAL/TRIO domain [PF00650.22, score=80.6]} {Human: ENSG00000133488, SEC14L4, SEC14 like lipid binding 4, [Score=145, Expect=5e-40]; ENSG00000100003, SEC14L2, SEC14 like lipid binding 2, [Score=140, Expect=7e-38]; ENSG00000214491, SEC14L6, SEC14 like lipid binding 6, [Score=139, Expect=3e-37]} {Mouse: ENSMUSG00000003585, Sec14l2, SEC14-like lipid binding 2, [Score=145, Expect=1e-39]; ENSMUSG00000054986, Sec14l3, SEC14-like lipid binding 3, [Score=142, Expect=2e-38]} {Dmel: FBgn0035146, CG13893, [Score=92.8, Expect=8e-21]} {Celegans: WBGene00011962, T23G5.2, CRAL-TRIO domain-containing protein T23G5.2, [Score=104, Expect=1e-24]} {Smed: dd_Smed_v6_12821_0_1, dd_Smed_v6_12821_0_1, [Score=155, Expect=8e-44]} {RNA1509_29843} {RNA1310_31007} {RNA815_24143}
49. MligTC455_34400 19 0.4 Mlig455_015681

Neo: Irradiation

Age: -

 0.951 - 0.951 - - - - Mlig455_015681 {REF} {Length: 2461} {RNA1509_42201} {RNA1310_12457} {RNA815_4461}
50. MligTC455_03199 8 0.17 Mlig455_067369

Neo: -

Age: -

 0.95 - 0.950 - - - - Mlig455_067369 {REF} {Length: 128} {NoTransDecoderORF} {RNA1509_53944} {RNA1310_132206} {RNA815_30349}
51. MligTC455_39198 13 0.26 Mlig455_008470, Mlig455_008478, Mlig455_009924

Neo: -

Age: -

 0.95 - 0.950 - - - -

Mlig455_008470 {REF} {Length: 1982} {RNA1509_8399} {RNA1310_67344} {RNA815_51157}

Mlig455_008478 {REF} {Length: 1387} {RNA1509_8399} {RNA1310_67344} {RNA815_51157}

Mlig455_009924 {REF} {Length: 670} {RNA1509_8399} {RNA1310_67344} {RNA815_51157}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA