M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_18403

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18403 11 0.24 Mlig455_059039

Neo: -

Age: -

 Mlig455_059039 {REF} {Length: 1516} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_56484.1} {RNA815_14295}

Cumulative graph for MligTC455_18403

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_18403

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18403 11 0.24 Mlig455_059039

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_059039 {REF} {Length: 1516} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_56484.1} {RNA815_14295}
2. MligTC455_45735 175 3.64 Mlig455_013937, Mlig455_039355

Neo: -

Age: Up-Down-Down

 0.985 - - - - 0.985 -

Mlig455_013937 {REF} {Length: 1369} {RNA1310_48389} {RNA815_22666}

Mlig455_039355 {REF} {Length: 1299} {RNA1310_48389} {RNA815_22666}
3. MligTC455_19758 53 1.1 Mlig455_002464

Neo: -

Age: -

Region-enriched R2: 6.578/0.02863

 0.984 - - - - 0.984 - Mlig455_002464 {REF} {Length: 2549} {RNA1310_38437} {RNA815_40458}
4. MligTC455_49663 245 5.1 Mlig455_013565

Neo: -

Age: -

 CDH23 0.981 - - - - 0.981 - Mlig455_013565 {REF} {Length: 7289} {Pfam: Cadherin domain [PF00028.19, score=361.2]; Cadherin-like [PF08266.14, score=38.9]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=372, Expect=1e-103]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=375, Expect=6e-105]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [Score=362, Expect=2e-101]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=224, Expect=2e-58]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=414, Expect=3e-118]} {RNA1509_16482} {RNA1310_682} {RNA815_249}
5. MligTC455_38682 102 2.12 Mlig455_039641

Neo: -

Age: -

Region-enriched R2: 6.138/0.02363

 SLC18A3 0.98 - - - - 0.980 - Mlig455_039641 {REF} {Length: 3925} {Pfam: Major Facilitator Superfamily [PF07690.18, score=147.1]; Sugar (and other) transporter [PF00083.26, score=29.0]; LacY proton/sugar symporter [PF01306.21, score=20.2]} {Human: ENSG00000187714, SLC18A3, solute carrier family 18 member A3, [RH, Score=469, Expect=9e-161]} {Mouse: ENSMUSG00000100241, Slc18a3, solute carrier family 18 (vesicular monoamine), member 3, [RH, Score=469, Expect=1e-160]} {Dmel: FBgn0270928, VAChT, Vesicular acetylcholine transporter, [RH, Score=513, Expect=2e-177]} {Celegans: WBGene00006756, unc-17, Vesicular acetylcholine transporter unc-17, [RH, Score=486, Expect=2e-167]} {Smed: dd_Smed_v6_11630_0_1, dd_Smed_v6_11630_0_1, [RH, Score=563, Expect=0.0]} {RNA1310_28397} {RNA815_32284.1}
6. MligTC455_52120 179 3.73 Mlig455_024423, Mlig455_024577

Neo: -

Age: Down-Up-Down

Region-enriched R2: 4.068/0.01755

 POU4F3 0.98 - - - - 0.980 -

Mlig455_024423 {REF} {Length: 1288} {TRANSSPLICED} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=104.8]; Homeodomain [PF00046.31, score=60.9]} {Human: ENSG00000091010, POU4F3, POU class 4 homeobox 3, [Score=212, Expect=1e-65]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [Score=212, Expect=7e-66]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [Score=211, Expect=2e-64]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [Score=209, Expect=2e-64]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [Score=188, Expect=4e-57]} {Smed: dd_Smed_v6_30562_0_1, dd_Smed_v6_30562_0_1, [Score=208, Expect=2e-64]} {RNA1509_57422} {RNA1310_23131} {RNA815_34447}

Mlig455_024577 {REF} {Length: 1325} {TRANSSPLICED} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=104.8]; Homeodomain [PF00046.31, score=60.9]} {Human: ENSG00000091010, POU4F3, POU class 4 homeobox 3, [Score=212, Expect=1e-65]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [Score=212, Expect=7e-66]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [Score=211, Expect=2e-64]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [Score=209, Expect=2e-64]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [Score=188, Expect=4e-57]} {Smed: dd_Smed_v6_30562_0_1, dd_Smed_v6_30562_0_1, [Score=208, Expect=2e-64]} {RNA1509_57422} {RNA1310_23131} {RNA815_34447}
7. MligTC455_43667 251 5.24 Mlig455_070631

Neo: -

Age: Down-Down-Up

 KY 0.979 - - - - 0.979 - Mlig455_070631 {REF} {Length: 5010} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=114, Expect=3e-25]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=114, Expect=3e-25]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=151, Expect=4e-37]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=139, Expect=2e-34]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=136, Expect=4e-32]} {RNA1509_26818, RNA1509_52206, RNA1509_7582} {RNA1310_2203, RNA1509_26818, RNA1509_52206, RNA1509_7582} {RNA1509_26818, RNA1509_52206, RNA1509_7582, RNA815_6135}
8. MligTC455_46429 48 1 Mlig455_042128

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_042128 {REF} {Length: 1428} {Pfam: F5/8 type C domain [PF00754.27, score=33.1]} {RNA1310_65361} {RNA815_33677}
9. MligTC455_52092 37 0.76 Mlig455_025474

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_025474 {REF} {Length: 901} {Pfam: Pancreatic hormone peptide [PF00159.20, score=19.5]} {RNA1509_56567} {RNA1310_46347} {RNA815_35686}
10. MligTC455_46138 27 0.56 Mlig455_055364

Neo: -

Age: -

 PRKCZ 0.974 - - - - 0.974 - Mlig455_055364 {REF} {Length: 2384} {TRANSSPLICED} {Pfam: PB1 domain [PF00564.26, score=24.5]} {Human: ENSG00000067606, PRKCZ, protein kinase C zeta, [Score=75.5, Expect=1e-14]} {Mouse: ENSMUSG00000029053, Prkcz, protein kinase C, zeta, [Score=77.4, Expect=2e-15]} {Smed: dd_Smed_v6_2110_0_2, dd_Smed_v6_2110_0_2, [Score=71.6, Expect=6e-14]} {RNA1509_53390} {RNA1310_63144} {RNA815_4312}
11. MligTC455_53190 105 2.18 Mlig455_013516

Neo: -

Age: -

 SCNN1B 0.97 - - - - 0.970 - Mlig455_013516 {REF} {Length: 2819} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=290.8]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=158, Expect=8e-41]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=149, Expect=1e-37]} {Dmel: FBgn0051105, ppk22, pickpocket 22, [RH, Score=60.1, Expect=3e-09]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [RH, Score=166, Expect=2e-43]} {Smed: dd_Smed_v6_17021_0_1, dd_Smed_v6_17021_0_1, [RH, Score=186, Expect=1e-51]} {RNA1509_18670} {RNA1310_20526} {RNA815_9932}
12. MligTC455_46341 243 5.06 Mlig455_052880, Mlig455_052884

Neo: -

Age: -

 0.968 - - - - 0.968 -

Mlig455_052880 {REF} {Length: 1228} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=28.6]; Dpy-30 motif [PF05186.15, score=22.0]; Ankyrin repeats (many copies) [PF13637.8, score=20.9]} {Smed: dd_Smed_v6_29956_0_1, dd_Smed_v6_29956_0_1, [Score=60.5, Expect=6e-10]} {RNA1509_39973} {RNA1310_21889} {RNA815_13094}

Mlig455_052884 {REF} {Length: 1926} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=39.4]; Ankyrin repeats (many copies) [PF13637.8, score=27.7]; Ankyrin repeats (many copies) [PF13857.8, score=24.6]; Dpy-30 motif [PF05186.15, score=21.6]} {Smed: dd_Smed_v6_29956_0_1, dd_Smed_v6_29956_0_1, [Score=72.8, Expect=1e-13]} {RNA1509_39973} {RNA1310_21889, RNA1509_39973} {RNA1509_39973, RNA815_13094}
13. MligTC455_29933 52 1.07 Mlig455_013906, Mlig455_014143, Mlig455_018478, Mlig455_045918, Mlig455_063589, Mlig455_065792, Mlig455_065808

Neo: -

Age: -

 0.966 - - - - 0.966 -

Mlig455_013906 {REF} {Length: 212} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=167.8]; Protein of unknown function (DUF1759) [PF03564.17, score=125.1]; Putative peptidase (DUF1758) [PF05585.14, score=64.6]; Family of unknown function (DUF5641) [PF18701.3, score=56.1]; Integrase zinc binding domain [PF17921.3, score=32.2]; Integrase core domain [PF00665.28, score=30.1]; Aspartyl protease [PF13650.8, score=24.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.9]} {Celegans: WBGene00044435, Y20F4.8, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_42915_0_1, dd_Smed_v6_42915_0_1, [Score=71.6, Expect=2e-14]} {RNA1509_44157} {RNA1310_373} {RNA815_29976}

Mlig455_014143 {REF} {Length: 4270} {TRANSSPLICED} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=167.9]; Protein of unknown function (DUF1759) [PF03564.17, score=124.9]; Family of unknown function (DUF5641) [PF18701.3, score=35.5]} {RNA1509_44157} {RNA1310_373} {RNA815_20029}

Mlig455_018478 {REF} {Length: 6761} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=167.6]; Protein of unknown function (DUF1759) [PF03564.17, score=124.9]; Putative peptidase (DUF1758) [PF05585.14, score=64.4]; Family of unknown function (DUF5641) [PF18701.3, score=55.8]; Integrase core domain [PF00665.28, score=30.1]; Aspartyl protease [PF13650.8, score=24.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.7]} {Celegans: WBGene00044435, Y20F4.8, [Score=50.1, Expect=1e-05]} {Smed: dd_Smed_v6_42915_0_1, dd_Smed_v6_42915_0_1, [Score=72.0, Expect=2e-14]} {RNA1509_44157} {RNA1310_373} {RNA815_20029}

Mlig455_045918 {REF} {Length: 6608} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=157.8]; Putative peptidase (DUF1758) [PF05585.14, score=65.5]; Integrase zinc binding domain [PF17921.3, score=30.6]; Aspartyl protease [PF13650.8, score=24.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.8]; Integrase core domain [PF00665.28, score=24.3]} {Smed: dd_Smed_v6_34182_0_1, dd_Smed_v6_34182_0_1, [Score=52.4, Expect=5e-08]} {RNA1509_44157} {RNA1310_166} {RNA815_20029}

Mlig455_063589 {REF} {Length: 5337} {TRANSSPLICED} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=168.4]; Protein of unknown function (DUF1759) [PF03564.17, score=125.5]; Putative peptidase (DUF1758) [PF05585.14, score=65.1]; Aspartyl protease [PF13650.8, score=24.9]} {RNA1509_44157} {RNA1310_373} {RNA815_20029}

Mlig455_065792 {REF} {Length: 4347} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=60.7]} {RNA1509_44157} {RNA1310_373} {RNA815_29976}

Mlig455_065808 {REF} {Length: 5075} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=157.9]; Protein of unknown function (DUF1759) [PF03564.17, score=124.8]; Putative peptidase (DUF1758) [PF05585.14, score=60.7]; Integrase core domain [PF00665.28, score=30.7]; Aspartyl protease [PF13650.8, score=24.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.1]; Family of unknown function (DUF5641) [PF18701.3, score=21.9]} {Smed: dd_Smed_v6_42915_0_1, dd_Smed_v6_42915_0_1, [Score=68.2, Expect=3e-13]} {RNA1509_44157} {RNA1310_373} {RNA815_25647}
14. MligTC455_32003 65 1.35 Mlig455_033440

Neo: -

Age: Up-Down-Down

 C20orf27 0.963 - - - - 0.963 - Mlig455_033440 {REF} {Length: 4177} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4517) [PF15006.8, score=120.4]} {Human: ENSG00000101220, C20orf27, chromosome 20 open reading frame 27, [Score=61.2, Expect=2e-11]} {Mouse: ENSMUSG00000027327, 1700037H04Rik, RIKEN cDNA 1700037H04 gene, [Score=62.4, Expect=5e-12]} {Dmel: FBgn0035896, CG6983, [Score=74.3, Expect=1e-16]} {RNA1310_43134} {RNA815_7013}
15. MligTC455_16233 307 6.4 Mlig455_011368

Neo: -

Age: logFC(26M/2M)=-1.958

 0.962 - - - - 0.962 - Mlig455_011368 {REF} {Length: 1236} {RNA1509_44264} {RNA1310_62516} {RNA815_23574}
16. MligTC455_42170 342 7.12 Mlig455_038315

Neo: -

Age: Down-Up-Up

 0.962 - - - - 0.962 - Mlig455_038315 {REF} {Length: 2851} {Pfam: Innexin [PF00876.20, score=296.2]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=95.5, Expect=5e-21]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=208, Expect=6e-62]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=276, Expect=2e-87]} {RNA1509_10527, RNA1509_45409} {RNA1310_14408, RNA1509_10527, RNA1509_45409} {RNA1509_10527, RNA1509_45409, RNA815_844.2}
17. MligTC455_43963 1010 21.04 Mlig455_015437

Neo: -

Age: Down-Down-Up

Region-enriched R2: 2.083/0.01168

 0.962 - - - - 0.962 - Mlig455_015437 {REF} {Length: 612} {RNA1509_32160} {RNA1310_60746, RNA1509_32160} {RNA1509_32160, RNA815_30740}
18. MligTC455_46625 361 7.52 Mlig455_031223

Neo: -

Age: logFC(26M/2M)=-0.400

 TTLL8 0.962 - - - - 0.962 - Mlig455_031223 {REF} {Length: 2848} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=242.8]} {Human: ENSG00000138892, TTLL8, tubulin tyrosine ligase like 8, [RH, Score=456, Expect=5e-148]; ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [RH, Score=449, Expect=1e-149]} {Mouse: ENSMUSG00000022388, Ttll8, tubulin tyrosine ligase-like family, member 8, [RH, Score=476, Expect=3e-156]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [RH, Score=370, Expect=2e-114]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=107, Expect=1e-24]} {Smed: dd_Smed_v6_10244_0_2, dd_Smed_v6_10244_0_2, [Score=533, Expect=8e-177]} {RNA1509_44299} {RNA1310_8425} {RNA815_14216}
19. MligTC455_33131 549 11.45 Mlig455_022594, Mlig455_026005, Mlig455_070429

Neo: Germline

Age: logFC(26M/2M)=-0.432

 KY 0.961 - - - - 0.961 -

Mlig455_022594 {REF} {Length: 667} {Pfam: Helix-turn-helix domain of transposase family ISL3 [PF13542.8, score=27.8]} {RNA1509_53064} {RNA1310_18119} {RNA815_4493}

Mlig455_026005 {REF} {Length: 5002} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=25.4]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=94.7, Expect=2e-19]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=95.5, Expect=1e-19]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=105, Expect=1e-22]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=105, Expect=2e-23]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=111, Expect=1e-24]} {RNA1509_11170} {RNA1310_2597.1} {RNA815_17158}

Mlig455_070429 {REF} {Length: 5697} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=25.4]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=97.4, Expect=5e-20]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=96.7, Expect=6e-20]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=113, Expect=4e-25]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=113, Expect=3e-25]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=113, Expect=4e-25]} {RNA1509_11170, RNA1509_29877} {RNA1310_2597.1, RNA1509_11170, RNA1509_29877} {RNA1509_11170, RNA1509_29877, RNA815_3609}
20. MligTC455_47808 151 3.15 Mlig455_066806

Neo: -

Age: -

 STAC2 0.961 - - - - 0.961 - Mlig455_066806 {REF} {Length: 4661} {Pfam: SH3 domain [PF00018.30, score=41.7]; Variant SH3 domain [PF14604.8, score=35.5]} {Human: ENSG00000141750, STAC2, SH3 and cysteine rich domain 2, [RH, Score=72.8, Expect=1e-12]} {Mouse: ENSMUSG00000017400, Stac2, SH3 and cysteine rich domain 2, [RH, Score=72.0, Expect=2e-12]} {Dmel: FBgn0263980, CG43729, [RH, Score=149, Expect=5e-36]} {Celegans: WBGene00006791, unc-57, Endophilin-A homolog, [Score=53.9, Expect=2e-08]} {Smed: dd_Smed_v6_14652_0_1, dd_Smed_v6_14652_0_1, [Score=172, Expect=1e-43]} {RNA1509_54523} {RNA1310_1618} {RNA815_6997}
21. MligTC455_16533 307 6.41 Mlig455_001056

Neo: -

Age: -

 MAP3K12 0.96 - - - - 0.960 - Mlig455_001056 {REF} {Length: 5078} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=186.2]; Protein kinase domain [PF00069.27, score=149.7]} {Human: ENSG00000139625, MAP3K12, mitogen-activated protein kinase kinase kinase 12, [RH, Score=298, Expect=4e-88]; ENSG00000073803, MAP3K13, mitogen-activated protein kinase kinase kinase 13, [RH, Score=284, Expect=3e-82]} {Mouse: ENSMUSG00000023050, Map3k12, mitogen-activated protein kinase kinase kinase 12, [RH, Score=297, Expect=8e-88]; ENSMUSG00000033618, Map3k13, mitogen-activated protein kinase kinase kinase 13, [RH, Score=285, Expect=8e-83]} {Dmel: FBgn0036896, wnd, wallenda, [RH, Score=278, Expect=2e-80]} {Celegans: WBGene00001008, dlk-1, Mitogen-activated protein kinase kinase kinase dlk-1, [RH, Score=252, Expect=2e-71]} {Smed: dd_Smed_v6_8838_0_1, dd_Smed_v6_8838_0_1, [RH, Score=247, Expect=2e-69]} {RNA1509_23640, RNA1509_33629} {RNA1310_3590, RNA1509_23640, RNA1509_33629} {RNA1509_23640, RNA1509_33629, RNA815_3292}
22. MligTC455_50146 37 0.77 Mlig455_050983

Neo: -

Age: -

 NPSR1 0.96 - - - - 0.960 - Mlig455_050983 {REF} {Length: 1326} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=105.5]} {Human: ENSG00000187258, NPSR1, neuropeptide S receptor 1, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000029255, Gnrhr, gonadotropin releasing hormone receptor, [Score=66.6, Expect=4e-12]; ENSMUSG00000044014, Npy5r, neuropeptide Y receptor Y5, [Score=65.5, Expect=3e-11]} {Dmel: FBgn0036278, CrzR, Corazonin receptor, [Score=72.8, Expect=1e-13]} {Celegans: WBGene00013642, daf-38, G-protein coupled receptor daf-38, [Score=65.5, Expect=1e-11]} {Smed: dd_Smed_v6_75337_0_1, dd_Smed_v6_75337_0_1, [Score=66.6, Expect=2e-12]} {RNA1310_64751.2}
23. MligTC455_46444 201 4.19 Mlig455_001021

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_001021 {REF} {Length: 629} {RNA1509_14730} {RNA1310_23260} {RNA815_18139}
24. MligTC455_50567 146 3.04 Mlig455_012858

Neo: -

Age: -

Region-specific R2: 6.162

Region-enriched R2: 5.988/0.01054

 0.959 - - - - 0.959 - Mlig455_012858 {REF} {Length: 1282} {Pfam: F5/8 type C domain [PF00754.27, score=27.5]} {Smed: dd_Smed_v6_36585_0_1, dd_Smed_v6_36585_0_1, [RH, Score=64.3, Expect=4e-12]} {RNA1310_34633} {RNA815_12537}
25. MligTC455_50712 23 0.47 Mlig455_006134

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_006134 {REF} {Length: 3618} {RNA1509_30244} {RNA1310_26636, RNA1509_30244} {RNA1509_30244, RNA815_48134}
26. MligTC455_17351 766 15.96 Mlig455_009441

Neo: -

Age: -

Region-enriched R2: 2.466/0.00083
Region-enriched R4: 1.757/0.02374

 USH2A 0.958 - - - - 0.958 - Mlig455_009441 {REF} {Length: 3984} {Pfam: Fibronectin type III domain [PF00041.23, score=76.6]; Neuron-derived neurotrophic factor [PF10179.11, score=24.4]; Fibronectin type III domain [PF16893.7, score=23.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=22.6]; HEAT repeats [PF13646.8, score=22.2]} {Human: ENSG00000042781, USH2A, usherin, [Score=94.7, Expect=7e-19]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=77.0, Expect=1e-13]} {Dmel: FBgn0259735, CG42389, [Score=59.3, Expect=2e-08]} {Celegans: WBGene00010558, ptp-4, Tyrosine-protein phosphatase 4, [Score=51.2, Expect=4e-06]} {Smed: dd_Smed_v6_15017_0_1, dd_Smed_v6_15017_0_1, [RH, Score=411, Expect=8e-129]} {RNA1509_13146, RNA1509_35474, RNA1509_50831} {RNA1310_2905.1, RNA1509_13146, RNA1509_35474, RNA1509_50831} {RNA1509_13146, RNA1509_35474, RNA1509_50831, RNA815_2595.1}
27. MligTC455_43683 520 10.83 Mlig455_029440

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.407

 0.958 - - - - 0.958 - Mlig455_029440 {REF} {Length: 1842} {RNA1509_21217} {RNA1310_16933.1, RNA1509_21217} {RNA1509_21217, RNA815_7959}
28. MligTC455_44536 178 3.71 Mlig455_002956

Neo: -

Age: -

 ALX3 0.958 - - - - 0.958 - Mlig455_002956 {REF} {Length: 2217} {Pfam: Homeodomain [PF00046.31, score=82.6]} {Human: ENSG00000156150, ALX3, ALX homeobox 3, [RH, Score=135, Expect=5e-36]; ENSG00000052850, ALX4, ALX homeobox 4, [RH, Score=134, Expect=4e-35]; ENSG00000180318, ALX1, ALX homeobox 1, [RH, Score=129, Expect=6e-34]} {Mouse: ENSMUSG00000040310, Alx4, aristaless-like homeobox 4, [RH, Score=134, Expect=4e-35]; ENSMUSG00000014603, Alx3, aristaless-like homeobox 3, [RH, Score=134, Expect=1e-35]; ENSMUSG00000036602, Alx1, ALX homeobox 1, [RH, Score=129, Expect=1e-34]} {Dmel: FBgn0020617, Rx, Retinal Homeobox, [RH, Score=119, Expect=8e-29]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=116, Expect=4e-29]} {Smed: dd_Smed_v6_16955_0_1, dd_Smed_v6_16955_0_1, [RH, Score=132, Expect=7e-35]} {RNA1310_34642} {RNA815_45742}
29. MligTC455_42513 70 1.45 Mlig455_023063, Mlig455_023065

Neo: -

Age: -

 KCNC2 0.957 - - - - 0.957 -

Mlig455_023063 {REF} {Length: 2276} {Pfam: Ion transport protein [PF00520.33, score=123.8]; BTB/POZ domain [PF02214.24, score=86.7]; Ion channel [PF07885.18, score=37.0]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=284, Expect=7e-87]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=280, Expect=4e-85]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=271, Expect=2e-81]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=279, Expect=4e-85]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=271, Expect=3e-81]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=285, Expect=3e-87]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [Score=303, Expect=4e-94]} {Smed: dd_Smed_v6_13250_0_2, dd_Smed_v6_13250_0_2, [Score=286, Expect=3e-88]} {RNA1509_33421} {RNA1310_15684} {RNA815_16308}

Mlig455_023065 {REF} {Length: 2276} {Pfam: Ion transport protein [PF00520.33, score=123.8]; BTB/POZ domain [PF02214.24, score=86.7]; Ion channel [PF07885.18, score=37.0]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=284, Expect=7e-87]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=280, Expect=4e-85]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=271, Expect=2e-81]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=279, Expect=4e-85]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=271, Expect=3e-81]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=285, Expect=3e-87]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [Score=303, Expect=4e-94]} {Smed: dd_Smed_v6_13250_0_2, dd_Smed_v6_13250_0_2, [Score=286, Expect=3e-88]} {RNA1509_33421} {RNA1310_15684} {RNA815_16308}
30. MligTC455_53960 381 7.93 Mlig455_039523

Neo: -

Age: logFC(26M/2M)=-0.527

Region-enriched R2: 1.863/0.02753

 TTLL7 0.957 - - - - 0.957 - Mlig455_039523 {REF} {Length: 2811} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=44.5]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=146, Expect=5e-37]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=261, Expect=2e-76]} {Dmel: FBgn0039501, CG5987, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=118, Expect=1e-27]} {RNA1509_8901} {RNA1310_4651} {RNA815_1757}
31. MligTC455_25416 74 1.53 Mlig455_023019, Mlig455_023116

Neo: -

Age: -

 KCNK18 0.956 - - - - 0.956 -

Mlig455_023019 {REF} {Length: 2752} {Pfam: Ion channel [PF07885.18, score=122.1]; Sodium ion transport-associated [PF06512.15, score=20.3]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=106, Expect=8e-25]} {Dmel: FBgn0033257, sand, sandman, [Score=147, Expect=1e-39]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=157, Expect=1e-43]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=323, Expect=4e-107]} {RNA1509_41017} {RNA1310_13859.1} {RNA815_18063}

Mlig455_023116 {REF} {Length: 3009} {Pfam: Ion channel [PF07885.18, score=122.1]; Sodium ion transport-associated [PF06512.15, score=19.2]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=100, Expect=2e-22]; ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=95.1, Expect=2e-20]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=106, Expect=1e-24]} {Dmel: FBgn0033257, sand, sandman, [Score=149, Expect=3e-40]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=159, Expect=4e-44]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=325, Expect=1e-107]} {RNA1509_41017} {RNA1310_13859.1, RNA1509_41017} {RNA1509_41017, RNA815_18063}
32. MligTC455_34524 155 3.22 Mlig455_021291

Neo: -

Age: Down-Up-Down

Region-specific R2: 4.905

Region-enriched R2: 4.200/0.01842

 0.956 - - - - 0.956 - Mlig455_021291 {REF} {Length: 1478} {NoTransDecoderORF} {RNA1509_56543} {RNA1310_26920, RNA1509_56543} {RNA1509_56543, RNA815_11718}
33. MligTC455_23908 319 6.64 Mlig455_035672, Mlig455_035768

Neo: -

Age: -

Region-enriched R8: 3.529/0.00166

 SDCBP 0.955 - - - - 0.955 -

Mlig455_035672 {REF} {Length: 2598} {Pfam: PDZ domain [PF00595.26, score=78.0]; PDZ domain [PF17820.3, score=57.4]; PDZ domain [PF13180.8, score=42.0]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=57.0, Expect=2e-08]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=59.3, Expect=8e-09]; ENSMUSG00000028249, Sdcbp, syndecan binding protein, [Score=58.2, Expect=2e-09]} {Dmel: FBgn0029835, CG5921, [Score=67.4, Expect=2e-11]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [RH, Score=188, Expect=2e-54]} {RNA1509_47757} {RNA1310_7845.1} {RNA815_33452}

Mlig455_035768 {REF} {Length: 2416} {Pfam: PDZ domain [PF00595.26, score=75.7]; PDZ domain [PF17820.3, score=57.2]; PDZ domain [PF13180.8, score=43.7]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=62.0, Expect=1e-09]} {Dmel: FBgn0029835, CG5921, [Score=64.7, Expect=1e-10]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [RH, Score=188, Expect=6e-54]} {RNA1509_47757} {RNA1310_7845.1} {RNA815_33452}
34. MligTC455_42088 72 1.5 Mlig455_028244

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_028244 {REF} {Length: 2632} {RNA1509_40406} {RNA1310_12938} {RNA815_16887}
35. MligTC455_19470 80 1.66 Mlig455_002707

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_002707 {REF} {Length: 260} {NoTransDecoderORF} {RNA1509_46200} {RNA1310_613.1} {RNA815_5431}
36. MligTC455_39313 100 2.07 Mlig455_002259

Neo: -

Age: -

 SMOC1 0.953 - - - - 0.953 - Mlig455_002259 {REF} {Length: 2954} {Pfam: Thyroglobulin type-1 repeat [PF00086.20, score=83.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=49.9]; Kazal-type serine protease inhibitor domain [PF07648.17, score=37.6]; Kazal-type serine protease inhibitor domain [PF00050.23, score=36.6]; EF-hand domain [PF13405.8, score=31.1]; EF-hand domain pair [PF13499.8, score=30.2]; EF hand [PF00036.34, score=26.6]; EF hand [PF13202.8, score=20.9]} {Human: ENSG00000198732, SMOC1, SPARC related modular calcium binding 1, [RH, Score=80.5, Expect=3e-15]} {Mouse: ENSMUSG00000021136, Smoc1, SPARC related modular calcium binding 1, [RH, Score=82.4, Expect=4e-16]} {Dmel: FBgn0262169, magu, [RH, Score=145, Expect=4e-36]} {RNA1509_16659} {RNA1310_6756, RNA1509_16659} {RNA1509_16659, RNA815_13591}
37. MligTC455_41772 160 3.34 Mlig455_033633

Neo: -

Age: Down-Up-Down

 RAB10 0.953 - - - - 0.953 - Mlig455_033633 {REF} {Length: 1668} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=216.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.4]; ADP-ribosylation factor family [PF00025.23, score=63.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=29.4]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.8]; RsgA GTPase [PF03193.18, score=23.0]; 50S ribosome-binding GTPase [PF01926.25, score=18.9]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [Score=259, Expect=2e-88]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [Score=259, Expect=1e-88]} {Dmel: FBgn0015789, Rab10, [Score=246, Expect=2e-83]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [Score=244, Expect=1e-82]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=224, Expect=1e-74]} {RNA1509_24596, RNA1509_59464} {RNA1310_45042, RNA1509_24596, RNA1509_59464} {RNA1509_24596, RNA1509_59464, RNA815_22097}
38. MligTC455_14130 101 2.11 Mlig455_028802

Neo: -

Age: -

Region-enriched R7: 4.171/0.00325

 0.952 - - - - 0.952 - Mlig455_028802 {REF} {Length: 1282} {Pfam: Lectin C-type domain [PF00059.23, score=21.4]} {RNA1509_20946} {RNA1310_33562} {RNA815_30982}
39. MligTC455_28073 46 0.96 Mlig455_015569

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_015569 {REF} {Length: 1631} {NoTransDecoderORF} {RNA1509_27021} {RNA1310_14467} {RNA815_5428.1}
40. MligTC455_45196 415 8.66 Mlig455_012327

Neo: -

Age: logFC(26M/2M)=-0.373

 INVS 0.952 - - - - 0.952 - Mlig455_012327 {REF} {Length: 3620} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=130.7]; Ankyrin repeats (many copies) [PF13637.8, score=103.5]; Ankyrin repeats (many copies) [PF13857.8, score=90.3]; Ankyrin repeat [PF13606.8, score=74.3]; Ankyrin repeat [PF00023.32, score=60.1]} {Human: ENSG00000119509, INVS, inversin, [Score=114, Expect=3e-25]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=111, Expect=9e-25]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=110, Expect=6e-24]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=107, Expect=3e-23]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=107, Expect=2e-23]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=104, Expect=4e-22]; ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=103, Expect=5e-22]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=102, Expect=2e-21]} {Dmel: FBgn0260487, CG42534, [Score=112, Expect=6e-25]} {Celegans: WBGene00021304, nphp-2, NePHronoPhthisis (Human kidney disease) homolog, [Score=99.0, Expect=5e-21]} {Smed: dd_Smed_v6_16174_0_1, dd_Smed_v6_16174_0_1, [Score=115, Expect=3e-26]} {RNA1509_13535, RNA1509_36786} {RNA1310_5307.1, RNA1509_36786} {RNA1509_36786, RNA815_942}
41. MligTC455_50532 259 5.4 Mlig455_019987

Neo: -

Age: Down-Up-Down

 NEFH 0.951 - - - - 0.951 - Mlig455_019987 {REF} {Length: 4055} {Human: ENSG00000100285, NEFH, neurofilament heavy, [Score=65.5, Expect=3e-10]} {RNA1509_41200, RNA1509_57173} {RNA1310_3614.2, RNA1509_41200, RNA1509_57173} {RNA1509_41200, RNA1509_57173, RNA815_5328}
42. MligTC455_27692 1230 25.62 Mlig455_041598

Neo: -

Age: logFC(26M/2M)=-0.459

Region-enriched R7: 1.679/0.00325
Region-enriched R8: 1.607/0.03580
Region-enriched R2: 1.508/0.02284

 TUBA1A 0.95 - - - - 0.950 - Mlig455_041598 {REF} {Length: 2325} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=229.7]; Tubulin C-terminal domain [PF03953.19, score=175.5]; Tubulin domain [PF14881.8, score=18.9]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=926, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=923, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=926, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=923, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=917, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=850, Expect=0.0]} {Smed: dd_Smed_v6_38_0_1, dd_Smed_v6_38_0_1, [RH, Score=924, Expect=0.0]} {RNA1509_21352, RNA1509_42319, RNA1509_9718} {RNA1310_10339.1, RNA1509_21352, RNA1509_42319} {RNA1509_21352, RNA1509_42319, RNA815_1715.1}
43. MligTC455_44373 201 4.19 Mlig455_049801

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_049801 {REF} {Length: 3159} {Pfam: Innexin [PF00876.20, score=306.5]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=81.6, Expect=3e-17]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=239, Expect=1e-76]} {Smed: dd_Smed_v6_6114_0_3, dd_Smed_v6_6114_0_3, [Score=384, Expect=1e-131]} {RNA1509_40288} {RNA1310_5287.1} {RNA815_16730}
44. MligTC455_52068 1020 21.25 Mlig455_025175, Mlig455_029872, Mlig455_063946

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_025175 {REF} {Length: 2628} {Pfam: TIR domain [PF13676.8, score=87.5]; TIR domain [PF01582.22, score=23.3]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=162, Expect=3e-42]} {RNA1509_21634} {RNA1310_3928} {RNA815_4298}

Mlig455_029872 {REF} {Length: 2468} {Pfam: TIR domain [PF13676.8, score=86.6]; TIR domain [PF01582.22, score=23.5]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=162, Expect=3e-42]} {RNA1509_21634} {RNA1310_3928} {RNA815_4298}

Mlig455_063946 {REF} {Length: 2373} {Pfam: TIR domain [PF13676.8, score=87.4]; TIR domain [PF01582.22, score=23.3]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=162, Expect=4e-42]} {RNA1509_21634} {RNA1310_3928, RNA1509_21634} {RNA1509_21634, RNA815_4298}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA