Data search
Results for MligTC455_23994
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23994 | 93 | 1.95 | Mlig455_048700 | Neo: - Age: - |
KDM6A | Mlig455_048700 {REF} {Length: 4708} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=104.2]; WD domain, G-beta repeat [PF00400.34, score=45.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=19.3]} {Human: ENSG00000147050, KDM6A, lysine demethylase 6A, [RH, Score=586, Expect=0.0]; ENSG00000183878, UTY, ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, [RH, Score=577, Expect=0.0]; ENSG00000132510, KDM6B, lysine demethylase 6B, [RH, Score=560, Expect=4e-175]} {Mouse: ENSMUSG00000037369, Kdm6a, lysine (K)-specific demethylase 6A, [RH, Score=589, Expect=0.0]; ENSMUSG00000018476, Kdm6b, KDM1 lysine (K)-specific demethylase 6B, [RH, Score=560, Expect=9e-176]} {Dmel: FBgn0260749, Utx, Utx histone demethylase, [Score=590, Expect=0.0]} {Celegans: WBGene00017046, utx-1, UTX (Ubiquitously transcribed TPR on X) homolog, [RH, Score=422, Expect=9e-129]} {Smed: dd_Smed_v6_5837_0_1, dd_Smed_v6_5837_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_48790} {RNA1310_10269.1} {RNA815_1846} |
Cumulative graph for MligTC455_23994
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.348 | 1.96 | 0.26662 | 0.91601 | |
| RegionR2 | 1.454 | 1.96 | 0.21878 | 0.58684 | |
| RegionR3 | 0.781 | 1.96 | 0.44017 | 0.95647 | |
| RegionR4 | -0.039 | 1.96 | 0.87183 | 1.00000 | |
| RegionR5 | 1.869 | 1.96 | 0.00891 | 0.05310 | |
| RegionR6 | 1.424 | 1.96 | 0.12595 | 0.64439 | |
| RegionR7 | -0.497 | 1.96 | 0.95975 | 1.00000 | |
| RegionR8 | 0.356 | 1.96 | 0.76779 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.07 | 1.96 | 0.99982 | 1.00000 | |
| RegenerationR2 | -1.375 | 1.96 | 0.07196 | 0.43574 | |
| RegenerationR3 | -0.486 | 1.96 | 0.52558 | 0.86967 | |
| RegenerationR4 | 0.19 | 1.96 | 0.81455 | 0.99113 | |
| RegenerationR5 | 0.056 | 1.96 | 0.89871 | 1.00000 | |
| RegenerationR6 | -1.115 | 1.96 | 0.18041 | 0.51532 | |
| RegenerationBL | 0.41 | 1.96 | 0.74230 | 1.00000 | |
| RegenerationTP | 0.329 | 1.96 | 0.82331 | 1.00000 |
Genes with expression patterns similar to MligTC455_23994
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23994 | 93 | 1.95 | Mlig455_048700 | Neo: - Age: - |
KDM6A | 5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_048700 {REF} {Length: 4708} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=104.2]; WD domain, G-beta repeat [PF00400.34, score=45.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=19.3]} {Human: ENSG00000147050, KDM6A, lysine demethylase 6A, [RH, Score=586, Expect=0.0]; ENSG00000183878, UTY, ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, [RH, Score=577, Expect=0.0]; ENSG00000132510, KDM6B, lysine demethylase 6B, [RH, Score=560, Expect=4e-175]} {Mouse: ENSMUSG00000037369, Kdm6a, lysine (K)-specific demethylase 6A, [RH, Score=589, Expect=0.0]; ENSMUSG00000018476, Kdm6b, KDM1 lysine (K)-specific demethylase 6B, [RH, Score=560, Expect=9e-176]} {Dmel: FBgn0260749, Utx, Utx histone demethylase, [Score=590, Expect=0.0]} {Celegans: WBGene00017046, utx-1, UTX (Ubiquitously transcribed TPR on X) homolog, [RH, Score=422, Expect=9e-129]} {Smed: dd_Smed_v6_5837_0_1, dd_Smed_v6_5837_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_48790} {RNA1310_10269.1} {RNA815_1846} |
| 2. | MligTC455_15471 | 310 | 6.45 | Mlig455_022527 | Neo: Irradiation Age: logFC(26M/2M)=0.502 Region-enriched R5: 3.024/0.00001 |
CHEK1 | 1.793 | - | - | 0.832 | - | - | 0.961 | Mlig455_022527 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=7e-62]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=3e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1310_7988, RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1509_12170, RNA1509_35656, RNA1509_43198, RNA815_13053} |
| 3. | MligTC455_47270 | 139 | 2.9 | Mlig455_057576 | Neo: Irradiation Age: Down-Up-Up |
0.983 | - | - | - | - | - | 0.983 | Mlig455_057576 {REF} {Length: 2184} {RNA1310_33879} {RNA815_33583} | |
| 4. | MligTC455_31734 | 16 | 0.33 | Mlig455_064659 | Neo: - |
0.981 | - | - | - | - | 0.981 | - | Mlig455_064659 {REF} {Length: 5743} {RNA1509_19255} {RNA1310_1785} {RNA815_1942} | |
| 5. | MligTC455_13489 | 99 | 2.06 | Mlig455_052411 | Neo: Irradiation Age: - Region-enriched R5: 2.712/0.02804 |
0.976 | - | - | - | - | - | 0.976 | Mlig455_052411 {REF} {Length: 1290} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=30.9]} {RNA1509_40924} {RNA1310_26717} {RNA815_11954.1} | |
| 6. | MligTC455_33296 | 570 | 11.88 | Mlig455_034979, Mlig455_053705 | Neo: - Age: - |
0.972 | - | - | - | - | - | 0.972 | Mlig455_034979 {REF} {Length: 2544} {RNA1509_22376} {RNA1310_23542, RNA1509_22376} {RNA1509_22376, RNA815_7831} Mlig455_053705 {REF} {Length: 3107} {RNA1509_22376} {RNA1310_23542} {RNA815_7831} |
|
| 7. | MligTC455_32586 | 97 | 2.02 | Mlig455_052753 | Neo: Irradiation Age: - Region-enriched R5: 2.108/0.03498 |
0.97 | - | - | - | - | - | 0.970 | Mlig455_052753 {REF} {Length: 1463} {TRANSSPLICED} {RNA1509_48403} {RNA1310_44079, RNA1509_48403} {RNA1509_48403, RNA815_21852} | |
| 8. | MligTC455_06295 | 178 | 3.7 | Mlig455_007554, Mlig455_011810, Mlig455_013188 | Neo: - Age: logFC(26M/2M)=-0.489 |
RDH12 | 0.968 | - | - | - | - | 0.968 | - | Mlig455_007554 {REF} {Length: 2179} {Pfam: short chain dehydrogenase [PF00106.27, score=73.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=39.9]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=134, Expect=2e-36]; ENSG00000240857, RDH14, retinol dehydrogenase 14, [Score=134, Expect=4e-36]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=138, Expect=9e-38]} {Dmel: FBgn0033205, CG2064, [Score=129, Expect=2e-34]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=101, Expect=2e-24]} {Smed: dd_Smed_v6_11283_0_1, dd_Smed_v6_11283_0_1, [Score=121, Expect=1e-31]} {RNA1310_44802} {RNA815_47495} Mlig455_011810 {REF} {Length: 2033} {Pfam: short chain dehydrogenase [PF00106.27, score=73.4]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=41.5]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=141, Expect=1e-38]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=137, Expect=3e-37]; ENSMUSG00000021123, Rdh12, retinol dehydrogenase 12, [Score=133, Expect=1e-35]} {Dmel: FBgn0029866, CG3842, [Score=134, Expect=2e-35]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=99.8, Expect=1e-23]} {Smed: dd_Smed_v6_11283_0_1, dd_Smed_v6_11283_0_1, [Score=117, Expect=5e-30]} {RNA1310_45617} {RNA815_47495} Mlig455_013188 {REF} {Length: 2164} {Pfam: short chain dehydrogenase [PF00106.27, score=72.3]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=40.9]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=139, Expect=6e-38]} {Mouse: ENSMUSG00000021123, Rdh12, retinol dehydrogenase 12, [Score=137, Expect=3e-37]; ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=135, Expect=2e-36]} {Dmel: FBgn0029866, CG3842, [Score=135, Expect=9e-36]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=100, Expect=5e-24]} {Smed: dd_Smed_v6_2096_0_1, dd_Smed_v6_2096_0_1, [Score=115, Expect=2e-29]} {RNA1310_45617} {RNA815_47495} |
| 9. | MligTC455_51459 | 181 | 3.76 | Mlig455_010077, Mlig455_063246 | Neo: - Age: Down-Up-Up |
0.966 | - | - | - | - | - | 0.966 | Mlig455_010077 {REF} {Length: 657} {Pfam: Tyrosine hydroxylase N terminal [PF12549.10, score=42.7]} {RNA1310_62596} {RNA815_36555} Mlig455_063246 {REF} {Length: 828} {Pfam: Tyrosine hydroxylase N terminal [PF12549.10, score=52.3]; P-loop ATPase protein family [PF03668.17, score=21.6]} {RNA1310_62596} {RNA815_36555} |
|
| 10. | MligTC455_18174 | 383 | 7.98 | Mlig455_064745 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.035/0.02461 |
LMO7 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_064745 {REF} {Length: 5455} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=47.7]; LIM domain [PF00412.24, score=27.8]; CAMSAP CH domain [PF11971.10, score=20.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.2, Expect=8e-19]} {Dmel: FBgn0263346, CG43427, [RH, Score=130, Expect=2e-30]} {Celegans: WBGene00017904, lim-8, LIM domain family, [RH, Score=116, Expect=4e-26]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=80.5, Expect=3e-15]} {RNA1509_28988, RNA1509_58786} {RNA1310_10382, RNA1509_28988, RNA1509_58786} {RNA1509_28988, RNA1509_58786, RNA815_2775.1} |
| 11. | MligTC455_00043 | 14 | 0.29 | Mlig455_053584 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_053584 {REF} {Length: 359} {NoTransDecoderORF} | |
| 12. | MligTC455_41275 | 384 | 8 | Mlig455_060364 | Neo: - Age: - |
RFK | 0.963 | - | - | 0.963 | - | - | - | Mlig455_060364 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: Riboflavin kinase [PF01687.19, score=92.9]} {Human: ENSG00000135002, RFK, riboflavin kinase, [RH, Score=58.9, Expect=9e-11]} {Mouse: ENSMUSG00000024712, Rfk, riboflavin kinase, [RH, Score=59.3, Expect=5e-11]} {RNA1509_26370} {RNA1310_18887, RNA1509_26370} {RNA1509_26370, RNA815_16418} |
| 13. | MligTC455_25343 | 28 | 0.59 | Mlig455_003011 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_003011 {REF} {Length: 3854} {TRANSSPLICED} {Dmel: FBgn0029697, CG15570, [Score=51.6, Expect=2e-06]} {RNA1509_54202} {RNA1310_5109} {RNA815_16616} | |
| 14. | MligTC455_10522 | 86 | 1.8 | Mlig455_047713 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_047713 {REF} {Length: 2067} {RNA1509_36146} {RNA1310_33642} {RNA815_14202} | |
| 15. | MligTC455_47892 | 119 | 2.49 | Mlig455_054967 | Neo: - Age: - Region-enriched R5: 2.180/0.01611 |
WDR37 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_054967 {REF} {Length: 3048} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=77.8]} {Human: ENSG00000047056, WDR37, WD repeat domain 37, [RH, Score=201, Expect=9e-57]} {Mouse: ENSMUSG00000021147, Wdr37, WD repeat domain 37, [RH, Score=204, Expect=5e-58]} {Dmel: FBgn0038617, CG12333, [RH, Score=195, Expect=4e-55]} {Celegans: WBGene00015470, C05D2.10, [RH, Score=173, Expect=3e-47]} {Smed: dd_Smed_v6_3313_0_1, dd_Smed_v6_3313_0_1, [RH, Score=180, Expect=4e-49]} {RNA1509_16552} {RNA1310_18365} {RNA815_26613} |
| 16. | MligTC455_42686 | 383 | 7.98 | Mlig455_023785 | Neo: - Age: Up-Up-Down |
PIGZ | 0.957 | - | - | 0.957 | - | - | - | Mlig455_023785 {REF} {Length: 2574} {TRANSSPLICED} {Pfam: Alg9-like mannosyltransferase family [PF03901.19, score=91.7]} {Human: ENSG00000119227, PIGZ, phosphatidylinositol glycan anchor biosynthesis class Z, [Score=61.6, Expect=1e-09]} {Dmel: FBgn0266438, PIG-Z, Phosphatidylinositol glycan anchor biosynthesis class Z, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_14430_0_2, dd_Smed_v6_14430_0_2, [Score=67.0, Expect=5e-12]} {RNA1509_51308} {RNA1310_14478} {RNA815_7374} |
| 17. | MligTC455_52921 | 903 | 18.8 | Mlig455_039568, Mlig455_051378 | Neo: - Age: - |
MLH3 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_039568 {REF} {Length: 890} {TRANSSPLICED} {Human: ENSG00000119684, MLH3, mutL homolog 3, [RH, Score=50.4, Expect=3e-07]} {Mouse: ENSMUSG00000021245, Mlh3, mutL homolog 3, [Score=47.8, Expect=2e-06]} {Smed: dd_Smed_v6_25712_0_1, dd_Smed_v6_25712_0_1, [RH, Score=58.2, Expect=4e-11]} {RNA1509_20519} {RNA1310_40805, RNA1509_20519} {RNA1509_20519, RNA815_19876} Mlig455_051378 {REF} {Length: 879} {TRANSSPLICED} {Human: ENSG00000119684, MLH3, mutL homolog 3, [RH, Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000021245, Mlh3, mutL homolog 3, [Score=47.8, Expect=3e-06]} {Smed: dd_Smed_v6_25712_0_1, dd_Smed_v6_25712_0_1, [RH, Score=58.2, Expect=7e-11]} {RNA1509_20519} {RNA1310_40805} {RNA815_19876} |
| 18. | MligTC455_12872 | 149 | 3.1 | Mlig455_057561 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 1.624/0.04283 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_057561 {REF} {Length: 1130} {RNA1509_29400} {RNA1310_15529} {RNA815_14251} | |
| 19. | MligTC455_14260 | 24 | 0.49 | Mlig455_057199 | Neo: Irradiation Age: logFC(26M/2M)=0.576 |
RARB | 0.953 | - | - | - | - | - | 0.953 | Mlig455_057199 {REF} {Length: 3614} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=107.2]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=49.7]} {Human: ENSG00000077092, RARB, retinoic acid receptor beta, [RH, Score=223, Expect=6e-67]; ENSG00000131759, RARA, retinoic acid receptor alpha, [RH, Score=219, Expect=3e-65]; ENSG00000172819, RARG, retinoic acid receptor gamma, [RH, Score=218, Expect=1e-65]} {Mouse: ENSMUSG00000017491, Rarb, retinoic acid receptor, beta, [RH, Score=222, Expect=7e-67]; ENSMUSG00000001288, Rarg, retinoic acid receptor, gamma, [RH, Score=218, Expect=3e-65]; ENSMUSG00000037992, Rara, retinoic acid receptor, alpha, [RH, Score=217, Expect=1e-64]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [RH, Score=147, Expect=3e-37]} {Celegans: WBGene00004786, sex-1, Steroid hormone receptor family member cnr14, [Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [RH, Score=142, Expect=5e-37]} {RNA1310_25263} {RNA815_35184} |
| 20. | MligTC455_27141 | 22 | 0.46 | Mlig455_010519 | Neo: - Age: logFC(26M/2M)=-0.986 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_010519 {REF} {Length: 466} {NoTransDecoderORF} {RNA1509_22571} {RNA1310_15760} {RNA815_80.1} |
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