Data search
Results for MligTC455_17621
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17621 | 97 | 2.02 | Mlig455_042086 | Neo: Int S/G2/M Age: Up-Up-Down |
Mlig455_042086 {REF} {Length: 2172} {NoTransDecoderORF} {RNA1509_18737} {RNA1310_4779.2, RNA1509_18737} {RNA1509_18737, RNA815_11780} |
Cumulative graph for MligTC455_17621
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.19 | 1.712 | 0.54690 | 1.00000 | |
| RegionR2 | -0.292 | 1.712 | 0.79797 | 1.00000 | |
| RegionR3 | -2.404 | 1.712 | 0.02098 | 0.24362 | |
| RegionR4 | 1.117 | 1.712 | 0.19485 | 0.47257 | |
| RegionR5 | 0.082 | 1.712 | 0.89334 | 1.00000 | |
| RegionR6 | -1.364 | 1.712 | 0.17058 | 0.72756 | |
| RegionR7 | 0.692 | 1.712 | 0.49031 | 1.00000 | |
| RegionR8 | 0.98 | 1.712 | 0.41905 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.804 | 1.712 | 0.28482 | 0.98374 | |
| RegenerationR2 | 0.014 | 1.712 | 0.99297 | 1.00000 | |
| RegenerationR3 | 1.151 | 1.712 | 0.31970 | 0.74809 | |
| RegenerationR4 | -1.77 | 1.712 | 0.04925 | 0.35782 | |
| RegenerationR5 | -0.951 | 1.712 | 0.27464 | 0.70442 | |
| RegenerationR6 | 0.865 | 1.712 | 0.43292 | 0.75955 | |
| RegenerationBL | -0.628 | 1.712 | 0.61806 | 0.96135 | |
| RegenerationTP | -2.363 | 1.712 | 0.10630 | 0.50466 |
Genes with expression patterns similar to MligTC455_17621
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17621 | 97 | 2.02 | Mlig455_042086 | Neo: Int S/G2/M Age: Up-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042086 {REF} {Length: 2172} {NoTransDecoderORF} {RNA1509_18737} {RNA1310_4779.2, RNA1509_18737} {RNA1509_18737, RNA815_11780} | |
| 2. | MligTC455_42692 | 297 | 6.2 | Mlig455_027473 | Neo: Irradiation Age: Up-Down-Down |
GCFC2 | 1.775 | - | - | - | 0.980 | - | 0.795 | Mlig455_027473 {REF} {Length: 3517} {TRANSSPLICED} {Pfam: GC-rich sequence DNA-binding factor-like protein [PF07842.14, score=37.9]} {Human: ENSG00000005436, GCFC2, GC-rich sequence DNA-binding factor 2, [RH, Score=178, Expect=5e-46]} {Mouse: ENSMUSG00000035125, Gcfc2, GC-rich sequence DNA binding factor 2, [RH, Score=172, Expect=3e-44]; ENSMUSG00000022974, Paxbp1, PAX3 and PAX7 binding protein 1, [RH, Score=168, Expect=1e-42]} {Dmel: FBgn0037466, CG1965, [RH, Score=154, Expect=2e-38]} {Celegans: WBGene00009672, F43G9.12, [RH, Score=125, Expect=4e-29]} {Smed: dd_Smed_v6_11179_0_1, dd_Smed_v6_11179_0_1, [RH, Score=202, Expect=1e-54]} {RNA1509_16602, RNA1509_20486, RNA1509_28455} {RNA1310_5802.1, RNA1509_16602, RNA1509_20486, RNA1509_28455} {RNA1509_16602, RNA1509_20486, RNA1509_28455, RNA815_7547} |
| 3. | MligTC455_10850 | 44 | 0.91 | Mlig455_015903 | Neo: - Age: - |
SLC47A1 | 1.765 | - | 0.956 | - | - | - | 0.809 | Mlig455_015903 {REF} {Length: 3108} {Pfam: MatE [PF01554.20, score=163.9]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=296, Expect=2e-92]} {Mouse: ENSMUSG00000010122, Slc47a1, solute carrier family 47, member 1, [RH, Score=319, Expect=3e-101]; ENSMUSG00000069855, Slc47a2, solute carrier family 47, member 2, [RH, Score=311, Expect=2e-98]} {Smed: dd_Smed_v6_11376_0_1, dd_Smed_v6_11376_0_1, [Score=392, Expect=6e-130]} {RNA1509_41969} {RNA1310_11520} {RNA815_9412} |
| 4. | MligTC455_37996 | 140 | 2.92 | Mlig455_023092, Mlig455_038319 | Neo: - Age: - |
PRR9 | 0.975 | - | - | - | 0.975 | - | - | Mlig455_023092 {REF} {Length: 1376} {Pfam: Cysteine rich repeat [PF02363.21, score=26.5]} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=5e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=67.8, Expect=1e-13]} {RNA1310_7390.1} {RNA815_26670} Mlig455_038319 {REF} {Length: 5692} {Smed: dd_Smed_v6_18585_0_1, dd_Smed_v6_18585_0_1, [Score=105, Expect=2e-25]} {RNA1310_17667} {RNA815_26670} |
| 5. | MligTC455_43880 | 107 | 2.24 | Mlig455_034314 | Neo: - |
MFSD11 | 0.964 | - | 0.964 | - | - | - | - | Mlig455_034314 {REF} {Length: 3517} {Pfam: Ion channel regulatory protein UNC-93 [PF05978.18, score=154.5]} {Human: ENSG00000092931, MFSD11, major facilitator superfamily domain containing 11, [Score=247, Expect=2e-77]} {Mouse: ENSMUSG00000020818, Mfsd11, major facilitator superfamily domain containing 11, [Score=247, Expect=1e-77]} {Dmel: FBgn0038053, CG18549, [Score=198, Expect=5e-59]} {Celegans: WBGene00017945, F31D5.2, [Score=152, Expect=8e-42]} {Smed: dd_Smed_v6_6305_0_1, dd_Smed_v6_6305_0_1, [Score=206, Expect=4e-62]} {RNA1509_23938} {RNA1310_10975.1} {RNA815_5713} |
| 6. | MligTC455_23900 | 790 | 16.46 | Mlig455_046112 | Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=-0.380 Region-enriched R5: 1.370/0.00184 Regeneration-upregulated R6: 2.045 Regeneration-enriched R6: 2.045 |
0.963 | - | 0.963 | - | - | - | - | Mlig455_046112 {REF} {Length: 1282} {TRANSSPLICED} {RNA1509_15796, RNA1509_44444, RNA1509_53057} {RNA1310_22553.1, RNA1509_44444, RNA1509_53057} {RNA1509_44444, RNA1509_53057, RNA815_21620} | |
| 7. | MligTC455_24191 | 167 | 3.47 | Mlig455_036990 | Neo: - Age: logFC(26M/2M)=0.434 Region-enriched R5: 2.098/0.03929 |
GCKR | 0.962 | - | 0.962 | - | - | - | - | Mlig455_036990 {REF} {Length: 3658} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=29.6]} {Human: ENSG00000084734, GCKR, glucokinase regulator, [RH, Score=150, Expect=6e-37]} {Mouse: ENSMUSG00000059434, Gckr, glucokinase regulatory protein, [RH, Score=146, Expect=7e-36]} {Dmel: FBgn0259789, zld, zelda, [Score=54.7, Expect=6e-07]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_5558_0_1, dd_Smed_v6_5558_0_1, [RH, Score=75.5, Expect=3e-14]} {RNA1509_51386} {RNA1310_15402} {RNA815_4323.1} |
| 8. | MligTC455_30301 | 831 | 17.3 | Mlig455_007156 | Neo: Neoblast, stringent Age: Up-Down-Down |
SMC4 | 0.962 | - | 0.962 | - | - | - | - | Mlig455_007156 {REF} {Length: 5128} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=234.4]; SMC proteins Flexible Hinge Domain [PF06470.15, score=84.9]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=52.2]; AAA ATPase domain [PF13175.8, score=29.6]; AAA domain [PF13476.8, score=22.0]; P-loop containing region of AAA domain [PF13555.8, score=21.6]} {Human: ENSG00000113810, SMC4, structural maintenance of chromosomes 4, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000034349, Smc4, structural maintenance of chromosomes 4, [RH, Score=670, Expect=0.0]} {Dmel: FBgn0015391, glu, gluon, [RH, Score=533, Expect=6e-164]} {Celegans: WBGene00004874, smc-4, Structural maintenance of chromosomes protein 4, [RH, Score=348, Expect=4e-98]} {Smed: dd_Smed_v6_5865_0_4, dd_Smed_v6_5865_0_4, [RH, Score=544, Expect=3e-169]} {RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936} {RNA1310_1138.1, RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936} {RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936, RNA815_2120} |
| 9. | MligTC455_13937 | 387 | 8.07 | Mlig455_028006, Mlig455_028036 | Neo: Irradiation Age: - Region-enriched R5: 2.460/0.00025 |
CDC6 | 0.961 | - | - | 0.961 | - | - | - | Mlig455_028006 {REF} {Length: 2767} {TRANSSPLICED} {Pfam: CDC6, C terminal winged helix domain [PF09079.13, score=33.5]; AAA domain [PF13401.8, score=28.9]; AAA ATPase domain [PF13191.8, score=26.6]; AAA lid domain [PF17872.3, score=21.5]; AAA domain [PF13245.8, score=21.4]; Type II/IV secretion system protein [PF00437.22, score=19.3]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=115, Expect=6e-27]} {Dmel: FBgn0035918, Cdc6, [Score=93.6, Expect=5e-20]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=92.4, Expect=5e-20]} {RNA1509_55655} {RNA1310_35548} {RNA815_7333.1} Mlig455_028036 {REF} {Length: 3756} {TRANSSPLICED} {Pfam: AAA domain [PF13401.8, score=42.2]; AAA ATPase domain [PF13191.8, score=37.7]; CDC6, C terminal winged helix domain [PF09079.13, score=33.9]; AAA domain [PF13245.8, score=27.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=24.5]; AAA lid domain [PF17872.3, score=21.2]; NACHT domain [PF05729.14, score=20.3]; Type II/IV secretion system protein [PF00437.22, score=18.2]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=132, Expect=2e-32]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=138, Expect=1e-34]} {Dmel: FBgn0035918, Cdc6, [Score=116, Expect=2e-27]} {Celegans: WBGene00000382, cdc-6, Cell Division Cycle related, [Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=116, Expect=5e-28]} {RNA1509_16975, RNA1509_55655} {RNA1310_16898.1, RNA1509_16975, RNA1509_55655} {RNA1509_16975, RNA1509_55655, RNA815_7333.1} |
| 10. | MligTC455_23539 | 192 | 4.01 | Mlig455_006209, Mlig455_052008, Mlig455_057228 | Neo: - Age: - |
0.961 | - | 0.961 | - | - | - | - | Mlig455_006209 {REF} {Length: 1716} {TRANSSPLICED} {Pfam: Ribosomal protein L1p/L10e family [PF00687.23, score=28.9]} {Dmel: FBgn0037566, mRpL1, mitochondrial ribosomal protein L1, [RH, Score=88.6, Expect=2e-19]} {Smed: dd_Smed_v6_5575_0_1, dd_Smed_v6_5575_0_1, [RH, Score=121, Expect=2e-31]} {RNA1509_23354, RNA1509_39377} {RNA1310_28497.1, RNA1509_23354, RNA1509_39377} {RNA1509_23354, RNA1509_39377, RNA815_12307.1} Mlig455_052008 {REF} {Length: 563} {Smed: dd_Smed_v6_5575_0_1, dd_Smed_v6_5575_0_1, [Score=42.4, Expect=1e-05]} {RNA1509_39377} {RNA1310_28497.2} {RNA815_12307.1} Mlig455_057228 {REF} {Length: 560} {Smed: dd_Smed_v6_5575_0_1, dd_Smed_v6_5575_0_1, [Score=45.1, Expect=2e-06]} {RNA1509_39377} {RNA1310_28497.2} {RNA815_12307.1} |
|
| 11. | MligTC455_10264 | 81 | 1.68 | Mlig455_059867 | Neo: - Age: - |
FLOT2 | 0.959 | - | 0.959 | - | - | - | - | Mlig455_059867 {REF} {Length: 9782} {Pfam: Peptidase family M28 [PF04389.19, score=71.8]; SPFH domain / Band 7 family [PF01145.27, score=69.7]; Transferrin receptor-like dimerisation domain [PF04253.17, score=39.8]; Low-density lipoprotein receptor domain class A [PF00057.20, score=38.7]; PA domain [PF02225.24, score=36.8]; Coagulation Factor Xa inhibitory site [PF14670.8, score=32.2]; Flotillin [PF15975.7, score=29.4]} {Human: ENSG00000132589, FLOT2, flotillin 2, [RH, Score=565, Expect=0.0]} {Mouse: ENSMUSG00000061981, Flot2, flotillin 2, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0264078, Flo2, Flotillin 2, [Score=561, Expect=3e-180]} {Celegans: WBGene00020082, gcp-2.1, Glutamate carboxypeptidase 2 homolog, [RH, Score=283, Expect=3e-80]} {Smed: dd_Smed_v6_6436_0_1, dd_Smed_v6_6436_0_1, [RH, Score=567, Expect=0.0]} {RNA1509_7864} {RNA1310_545} {RNA815_1855} |
| 12. | MligTC455_44357 | 499 | 10.4 | Mlig455_026004 | Neo: Germline Age: - Region-enriched R4: 2.644/0.00002 |
0.959 | - | 0.959 | - | - | - | - | Mlig455_026004 {REF} {Length: 1484} {TRANSSPLICED} {RNA1509_8535} {RNA1310_21622, RNA1509_8535} {RNA1509_8535, RNA815_8801} | |
| 13. | MligTC455_32517 | 153 | 3.19 | Mlig455_064987 | Neo: - Age: Up-Down-Up |
OTUD7B | 0.958 | - | 0.958 | - | - | - | - | Mlig455_064987 {REF} {Length: 3738} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=67.6]; A20-like zinc finger [PF01754.18, score=22.3]} {Human: ENSG00000264522, OTUD7B, OTU deubiquitinase 7B, [RH, Score=251, Expect=6e-72]} {Mouse: ENSMUSG00000038495, Otud7b, OTU domain containing 7B, [RH, Score=251, Expect=5e-72]; ENSMUSG00000033510, Otud7a, OTU domain containing 7A, [RH, Score=247, Expect=1e-71]} {Dmel: FBgn0037734, trbd, trabid, [Score=125, Expect=3e-29]} {Celegans: WBGene00021733, otub-2, OTUBain deubiquitylating protease homolog, [RH, Score=238, Expect=4e-69]} {Smed: dd_Smed_v6_10637_0_1, dd_Smed_v6_10637_0_1, [Score=246, Expect=3e-73]} {RNA1509_13944} {RNA1310_14040.1} {RNA815_8064} |
| 14. | MligTC455_35820 | 87 | 1.81 | Mlig455_017434 | Neo: - Age: - |
0.957 | - | 0.957 | - | - | - | - | Mlig455_017434 {REF} {Length: 1476} {TRANSSPLICED} {RNA1310_42117} {RNA815_18951.1} | |
| 15. | MligTC455_11809 | 21 | 0.43 | Mlig455_006477 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_006477 {REF} {Length: 1357} {NoTransDecoderORF} {RNA1310_137644} | |
| 16. | MligTC455_20774 | 113 | 2.35 | Mlig455_012156 | Neo: - Age: - |
0.952 | - | 0.952 | - | - | - | - | Mlig455_012156 {REF} {Length: 761} {NoTransDecoderORF} {RNA1509_42853} {RNA1310_68757} {RNA815_28684.2} | |
| 17. | MligTC455_07424 | 29 | 0.6 | Mlig455_052614 | Neo: - Age: - |
0.951 | - | 0.951 | - | - | - | - | Mlig455_052614 {REF} {Length: 721} {RNA1310_31171} | |
| 18. | MligTC455_32967 | 576 | 12.01 | Mlig455_029997 | Neo: - Age: - |
PACS2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_029997 {REF} {Length: 4757} {Pfam: PACS-1 cytosolic sorting protein [PF10254.11, score=257.1]} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [Score=150, Expect=1e-36]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=142, Expect=2e-34]; ENSMUSG00000024855, Pacs1, phosphofurin acidic cluster sorting protein 1, [Score=141, Expect=6e-34]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [Score=94.4, Expect=2e-19]} {Celegans: WBGene00044077, tag-232, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [Score=120, Expect=1e-27]} {RNA1509_8323} {RNA1310_2019} {RNA815_5381.1} |
| 19. | MligTC455_13455 | 107 | 2.24 | Mlig455_048184 | Neo: - Age: - Region-enriched R2: 5.623/0.00020 |
ACSS2 | 0.95 | - | 0.950 | - | - | - | - | Mlig455_048184 {REF} {Length: 3531} {Pfam: AMP-binding enzyme [PF00501.30, score=292.3]; AMP-binding enzyme C-terminal domain [PF13193.8, score=82.0]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=49.1]} {Human: ENSG00000131069, ACSS2, acyl-CoA synthetase short chain family member 2, [Score=632, Expect=0.0]} {Mouse: ENSMUSG00000027605, Acss2, acyl-CoA synthetase short-chain family member 2, [Score=627, Expect=0.0]} {Dmel: FBgn0012034, AcCoAS, Acetyl Coenzyme A synthase, [Score=668, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=585, Expect=0.0]} {Smed: dd_Smed_v6_1817_0_1, dd_Smed_v6_1817_0_1, [Score=642, Expect=0.0]} {RNA1310_58555} {RNA815_29982} |
| 20. | MligTC455_20240 | 99 | 2.06 | Mlig455_001024, Mlig455_065675 | Neo: - Age: Down-Up-Up |
0.95 | - | - | - | - | 0.950 | - | Mlig455_001024 {REF} {Length: 2056} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=62.4, Expect=7e-13]} {RNA1509_7841} {RNA1310_18810} {RNA815_19156} Mlig455_065675 {REF} {Length: 2049} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=72.4, Expect=5e-15]} {RNA1509_7841} {RNA1310_18810} {RNA815_19156} |
|
| 21. | MligTC455_45071 | 772 | 16.09 | Mlig455_021825 | Neo: - Age: - Region-enriched R2: 1.462/0.04952 |
WDR13 | 0.95 | - | 0.950 | - | - | - | - | Mlig455_021825 {REF} {Length: 1950} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=51.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.7]} {Human: ENSG00000101940, WDR13, WD repeat domain 13, [RH, Score=379, Expect=4e-126]} {Mouse: ENSMUSG00000031166, Wdr13, WD repeat domain 13, [RH, Score=372, Expect=2e-123]} {Dmel: FBgn0040066, wds, will die slowly, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_5274_0_1, dd_Smed_v6_5274_0_1, [RH, Score=295, Expect=7e-94]} {RNA1509_13245} {RNA1310_11415.1, RNA1509_13245} {RNA1509_13245, RNA815_3970} |
| 22. | MligTC455_51040 | 147 | 3.06 | Mlig455_008235 | Neo: - Age: - |
POLN | 0.95 | - | 0.950 | - | - | - | - | Mlig455_008235 {REF} {Length: 3176} {TRANSSPLICED} {Pfam: DNA polymerase family A [PF00476.22, score=284.2]} {Human: ENSG00000130997, POLN, DNA polymerase nu, [RH, Score=233, Expect=6e-64]} {Mouse: ENSMUSG00000045102, Poln, DNA polymerase N, [RH, Score=226, Expect=5e-62]} {Dmel: FBgn0002905, mus308, mutagen-sensitive 308, [Score=139, Expect=3e-33]} {Celegans: WBGene00020964, polq-1, DNA polymerase theta, [Score=159, Expect=1e-39]} {Smed: dd_Smed_v6_20320_0_1, dd_Smed_v6_20320_0_1, [Score=155, Expect=2e-39]} {RNA1509_41749} {RNA1310_31032} {RNA815_48580} |
Berezikov Lab - 2020-2021 © ERIBA