Data search


search
Exact
Search

Results for MligTC455_17351

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17351 766 15.96 Mlig455_009441

Neo: -

Age: -

Region-enriched R2: 2.466/0.00083
Region-enriched R4: 1.757/0.02374

USH2A Mlig455_009441 {REF} {Length: 3984} {Pfam: Fibronectin type III domain [PF00041.23, score=76.6]; Neuron-derived neurotrophic factor [PF10179.11, score=24.4]; Fibronectin type III domain [PF16893.7, score=23.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=22.6]; HEAT repeats [PF13646.8, score=22.2]} {Human: ENSG00000042781, USH2A, usherin, [Score=94.7, Expect=7e-19]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=77.0, Expect=1e-13]} {Dmel: FBgn0259735, CG42389, [Score=59.3, Expect=2e-08]} {Celegans: WBGene00010558, ptp-4, Tyrosine-protein phosphatase 4, [Score=51.2, Expect=4e-06]} {Smed: dd_Smed_v6_15017_0_1, dd_Smed_v6_15017_0_1, [RH, Score=411, Expect=8e-129]} {RNA1509_13146, RNA1509_35474, RNA1509_50831} {RNA1310_2905.1, RNA1509_13146, RNA1509_35474, RNA1509_50831} {RNA1509_13146, RNA1509_35474, RNA1509_50831, RNA815_2595.1}

Cumulative graph for MligTC455_17351

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.5 4.228 0.01431 0.33673
RegionR2 2.466 4.228 0.00001 0.00083
RegionR3 1.089 4.228 0.12185 0.60326
RegionR4 1.757 4.228 0.00289 0.02374
RegionR5 0.422 4.228 0.61192 0.96890
RegionR6 0.658 4.228 0.43300 0.99563
RegionR7 0.812 4.228 0.37142 1.00000
RegionR8 0.295 4.228 0.73520 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.299 4.228 0.04257 0.67581
RegenerationR2 0.234 4.228 0.44041 0.84011
RegenerationR3 0.288 4.228 0.44684 0.83056
RegenerationR4 -0.648 4.228 0.08120 0.45088
RegenerationR5 0.061 4.228 0.86883 1.00000
RegenerationR6 -0.229 4.228 0.60638 0.87198
RegenerationBL 0.849 4.228 0.07233 0.31341
RegenerationTP 0.525 4.228 0.35895 0.79936


Genes with expression patterns similar to MligTC455_17351

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17351 766 15.96 Mlig455_009441

Neo: -

Age: -

Region-enriched R2: 2.466/0.00083
Region-enriched R4: 1.757/0.02374

USH2A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_009441 {REF} {Length: 3984} {Pfam: Fibronectin type III domain [PF00041.23, score=76.6]; Neuron-derived neurotrophic factor [PF10179.11, score=24.4]; Fibronectin type III domain [PF16893.7, score=23.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=22.6]; HEAT repeats [PF13646.8, score=22.2]} {Human: ENSG00000042781, USH2A, usherin, [Score=94.7, Expect=7e-19]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=77.0, Expect=1e-13]} {Dmel: FBgn0259735, CG42389, [Score=59.3, Expect=2e-08]} {Celegans: WBGene00010558, ptp-4, Tyrosine-protein phosphatase 4, [Score=51.2, Expect=4e-06]} {Smed: dd_Smed_v6_15017_0_1, dd_Smed_v6_15017_0_1, [RH, Score=411, Expect=8e-129]} {RNA1509_13146, RNA1509_35474, RNA1509_50831} {RNA1310_2905.1, RNA1509_13146, RNA1509_35474, RNA1509_50831} {RNA1509_13146, RNA1509_35474, RNA1509_50831, RNA815_2595.1}
2. MligTC455_25588 1046 21.8 Mlig455_029794

Neo: -

Age: -

Region-enriched R2: 2.896/0.00002

3.412 - - 0.787 0.953 0.933 0.739 Mlig455_029794 {REF} {Length: 1354} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=40.1]; Domain of unknown function (DUF1848) [PF08902.13, score=20.8]} {RNA1509_17753} {RNA1310_70608} {RNA815_1498.1}
3. MligTC455_39735 601 12.52 Mlig455_014637

Neo: -

Age: Down-Up-Down

Region-enriched R2: 1.439/0.03156

3.395 - 0.704 - 0.973 0.770 0.948 Mlig455_014637 {REF} {Length: 3559} {Pfam: Domain of unknown function (DUF4537) [PF15057.8, score=61.8]; von Willebrand factor type A domain [PF13768.8, score=20.3]} {Smed: dd_Smed_v6_10837_0_1, dd_Smed_v6_10837_0_1, [RH, Score=94.7, Expect=1e-19]} {RNA1509_28750, RNA1509_45023} {RNA1310_4730, RNA1509_28750, RNA1509_45023} {RNA1509_28750, RNA1509_45023, RNA815_8808}
4. MligTC455_41537 411 8.57 Mlig455_058671

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.369

CCDC170 3.386 - 0.720 0.877 - 0.835 0.954 Mlig455_058671 {REF} {Length: 4116} {Human: ENSG00000120262, CCDC170, coiled-coil domain containing 170, [RH, Score=284, Expect=8e-84]} {Mouse: ENSMUSG00000019767, Ccdc170, coiled-coil domain containing 170, [RH, Score=274, Expect=4e-80]} {Dmel: FBgn0263079, CG43338, [RH, Score=117, Expect=1e-26]} {Smed: dd_Smed_v6_10140_0_1, dd_Smed_v6_10140_0_1, [RH, Score=304, Expect=4e-91]} {RNA1509_3115} {RNA1310_2598, RNA1509_3115} {RNA1509_3115, RNA815_746}
5. MligTC455_45245 945 19.69 Mlig455_020601

Neo: -

Age: -

SPAG16 3.358 - - 0.770 0.958 0.759 0.871 Mlig455_020601 {REF} {Length: 1546} {Pfam: WD domain, G-beta repeat [PF00400.34, score=85.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.9]} {Human: ENSG00000144451, SPAG16, sperm associated antigen 16, [Score=163, Expect=1e-43]} {Mouse: ENSMUSG00000053153, Spag16, sperm associated antigen 16, [Score=164, Expect=7e-44]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=73.9, Expect=5e-14]} {Celegans: WBGene00007972, prp-4, Yeast PRP (Splicing factor) related, [Score=73.2, Expect=1e-13]} {Smed: dd_Smed_v6_6137_0_1, dd_Smed_v6_6137_0_1, [Score=206, Expect=6e-60]} {RNA1509_41329} {RNA1310_9669.1} {RNA815_12897}
6. MligTC455_44050 2086 43.46 Mlig455_028045, Mlig455_028051

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.242

Region-specific R2: 6.161

Region-enriched R2: 7.072/0.00000
Region-enriched R3: 3.149/0.00025

2.609 - - - 0.891 0.962 0.756

Mlig455_028045 {REF} {Length: 1156} {RNA1509_31459, RNA1509_3903} {RNA1310_2730.2, RNA1509_31459, RNA1509_3903} {RNA1509_31459, RNA1509_3903, RNA815_7682}

Mlig455_028051 {REF} {Length: 871} {NoTransDecoderORF} {RNA1509_3903} {RNA1310_15260} {RNA815_7682}
7. MligTC455_43001 2139 44.57 Mlig455_004256, Mlig455_004325

Neo: -

Age: -

Region-enriched R2: 2.362/0.00019

GLUD1 2.568 - - 0.831 0.956 0.781 -

Mlig455_004256 {REF} {Length: 1969} {Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain [PF02812.20, score=185.6]; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=175.9]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [Score=639, Expect=0.0]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [Score=639, Expect=0.0]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [Score=639, Expect=0.0]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [Score=613, Expect=0.0]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [Score=558, Expect=0.0]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [Score=641, Expect=0.0]} {RNA1509_30743} {RNA1310_2661.2} {RNA815_713.2}

Mlig455_004325 {REF} {Length: 2236} {Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain [PF02812.20, score=185.5]; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=174.7]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [Score=642, Expect=0.0]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [Score=640, Expect=0.0]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [Score=641, Expect=0.0]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [Score=613, Expect=0.0]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [Score=558, Expect=0.0]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [Score=639, Expect=0.0]} {RNA1509_10773, RNA1509_30743} {RNA1310_2661.2, RNA1509_10773, RNA1509_30743} {RNA1509_10773, RNA1509_30743, RNA815_713.2}
8. MligTC455_33842 492 10.26 Mlig455_004899

Neo: -

Age: -

Region-enriched R2: 2.178/0.01972

CDKL1 2.565 - - 0.768 0.984 0.813 - Mlig455_004899 {REF} {Length: 2500} {Pfam: Protein kinase domain [PF00069.27, score=247.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.6]; Haspin like kinase domain [PF12330.10, score=18.7]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000100490, CDKL1, cyclin dependent kinase like 1, [RH, Score=429, Expect=3e-150]; ENSG00000205111, CDKL4, cyclin dependent kinase like 4, [RH, Score=422, Expect=2e-148]} {Mouse: ENSMUSG00000020990, Cdkl1, cyclin-dependent kinase-like 1 (CDC2-related kinase), [RH, Score=432, Expect=7e-152]; ENSMUSG00000033966, Cdkl4, cyclin-dependent kinase-like 4, [RH, Score=423, Expect=3e-148]} {Dmel: FBgn0031730, CG7236, [RH, Score=381, Expect=6e-131]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [RH, Score=396, Expect=4e-136]} {Smed: dd_Smed_v6_9353_0_1, dd_Smed_v6_9353_0_1, [RH, Score=481, Expect=5e-171]} {RNA1509_19679} {RNA1310_6686.1} {RNA815_5397}
9. MligTC455_44950 7633 159.02 Mlig455_035700, Mlig455_035793

Neo: -

Age: -

MCEE 2.521 - - 0.841 0.956 0.724 -

Mlig455_035700 {REF} {Length: 1051} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=67.4]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=32.2]; Glyoxalase-like domain [PF13468.8, score=24.0]} {Human: ENSG00000124370, MCEE, methylmalonyl-CoA epimerase, [RH, Score=187, Expect=2e-60]} {Mouse: ENSMUSG00000033429, Mcee, methylmalonyl CoA epimerase, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00008415, mce-1, Methylmalonyl-CoA Epimerase; Mitochondrial methylmalonyl-CoA epimerase, [RH, Score=153, Expect=7e-48]} {Smed: dd_Smed_v6_3348_1_2, dd_Smed_v6_3348_1_2, [RH, Score=208, Expect=1e-69]} {RNA1509_2628} {RNA1310_20496.1} {RNA815_15365}

Mlig455_035793 {REF} {Length: 1052} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=67.4]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=32.2]; Glyoxalase-like domain [PF13468.8, score=24.0]} {Human: ENSG00000124370, MCEE, methylmalonyl-CoA epimerase, [RH, Score=187, Expect=2e-60]} {Mouse: ENSMUSG00000033429, Mcee, methylmalonyl CoA epimerase, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00008415, mce-1, Methylmalonyl-CoA Epimerase; Mitochondrial methylmalonyl-CoA epimerase, [RH, Score=153, Expect=7e-48]} {Smed: dd_Smed_v6_3348_1_2, dd_Smed_v6_3348_1_2, [RH, Score=208, Expect=1e-69]} {RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226} {RNA1310_20496.1, RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226} {RNA1509_20492, RNA1509_25178, RNA1509_2628, RNA1509_27226, RNA815_15365}
10. MligTC455_44709 1473 30.68 Mlig455_044126

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.323

Region-enriched R2: 1.087/0.01396

CFAP20 1.868 - - - 0.910 - 0.958 Mlig455_044126 {REF} {Length: 1458} {Pfam: Protein of unknown function (DUF667) [PF05018.15, score=306.8]} {Human: ENSG00000070761, CFAP20, cilia and flagella associated protein 20, [RH, Score=360, Expect=1e-128]} {Mouse: ENSMUSG00000031796, Cfap20, cilia and flagella associated protein 20, [RH, Score=363, Expect=9e-130]} {Dmel: FBgn0032248, Bug22, Basal body up regulated gene 22, [RH, Score=355, Expect=1e-126]} {Celegans: WBGene00008288, C54C6.6, Cilia- and flagella-associated protein 20, [RH, Score=333, Expect=4e-118]} {Smed: dd_Smed_v6_4843_0_1, dd_Smed_v6_4843_0_1, [RH, Score=363, Expect=2e-130]} {RNA1509_27107, RNA1509_35008, RNA1509_5810} {RNA1310_18346.2, RNA1509_27107, RNA1509_35008} {RNA1509_27107, RNA1509_35008, RNA815_7118.1}
11. MligTC455_25435 1465 30.52 Mlig455_029258, Mlig455_035644, Mlig455_035745

Neo: -

Age: Down-Up-Down

1.852 - - 0.899 - - 0.953

Mlig455_029258 {REF} {Length: 2882} {Smed: dd_Smed_v6_10509_0_1, dd_Smed_v6_10509_0_1, [RH, Score=269, Expect=5e-82]} {RNA1509_7251} {RNA1310_6183.1} {RNA815_4378.1}

Mlig455_035644 {REF} {Length: 2993} {Smed: dd_Smed_v6_10509_0_1, dd_Smed_v6_10509_0_1, [RH, Score=265, Expect=2e-80]} {RNA1509_50619, RNA1509_7251} {RNA1310_6183.1, RNA1509_50619, RNA1509_7251} {RNA1509_50619, RNA1509_7251, RNA815_4378.1}

Mlig455_035745 {REF} {Length: 3080} {Smed: dd_Smed_v6_10509_0_1, dd_Smed_v6_10509_0_1, [RH, Score=266, Expect=8e-81]} {RNA1509_50619} {RNA1310_6183.1} {RNA815_4378.1}
12. MligTC455_46888 3493 72.77 Mlig455_023236

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.334

Regeneration-downregulated TP: -1.196

Regeneration-depleted TP: -1.196

SLC25A14 1.815 - - - 0.952 0.863 - Mlig455_023236 {REF} {Length: 4876} {Pfam: Mitochondrial carrier protein [PF00153.29, score=159.1]} {Human: ENSG00000102078, SLC25A14, solute carrier family 25 member 14, [Score=216, Expect=1e-68]; ENSG00000174032, SLC25A30, solute carrier family 25 member 30, [Score=213, Expect=2e-68]} {Mouse: ENSMUSG00000031105, Slc25a14, solute carrier family 25 (mitochondrial carrier, brain), member 14, [Score=218, Expect=2e-69]; ENSMUSG00000022003, Slc25a30, solute carrier family 25, member 30, [Score=213, Expect=6e-68]} {Dmel: FBgn0036199, Bmcp, [Score=186, Expect=2e-57]} {Celegans: WBGene00015186, misc-1, MItochondrial Solute Carrier, [Score=137, Expect=1e-38]} {Smed: dd_Smed_v6_8945_0_8, dd_Smed_v6_8945_0_8, [Score=186, Expect=1e-57]} {RNA1509_23992, RNA1509_51810} {RNA1310_10029, RNA1509_51810} {RNA1509_51810, RNA815_7763.1}
13. MligTC455_52120 179 3.73 Mlig455_024423, Mlig455_024577

Neo: -

Age: Down-Up-Down

Region-enriched R2: 4.068/0.01755

POU4F3 1.811 - - - - 0.953 0.858

Mlig455_024423 {REF} {Length: 1288} {TRANSSPLICED} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=104.8]; Homeodomain [PF00046.31, score=60.9]} {Human: ENSG00000091010, POU4F3, POU class 4 homeobox 3, [Score=212, Expect=1e-65]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [Score=212, Expect=7e-66]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [Score=211, Expect=2e-64]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [Score=209, Expect=2e-64]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [Score=188, Expect=4e-57]} {Smed: dd_Smed_v6_30562_0_1, dd_Smed_v6_30562_0_1, [Score=208, Expect=2e-64]} {RNA1509_57422} {RNA1310_23131} {RNA815_34447}

Mlig455_024577 {REF} {Length: 1325} {TRANSSPLICED} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=104.8]; Homeodomain [PF00046.31, score=60.9]} {Human: ENSG00000091010, POU4F3, POU class 4 homeobox 3, [Score=212, Expect=1e-65]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [Score=212, Expect=7e-66]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [Score=211, Expect=2e-64]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [Score=209, Expect=2e-64]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [Score=188, Expect=4e-57]} {Smed: dd_Smed_v6_30562_0_1, dd_Smed_v6_30562_0_1, [Score=208, Expect=2e-64]} {RNA1509_57422} {RNA1310_23131} {RNA815_34447}
14. MligTC455_49730 949 19.77 Mlig455_018448

Neo: -

Age: logFC(26M/2M)=-0.195

Region-enriched R2: 1.188/0.02467

TNKS 1.808 - - - - 0.844 0.964 Mlig455_018448 {REF} {Length: 3480} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.2]; Ion transport protein [PF00520.33, score=64.2]; Ankyrin repeats (many copies) [PF13857.8, score=59.3]; Ankyrin repeat [PF13606.8, score=53.2]; Ankyrin repeat [PF00023.32, score=51.3]; Ankyrin repeats (many copies) [PF13637.8, score=51.3]; Polycystin cation channel [PF08016.14, score=19.7]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=89.4, Expect=2e-17]; ENSG00000285372, AC270292.3, tankyrase, [Score=89.0, Expect=3e-17]; ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=87.4, Expect=5e-18]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=89.0, Expect=2e-17]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=83.6, Expect=6e-16]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=90.9, Expect=2e-18]} {Smed: dd_Smed_v6_10764_0_3, dd_Smed_v6_10764_0_3, [Score=80.9, Expect=1e-15]} {RNA1509_23119, RNA1509_31186, RNA1509_44376} {RNA1310_4706, RNA1509_23119, RNA1509_31186, RNA1509_44376} {RNA1509_23119, RNA1509_31186, RNA1509_44376, RNA815_1228}
15. MligTC455_45735 175 3.64 Mlig455_013937, Mlig455_039355

Neo: -

Age: Up-Down-Down

1.792 - - - - 0.953 0.839

Mlig455_013937 {REF} {Length: 1369} {RNA1310_48389} {RNA815_22666}

Mlig455_039355 {REF} {Length: 1299} {RNA1310_48389} {RNA815_22666}
16. MligTC455_46887 1771 36.89 Mlig455_023150

Neo: -

Age: logFC(26M/2M)=-0.580

SLC25A14 1.772 - - - 0.974 0.798 - Mlig455_023150 {REF} {Length: 2121} {Pfam: Mitochondrial carrier protein [PF00153.29, score=221.0]} {Human: ENSG00000102078, SLC25A14, solute carrier family 25 member 14, [RH, Score=287, Expect=1e-95]; ENSG00000174032, SLC25A30, solute carrier family 25 member 30, [RH, Score=281, Expect=2e-93]} {Mouse: ENSMUSG00000031105, Slc25a14, solute carrier family 25 (mitochondrial carrier, brain), member 14, [RH, Score=284, Expect=2e-94]; ENSMUSG00000022003, Slc25a30, solute carrier family 25, member 30, [RH, Score=281, Expect=9e-94]} {Dmel: FBgn0036199, Bmcp, [RH, Score=259, Expect=8e-85]} {Celegans: WBGene00015186, misc-1, MItochondrial Solute Carrier, [Score=166, Expect=1e-48]} {Smed: dd_Smed_v6_8945_0_8, dd_Smed_v6_8945_0_8, [RH, Score=250, Expect=1e-81]} {RNA1509_12259} {RNA1310_31014} {RNA815_1562.1}
17. MligTC455_24758 937 19.53 Mlig455_032956

Neo: -

Age: -

Region-enriched R2: 1.593/0.03261

PFN4 1.741 - - - 0.959 - 0.782 Mlig455_032956 {REF} {Length: 1604} {Pfam: Profilin [PF00235.21, score=102.2]} {Human: ENSG00000176732, PFN4, profilin family member 4, [RH, Score=99.0, Expect=4e-27]} {Mouse: ENSMUSG00000020639, Pfn4, profilin family, member 4, [RH, Score=94.4, Expect=2e-25]} {Smed: dd_Smed_v6_2107_0_1, dd_Smed_v6_2107_0_1, [RH, Score=110, Expect=7e-32]} {RNA1509_34639} {RNA1310_16901.2} {RNA815_34827}
18. MligTC455_45135 20518 427.46 Mlig455_055032, Mlig455_055049

Neo: -

Age: -

Region-enriched R2: 1.186/0.02756
Region-enriched R7: 1.141/0.01846

Regeneration-downregulated BL: -2.004

Regeneration-depleted BL: -2.004

PAM 1.721 - - - - 0.768 0.953

Mlig455_055032 {REF} {Length: 1756} {TRANSSPLICED} {Pfam: Copper type II ascorbate-dependent monooxygenase, C-terminal domain [PF03712.17, score=129.5]; Copper type II ascorbate-dependent monooxygenase, N-terminal domain [PF01082.22, score=67.9]} {Human: ENSG00000145730, PAM, peptidylglycine alpha-amidating monooxygenase, [RH, Score=205, Expect=4e-58]} {Mouse: ENSMUSG00000026335, Pam, peptidylglycine alpha-amidating monooxygenase, [Score=201, Expect=4e-57]} {Dmel: FBgn0283509, Phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [RH, Score=232, Expect=1e-72]} {Celegans: WBGene00022144, pghm-1, Probable peptidylglycine alpha-hydroxylating monooxygenase 1, [RH, Score=239, Expect=4e-76]} {Smed: dd_Smed_v6_2646_0_1, dd_Smed_v6_2646_0_1, [RH, Score=293, Expect=1e-96]} {RNA1509_979} {RNA1310_15063.1} {RNA815_4981}

Mlig455_055049 {REF} {Length: 1756} {TRANSSPLICED} {Pfam: Copper type II ascorbate-dependent monooxygenase, C-terminal domain [PF03712.17, score=129.4]; Copper type II ascorbate-dependent monooxygenase, N-terminal domain [PF01082.22, score=67.8]} {Human: ENSG00000145730, PAM, peptidylglycine alpha-amidating monooxygenase, [Score=205, Expect=3e-58]} {Mouse: ENSMUSG00000026335, Pam, peptidylglycine alpha-amidating monooxygenase, [Score=201, Expect=5e-57]} {Dmel: FBgn0283509, Phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [RH, Score=233, Expect=5e-73]} {Celegans: WBGene00022144, pghm-1, Probable peptidylglycine alpha-hydroxylating monooxygenase 1, [RH, Score=239, Expect=4e-76]} {Smed: dd_Smed_v6_2646_0_1, dd_Smed_v6_2646_0_1, [RH, Score=293, Expect=1e-96]} {RNA1509_32895, RNA1509_979} {RNA1310_15063.1, RNA1509_32895, RNA1509_979} {RNA1509_32895, RNA1509_979, RNA815_4981}
19. MligTC455_14447 1552 32.32 Mlig455_044090

Neo: -

Age: Down-Up-Down

1.697 - - - - 0.961 0.736 Mlig455_044090 {REF} {Length: 628} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4513) [PF14983.8, score=47.2]} {Smed: dd_Smed_v6_9820_0_1, dd_Smed_v6_9820_0_1, [RH, Score=92.8, Expect=2e-25]} {RNA1509_15130, RNA1509_30396} {RNA1310_35608, RNA1509_15130} {RNA1509_15130, RNA815_26600}
20. MligTC455_49911 540 11.26 Mlig455_045375

Neo: -

Age: logFC(26M/2M)=-0.375

SEC14L2 0.967 - - - 0.967 - - Mlig455_045375 {REF} {Length: 2977} {Pfam: CRAL/TRIO domain [PF00650.22, score=120.3]; Golgi-dynamics membrane-trafficking [PF13897.8, score=24.9]; CRAL/TRIO, N-terminal domain [PF03765.17, score=21.8]} {Human: ENSG00000100003, SEC14L2, SEC14 like lipid binding 2, [RH, Score=269, Expect=2e-85]; ENSG00000100012, SEC14L3, SEC14 like lipid binding 3, [RH, Score=258, Expect=7e-81]} {Mouse: ENSMUSG00000003585, Sec14l2, SEC14-like lipid binding 2, [RH, Score=271, Expect=3e-86]} {Dmel: FBgn0035146, CG13893, [Score=169, Expect=3e-47]} {Celegans: WBGene00011962, T23G5.2, CRAL-TRIO domain-containing protein T23G5.2, [RH, Score=147, Expect=6e-38]} {Smed: dd_Smed_v6_12821_0_1, dd_Smed_v6_12821_0_1, [Score=287, Expect=1e-92]} {RNA1509_35973, RNA1509_38504} {RNA1310_8092.1, RNA1509_35973, RNA1509_38504} {RNA1509_35973, RNA1509_38504, RNA815_17650}
21. MligTC455_23908 319 6.64 Mlig455_035672, Mlig455_035768

Neo: -

Age: -

Region-enriched R8: 3.529/0.00166

SDCBP 0.964 - - - - 0.964 -

Mlig455_035672 {REF} {Length: 2598} {Pfam: PDZ domain [PF00595.26, score=78.0]; PDZ domain [PF17820.3, score=57.4]; PDZ domain [PF13180.8, score=42.0]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=57.0, Expect=2e-08]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=59.3, Expect=8e-09]; ENSMUSG00000028249, Sdcbp, syndecan binding protein, [Score=58.2, Expect=2e-09]} {Dmel: FBgn0029835, CG5921, [Score=67.4, Expect=2e-11]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [RH, Score=188, Expect=2e-54]} {RNA1509_47757} {RNA1310_7845.1} {RNA815_33452}

Mlig455_035768 {REF} {Length: 2416} {Pfam: PDZ domain [PF00595.26, score=75.7]; PDZ domain [PF17820.3, score=57.2]; PDZ domain [PF13180.8, score=43.7]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=62.0, Expect=1e-09]} {Dmel: FBgn0029835, CG5921, [Score=64.7, Expect=1e-10]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [RH, Score=188, Expect=6e-54]} {RNA1509_47757} {RNA1310_7845.1} {RNA815_33452}
22. MligTC455_45659 1015 21.14 Mlig455_064934

Neo: -

Age: -

SPATA6 0.964 - - - - - 0.964 Mlig455_064934 {REF} {Length: 2158} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=79.4]} {Human: ENSG00000132122, SPATA6, spermatogenesis associated 6, [Score=75.1, Expect=3e-14]} {Mouse: ENSMUSG00000034401, Spata6, spermatogenesis associated 6, [Score=73.9, Expect=7e-14]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [Score=153, Expect=4e-43]} {RNA1509_21442, RNA1509_8489} {RNA1310_11404, RNA1509_21442} {RNA1509_21442, RNA815_25609.1}
23. MligTC455_18403 11 0.24 Mlig455_059039

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_059039 {REF} {Length: 1516} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_56484.1} {RNA815_14295}
24. MligTC455_32724 1777 37.02 Mlig455_033032, Mlig455_044088

Neo: -

Age: logFC(26M/2M)=-0.179

L3MBTL3 0.958 - - - 0.958 - -

Mlig455_033032 {REF} {Length: 6934} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=224.5]; Zinc finger, C2HC type [PF01530.20, score=38.7]} {Human: ENSG00000198945, L3MBTL3, L3MBTL3, histone methyl-lysine binding protein, [Score=376, Expect=8e-112]} {Mouse: ENSMUSG00000039089, L3mbtl3, L3MBTL3 histone methyl-lysine binding protein, [RH, Score=328, Expect=1e-94]} {Dmel: FBgn0002441, l(3)mbt, lethal (3) malignant brain tumor, [RH, Score=273, Expect=1e-73]} {Celegans: WBGene00003041, lin-61, [RH, Score=92.4, Expect=1e-18]} {Smed: dd_Smed_v6_11547_0_1, dd_Smed_v6_11547_0_1, [RH, Score=296, Expect=2e-84]} {RNA1509_44965, RNA1509_53530} {RNA1310_2333.1, RNA1509_44965} {RNA1509_44965, RNA815_3225}

Mlig455_044088 {REF} {Length: 6921} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=224.5]; Zinc finger, C2HC type [PF01530.20, score=38.8]} {Human: ENSG00000198945, L3MBTL3, L3MBTL3, histone methyl-lysine binding protein, [Score=375, Expect=2e-111]} {Mouse: ENSMUSG00000039089, L3mbtl3, L3MBTL3 histone methyl-lysine binding protein, [RH, Score=328, Expect=2e-94]} {Dmel: FBgn0002441, l(3)mbt, lethal (3) malignant brain tumor, [RH, Score=272, Expect=2e-73]} {Celegans: WBGene00003041, lin-61, [RH, Score=92.4, Expect=1e-18]} {Smed: dd_Smed_v6_11547_0_1, dd_Smed_v6_11547_0_1, [RH, Score=297, Expect=2e-84]} {RNA1509_53530} {RNA1310_2333.1} {RNA815_3225}
25. MligTC455_54336 1846 38.45 Mlig455_070447

Neo: -

Age: logFC(26M/2M)=-0.323

CEP135 0.954 - - - 0.954 - - Mlig455_070447 {REF} {Length: 4893} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=18.9]} {Human: ENSG00000174799, CEP135, centrosomal protein 135, [Score=327, Expect=4e-96]} {Mouse: ENSMUSG00000036403, Cep135, centrosomal protein 135, [Score=296, Expect=2e-85]; ENSMUSG00000060771, Tsga10, testis specific 10, [Score=283, Expect=8e-84]} {Dmel: FBgn0036480, Cep135, Centrosomal protein 135kDa, [RH, Score=92.0, Expect=1e-18]} {Smed: dd_Smed_v6_5218_0_1, dd_Smed_v6_5218_0_1, [Score=376, Expect=1e-116]} {RNA1509_41811} {RNA1310_1540} {RNA815_400.1}
26. MligTC455_28196 515 10.74 Mlig455_060468

Neo: Int S/G2/M

Age: Up-Down-Down

PIF1 0.952 - - - 0.952 - - Mlig455_060468 {REF} {Length: 3356} {Pfam: PIF1-like helicase [PF05970.16, score=124.9]; AAA domain [PF13604.8, score=56.1]; AAA domain [PF13245.8, score=30.7]; Helicase [PF02689.16, score=28.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=26.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=134, Expect=3e-32]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=129, Expect=4e-31]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=132, Expect=2e-32]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=127, Expect=1e-30]} {RNA1509_16132} {RNA1310_143.1} {RNA815_104.1}
27. MligTC455_49138 3919 81.64 Mlig455_039106, Mlig455_042792

Neo: -

Age: logFC(26M/2M)=-0.461

0.952 - - - 0.952 - -

Mlig455_039106 {REF} {Length: 1099} {RNA1509_12928, RNA1509_26821, RNA1509_27751} {RNA1310_36371, RNA1509_12928, RNA1509_26821, RNA1509_27751} {RNA1509_12928, RNA1509_26821, RNA1509_27751, RNA815_18367}

Mlig455_042792 {REF} {Length: 1094} {RNA1509_26821} {RNA1310_36371} {RNA815_18367}
28. MligTC455_26843 1466 30.55 Mlig455_027363, Mlig455_036976

Neo: -

Age: -

0.95 - - - 0.950 - -

Mlig455_027363 {REF} {Length: 6573} {Celegans: WBGene00021577, Y46B2A.2, [Score=81.6, Expect=4e-17]} {RNA1509_13878} {RNA1310_3364.3} {RNA815_4829.1}

Mlig455_036976 {REF} {Length: 5511} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=176.0]} {Celegans: WBGene00022692, ZK250.9, [Score=277, Expect=2e-80]} {RNA1509_18422, RNA1509_59525} {RNA1310_3364.3, RNA1509_59525} {RNA1509_59525, RNA815_4829.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA