M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_18440

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18440 34 0.72 Mlig455_020380

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=3.584

 Mlig455_020380 {REF} {Length: 1793} {Pfam: N-terminal domain on NACHT_NTPase and P-loop NTPases [PF17107.7, score=19.3]} {RNA1310_98420.1} {RNA815_27771}

Cumulative graph for MligTC455_18440

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.341 1.112 1.00000 1.00000
RegionR2 -1.848 1.112 0.98196 1.00000
RegionR3 -1.378 1.112 1.00000 1.00000
RegionR4 4.05 1.112 0.05101 0.19542
RegionR5 1.716 1.112 0.24601 0.55967
RegionR6 0.689 1.112 0.50852 1.00000
RegionR7 -2.1 1.112 1.00000 1.00000
RegionR8 3.213 1.112 0.15759 0.71911

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.509 1.112 1.00000 1.00000
RegenerationR2 -0.609 1.112 0.75134 0.97377
RegenerationR3 1.369 1.112 0.34482 0.76830
RegenerationR4 -0.964 1.112 0.69766 0.95242
RegenerationR5 0.007 1.112 0.97297 1.00000
RegenerationR6 1.976 1.112 0.60802 0.87283
RegenerationBL -3.714 1.112 1.00000 1.00000
RegenerationTP 0.545 1.112 0.84030 1.00000


Genes with expression patterns similar to MligTC455_18440

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18440 34 0.72 Mlig455_020380

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=3.584

 4 - - 1.000 1.000 1.000 1.000 Mlig455_020380 {REF} {Length: 1793} {Pfam: N-terminal domain on NACHT_NTPase and P-loop NTPases [PF17107.7, score=19.3]} {RNA1310_98420.1} {RNA815_27771}
2. MligTC455_18441 21 0.43 Mlig455_020447

Neo: -

Age: -

Region-enriched R4: 7.112/0.00001
Region-enriched R5: 3.726/0.02750

 1.859 - - 0.891 0.968 - - Mlig455_020447 {REF} {Length: 4044} {Pfam: Predicted membrane protein (DUF2207) [PF09972.11, score=17.8]} {RNA1509_43701} {RNA1310_40512} {RNA815_64357}
3. MligTC455_31231 989 20.6 Mlig455_054263

Neo: -

Age: logFC(26M/2M)=-0.463

Region-enriched R6: 7.633/0.00000

 NAPB 1.766 - - - 0.959 0.807 - Mlig455_054263 {REF} {Length: 1194} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=124.8]} {Human: ENSG00000125814, NAPB, NSF attachment protein beta, [Score=89.0, Expect=6e-20]} {Mouse: ENSMUSG00000027438, Napb, N-ethylmaleimide sensitive fusion protein attachment protein beta, [Score=89.0, Expect=4e-20]} {Dmel: FBgn0250791, alphaSnap, alpha Soluble NSF attachment protein, [Score=94.4, Expect=2e-22]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=85.1, Expect=4e-19]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=68.9, Expect=2e-13]} {RNA1509_51755} {RNA1310_25050.1} {RNA815_12951}
4. MligTC455_17073 1927 40.14 Mlig455_036765

Neo: -

Age: logFC(26M/2M)=-0.501

Region-enriched R6: 6.677/0.00000

 EEF1AKMT4-ECE2 1.762 - - - 0.959 0.803 - Mlig455_036765 {REF} {Length: 2961} {Pfam: Peptidase family M13 [PF01431.23, score=139.8]; Peptidase family M13 [PF05649.15, score=76.6]} {Human: ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=136, Expect=1e-32]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=136, Expect=1e-32]} {Mouse: ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=143, Expect=5e-35]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=150, Expect=3e-37]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=148, Expect=7e-37]} {Smed: dd_Smed_v6_2163_0_1, dd_Smed_v6_2163_0_1, [Score=105, Expect=2e-23]} {RNA1509_3958} {RNA1310_6028} {RNA815_2356}
5. MligTC455_17571 66 1.38 Mlig455_055064, Mlig455_064061

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.733

 1.753 - - - - 0.959 0.794

Mlig455_055064 {REF} {Length: 762} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_31425} {RNA1310_38834} {RNA815_18319}

Mlig455_064061 {REF} {Length: 903} {TRANSSPLICED} {RNA1509_31425} {RNA1310_38834} {RNA815_18319}
6. MligTC455_24897 1565 32.6 Mlig455_048310, Mlig455_048334, Mlig455_048354

Neo: -

Age: logFC(26M/2M)=-0.953

Region-enriched R6: 7.021/0.00000

 SLC6A5 1.731 - - - 0.975 0.756 -

Mlig455_048310 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=599.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=531, Expect=3e-179]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=529, Expect=1e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=523, Expect=5e-172]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=408, Expect=4e-134]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=556, Expect=0.0]} {RNA1509_14130} {RNA1310_6202.1, RNA1509_14130} {RNA1509_14130, RNA815_3548}

Mlig455_048334 {REF} {Length: 2413} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=594.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=528, Expect=4e-178]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=527, Expect=9e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=518, Expect=9e-170]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=407, Expect=8e-134]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=550, Expect=0.0]} {RNA1509_14130} {RNA1310_6202.1} {RNA815_3548}

Mlig455_048354 {REF} {Length: 2413} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=598.4]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=530, Expect=7e-179]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=528, Expect=2e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=522, Expect=2e-171]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=409, Expect=8e-135]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=556, Expect=0.0]} {RNA1509_14130, RNA1509_31856} {RNA1310_6202.1, RNA1509_31856} {RNA1509_31856, RNA815_3548}
7. MligTC455_19970 173 3.59 Mlig455_034815

Neo: -

Age: -

Region-enriched R6: 4.214/0.00162

 NR1I2 1.728 - - - 0.962 0.766 - Mlig455_034815 {REF} {Length: 2960} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=75.1]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=136, Expect=2e-34]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=129, Expect=9e-33]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=123, Expect=2e-30]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=134, Expect=3e-33]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [RH, Score=132, Expect=1e-32]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=144, Expect=1e-37]} {RNA1509_24283} {RNA1310_5453} {RNA815_10529.1}
8. MligTC455_06947 1605 33.43 Mlig455_016219, Mlig455_054265

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.362

Region-enriched R6: 8.322/0.00000

 1.725 - - - 0.958 0.767 -

Mlig455_016219 {REF} {Length: 1967} {Pfam: PPE family [PF00823.21, score=19.2]} {RNA1509_18974, RNA1509_35153, RNA1509_44922} {RNA1310_20486.2, RNA1509_18974, RNA1509_35153, RNA1509_44922} {RNA1509_18974, RNA1509_35153, RNA1509_44922, RNA815_8735.1}

Mlig455_054265 {REF} {Length: 2060} {RNA1509_35153} {RNA1310_20486.2} {RNA815_8735.1}
9. MligTC455_23510 132 2.75 Mlig455_069637

Neo: -

Age: Up-Down-Down

Region-enriched R6: 4.253/0.00031

 ABCA12 1.722 - - - 0.953 - 0.769 Mlig455_069637 {REF} {Length: 3134} {Pfam: ABC-2 family transporter protein [PF12698.9, score=136.5]; ABC-2 type transporter [PF01061.26, score=111.4]; ABC transporter [PF00005.29, score=104.4]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=36.9]; ABC-2 family transporter protein [PF12679.9, score=35.5]} {Human: ENSG00000144452, ABCA12, ATP binding cassette subfamily A member 12, [Score=125, Expect=5e-29]} {Mouse: ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=132, Expect=2e-31]} {Dmel: FBgn0039594, CG9990, [RH, Score=567, Expect=0.0]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=114, Expect=6e-26]} {Smed: dd_Smed_v6_2300_0_5, dd_Smed_v6_2300_0_5, [Score=116, Expect=1e-26]} {RNA1509_57827} {RNA1310_7775.1} {RNA815_4457}
10. MligTC455_17866 4049 84.35 Mlig455_000390

Neo: -

Age: logFC(26M/2M)=-0.584

Region-enriched R6: 7.468/0.00000

 1.705 - - - 0.954 0.751 - Mlig455_000390 {REF} {Length: 2539} {RNA1509_431, RNA1509_9289} {RNA1310_67084.1, RNA1509_431, RNA1509_9289} {RNA1509_431, RNA1509_9289, RNA815_6906.2}
11. MligTC455_44759 209 4.34 Mlig455_069031

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.375

Region-enriched R7: 3.341/0.00045

Regeneration-upregulated R6: 2.301

Regeneration-enriched R6: 2.301

 MEIS2 1.685 - - - 0.955 0.730 - Mlig455_069031 {REF} {Length: 3586} {Pfam: Homeobox KN domain [PF05920.13, score=63.0]; Homeodomain [PF00046.31, score=32.0]} {Human: ENSG00000134138, MEIS2, Meis homeobox 2, [Score=76.6, Expect=4e-14]; ENSG00000105419, MEIS3, Meis homeobox 3, [Score=76.3, Expect=3e-14]; ENSG00000143995, MEIS1, Meis homeobox 1, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000027210, Meis2, Meis homeobox 2, [Score=76.6, Expect=3e-14]; ENSMUSG00000041420, Meis3, Meis homeobox 3, [Score=76.6, Expect=1e-14]; ENSMUSG00000020160, Meis1, Meis homeobox 1, [Score=74.3, Expect=2e-13]} {Dmel: FBgn0001235, hth, homothorax, [Score=74.3, Expect=1e-13]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=74.3, Expect=9e-14]} {Smed: dd_Smed_v6_7863_0_1, dd_Smed_v6_7863_0_1, [RH, Score=103, Expect=1e-22]} {RNA1509_22023} {RNA1310_1585.1, RNA1509_22023} {RNA1509_22023, RNA815_32461}
12. MligTC455_07821 263 5.47 Mlig455_009887

Neo: -

Age: logFC(26M/2M)=-0.645

Region-enriched R6: 6.848/0.00000

 1.652 - - - 0.952 0.700 - Mlig455_009887 {REF} {Length: 1607} {RNA1310_20970} {RNA815_31710}
13. MligTC455_10670 90 1.87 Mlig455_047008

Neo: -

Age: -

 POGZ 0.996 - - - - 0.996 - Mlig455_047008 {REF} {Length: 4920} {Pfam: CIDE-N domain [PF02017.17, score=45.8]} {Human: ENSG00000143442, POGZ, pogo transposable element derived with ZNF domain, [RH, Score=135, Expect=2e-31]} {Mouse: ENSMUSG00000038902, Pogz, pogo transposable element with ZNF domain, [RH, Score=133, Expect=5e-31]} {Dmel: FBgn0033998, row, relative of woc, [RH, Score=106, Expect=8e-23]} {Smed: dd_Smed_v6_2118_0_1, dd_Smed_v6_2118_0_1, [Score=124, Expect=7e-29]} {RNA1509_22224, RNA1509_46837} {RNA1310_16138, RNA1509_46837} {RNA1509_46837, RNA815_23431}
14. MligTC455_07789 20 0.42 Mlig455_005378, Mlig455_005439

Neo: -

Age: -

 0.988 - - - 0.988 - -

Mlig455_005378 {REF} {Length: 353} {NoTransDecoderORF} {RNA1509_35184} {RNA1310_92493} {RNA815_18932.1}

Mlig455_005439 {REF} {Length: 1311} {NoTransDecoderORF} {RNA1509_35184} {RNA1310_111953} {RNA815_18932.1}
15. MligTC455_29848 39 0.82 Mlig455_013358

Neo: -

Age: -

 0.986 - - - 0.986 - - Mlig455_013358 {REF} {Length: 2217} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.0]} {RNA1509_11319} {RNA1310_7370.1} {RNA815_6444}
16. MligTC455_32192 33 0.7 Mlig455_005706

Neo: -

Age: logFC(26M/2M)=0.465

 0.982 - - - 0.982 - - Mlig455_005706 {REF} {Length: 1675} {TRANSSPLICED} {Pfam: Porphyromonas-type peptidyl-arginine deiminase [PF04371.17, score=74.0]} {RNA1509_24742} {RNA1310_26295} {RNA815_29609}
17. MligTC455_07228 9 0.2 Mlig455_064993

Neo: -

Age: -

 0.976 - - - 0.976 - - Mlig455_064993 {REF} {Length: 689} {RNA1509_39872} {RNA1310_30293}
18. MligTC455_11233 14 0.29 Mlig455_027769

Neo: Int S/G2/M

Age: Up-Down-Down

 0.976 - - 0.976 - - - Mlig455_027769 {REF} {Length: 880} {NoTransDecoderORF} {RNA1509_22816} {RNA1310_44682} {RNA815_26712}
19. MligTC455_32786 131 2.74 Mlig455_049672

Neo: -

Age: -

Region-enriched R8: 3.549/0.01587

 0.973 - - - 0.973 - - Mlig455_049672 {REF} {Length: 1559} {RNA1509_2768} {RNA1310_57876} {RNA815_42450.2}
20. MligTC455_35884 745 15.52 Mlig455_004290, Mlig455_004365

Neo: -

Age: logFC(26M/2M)=2.444

Regeneration-upregulated R6: 5.801

Regeneration-enriched R6: 5.801

 0.971 - - - 0.971 - -

Mlig455_004290 {REF} {Length: 1080} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=32.6]} {RNA1310_34690.1} {RNA815_14830.2}

Mlig455_004365 {REF} {Length: 1177} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=32.8]} {RNA1310_34690.1} {RNA815_14830.2}
21. MligTC455_24851 147 3.06 Mlig455_004279

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=3.694

 0.97 - - - 0.970 - - Mlig455_004279 {REF} {Length: 1264} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=31.9]} {RNA1310_34690.2} {RNA815_14830.1}
22. MligTC455_53060 169 3.53 Mlig455_011303, Mlig455_061129

Neo: Germline

Age: Up-Down-Down

 RHBDF1, RHBDF2 0.97 - - - 0.970 - -

Mlig455_011303 {REF} {Length: 3337} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=65.6]} {Human: ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [Score=308, Expect=2e-92]; ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [Score=299, Expect=5e-89]} {Mouse: ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [Score=307, Expect=2e-92]; ENSMUSG00000020282, Rhbdf1, rhomboid 5 homolog 1, [Score=299, Expect=4e-89]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [Score=276, Expect=1e-78]} {Celegans: WBGene00004403, rom-4, Rhomboid-like protein, [Score=267, Expect=6e-80]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [Score=337, Expect=4e-105]} {RNA1509_29149, RNA1509_30900} {RNA1310_5622.1, RNA1509_29149, RNA1509_30900} {RNA1509_29149, RNA1509_30900, RNA815_17217}

Mlig455_061129 {REF} {Length: 1362} {Pfam: Rhomboid family [PF01694.24, score=42.9]} {Human: ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [Score=120, Expect=2e-30]; ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [Score=118, Expect=1e-29]} {Mouse: ENSMUSG00000020282, Rhbdf1, rhomboid 5 homolog 1, [Score=120, Expect=2e-30]; ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [Score=115, Expect=8e-29]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [Score=102, Expect=2e-24]} {Celegans: WBGene00004403, rom-4, Rhomboid-like protein, [Score=109, Expect=8e-27]} {Smed: dd_Smed_v6_11534_0_1, dd_Smed_v6_11534_0_1, [Score=122, Expect=2e-33]} {RNA1509_29149} {RNA1310_5622.1} {RNA815_17217}
23. MligTC455_01379 19 0.39 Mlig455_064091

Neo: -

Age: -

 0.969 - - - 0.969 - - Mlig455_064091 {REF} {Length: 339} {NoTransDecoderORF} {RNA1310_148838}
24. MligTC455_01032 21 0.43 Mlig455_006069

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_006069 {REF} {Length: 2849} {RNA1509_41972} {RNA1310_1374.1} {RNA815_21848}
25. MligTC455_22992 243 5.06 Mlig455_008850

Neo: -

Age: Down-Up-Up

 0.967 - - 0.967 - - - Mlig455_008850 {REF} {Length: 4108} {TRANSSPLICED} {RNA1509_13451, RNA1509_38548} {RNA1310_12990, RNA1509_13451, RNA1509_38548} {RNA1509_13451, RNA1509_38548, RNA815_15606}
26. MligTC455_22939 9 0.19 Mlig455_008393

Neo: -

Age: -

 ERCC5 0.966 - - - 0.966 - - Mlig455_008393 {REF} {Length: 2758} {TRANSSPLICED} {Pfam: XPG N-terminal domain [PF00752.19, score=85.2]; XPG I-region [PF00867.20, score=77.8]; 5'-3' exonuclease, C-terminal SAM fold [PF01367.22, score=24.1]} {Human: ENSG00000134899, ERCC5, ERCC excision repair 5, endonuclease, [RH, Score=182, Expect=2e-46]; ENSG00000270181, BIVM-ERCC5, BIVM-ERCC5 readthrough, [RH, Score=182, Expect=2e-46]} {Mouse: ENSMUSG00000026048, Ercc5, excision repair cross-complementing rodent repair deficiency, complementation group 5, [RH, Score=179, Expect=1e-45]} {Dmel: FBgn0002887, mus201, mutagen-sensitive 201, [RH, Score=176, Expect=5e-45]} {Celegans: WBGene00019004, xpg-1, XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog, [RH, Score=105, Expect=5e-23]} {Smed: dd_Smed_v6_10808_0_1, dd_Smed_v6_10808_0_1, [RH, Score=186, Expect=1e-48]} {RNA1509_14172} {RNA1310_4988, RNA1509_14172} {RNA1509_14172, RNA815_6998}
27. MligTC455_06614 35 0.72 Mlig455_052447

Neo: -

Age: -

 0.965 - - - 0.965 - - Mlig455_052447 {REF} {Length: 869} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_20081} {RNA1310_65601} {RNA815_26807}
28. MligTC455_09271 6 0.12 Mlig455_037819

Neo: -

Age: -

 0.965 - - - 0.965 - - Mlig455_037819 {REF} {Length: 656} {NoTransDecoderORF} {RNA1310_44263}
29. MligTC455_37324 24 0.51 Mlig455_053105

Neo: -

Age: -

 ANGEL2 0.965 - - - 0.965 - - Mlig455_053105 {REF} {Length: 2320} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=66.2]} {Human: ENSG00000174606, ANGEL2, angel homolog 2, [RH, Score=213, Expect=2e-61]} {Mouse: ENSMUSG00000026634, Angel2, angel homolog 2, [RH, Score=213, Expect=1e-61]} {Dmel: FBgn0016762, angel, [RH, Score=105, Expect=1e-24]} {Celegans: WBGene00020955, angl-1, ANGeL-like deadenylase, [RH, Score=120, Expect=8e-29]} {Smed: dd_Smed_v6_9800_0_1, dd_Smed_v6_9800_0_1, [RH, Score=238, Expect=2e-72]} {RNA1509_11711} {RNA1310_14328} {RNA815_4890}
30. MligTC455_40459 62 1.3 Mlig455_053585

Neo: -

Age: Up-Down-Down

 NR2C2 0.965 - - - 0.965 - - Mlig455_053585 {REF} {Length: 5009} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=101.7]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=47.4]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [RH, Score=213, Expect=4e-59]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [RH, Score=214, Expect=2e-59]} {Dmel: FBgn0015239, Hr78, Hormone-receptor-like in 78, [RH, Score=140, Expect=3e-34]} {Celegans: WBGene00022423, nhr-41, Nuclear hormone receptor family member nhr-41, [RH, Score=144, Expect=1e-35]} {Smed: dd_Smed_v6_9123_0_1, dd_Smed_v6_9123_0_1, [RH, Score=126, Expect=1e-30]} {RNA1509_43216} {RNA1310_5171.1} {RNA815_17828}
31. MligTC455_22999 120 2.51 Mlig455_011868, Mlig455_011894

Neo: -

Age: Down-Up-Down

 SMIM29 0.964 - - - 0.964 - -

Mlig455_011868 {REF} {Length: 3261} {TRANSSPLICED} {Human: ENSG00000186577, SMIM29, small integral membrane protein 29, [RH, Score=43.9, Expect=3e-06]} {Smed: dd_Smed_v6_11815_0_1, dd_Smed_v6_11815_0_1, [RH, Score=48.1, Expect=4e-08]} {RNA1509_54100} {RNA1310_67381.1, RNA1509_54100} {RNA1509_54100, RNA815_33504}

Mlig455_011894 {REF} {Length: 3903} {TRANSSPLICED} {Human: ENSG00000186577, SMIM29, small integral membrane protein 29, [RH, Score=43.9, Expect=3e-06]} {Smed: dd_Smed_v6_11815_0_1, dd_Smed_v6_11815_0_1, [RH, Score=48.1, Expect=4e-08]} {RNA1509_54100} {RNA1310_67381.1} {RNA815_33504}
32. MligTC455_09194 22 0.46 Mlig455_033399

Neo: -

Age: -

 GIMAP4 0.963 - - - 0.963 - - Mlig455_033399 {REF} {Length: 1546} {Pfam: AIG1 family [PF04548.18, score=122.9]; 50S ribosome-binding GTPase [PF01926.25, score=42.8]; Dynamin family [PF00350.25, score=29.0]; RsgA GTPase [PF03193.18, score=21.9]; Ferrous iron transport protein B [PF02421.20, score=20.2]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [Score=95.1, Expect=7e-22]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=92.0, Expect=4e-21]; ENSMUSG00000054435, Gimap4, GTPase, IMAP family member 4, [Score=89.4, Expect=6e-20]} {RNA1310_70178}
33. MligTC455_34466 99 2.07 Mlig455_064508

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_064508 {REF} {Length: 669} {NoTransDecoderORF} {RNA1509_59804} {RNA1310_35910.2} {RNA815_21530}
34. MligTC455_51323 114 2.37 Mlig455_036899

Neo: -

Age: -

Region-enriched R5: 2.522/0.00479

 0.963 - - 0.963 - - - Mlig455_036899 {REF} {Length: 2524} {TRANSSPLICED} {Pfam: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 [PF15299.8, score=18.6]} {RNA1310_11295.1} {RNA815_14627}
35. MligTC455_29285 255 5.31 Mlig455_033402, Mlig455_033450, Mlig455_040184

Neo: -

Age: Up-Down-Down

 PPARG 0.962 - - - 0.962 - -

Mlig455_033402 {REF} {Length: 3769} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=143.4]} {Human: ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=99.0, Expect=4e-21]; ENSG00000069667, RORA, RAR related orphan receptor A, [Score=97.8, Expect=9e-21]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=97.1, Expect=3e-20]; ENSG00000198963, RORB, RAR related orphan receptor B, [Score=96.3, Expect=2e-20]; ENSG00000143365, RORC, RAR related orphan receptor C, [Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=99.0, Expect=3e-21]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=97.8, Expect=6e-21]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=97.8, Expect=1e-20]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0001323, knrl, knirps-like, [RH, Score=98.6, Expect=6e-21]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_42763_0_1, dd_Smed_v6_42763_0_1, [RH, Score=280, Expect=1e-81]} {RNA1509_43532} {RNA1310_18707, RNA1509_43532} {RNA1509_43532, RNA815_34271}

Mlig455_033450 {REF} {Length: 3596} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=143.4]} {Human: ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=99.4, Expect=3e-21]; ENSG00000069667, RORA, RAR related orphan receptor A, [Score=97.8, Expect=9e-21]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=97.1, Expect=3e-20]; ENSG00000198963, RORB, RAR related orphan receptor B, [Score=96.7, Expect=2e-20]; ENSG00000143365, RORC, RAR related orphan receptor C, [Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=99.0, Expect=3e-21]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=97.8, Expect=6e-21]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=97.8, Expect=1e-20]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0001323, knrl, knirps-like, [RH, Score=98.6, Expect=6e-21]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_42763_0_1, dd_Smed_v6_42763_0_1, [RH, Score=280, Expect=1e-81]} {RNA1509_43532} {RNA1310_18707} {RNA815_34271}

Mlig455_040184 {REF} {Length: 3754} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=143.4]} {Human: ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=99.4, Expect=3e-21]; ENSG00000069667, RORA, RAR related orphan receptor A, [Score=97.8, Expect=9e-21]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=97.1, Expect=3e-20]; ENSG00000198963, RORB, RAR related orphan receptor B, [Score=96.7, Expect=2e-20]; ENSG00000143365, RORC, RAR related orphan receptor C, [Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=99.0, Expect=3e-21]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=97.8, Expect=6e-21]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=97.8, Expect=1e-20]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0001323, knrl, knirps-like, [RH, Score=98.6, Expect=6e-21]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_42763_0_1, dd_Smed_v6_42763_0_1, [RH, Score=280, Expect=1e-81]} {RNA1509_43532} {RNA1310_18707} {RNA815_34271}
36. MligTC455_35637 73 1.51 Mlig455_040909

Neo: -

Age: Down-Up-Down

 MAP4K3 0.962 - - - 0.962 - - Mlig455_040909 {REF} {Length: 2541} {Pfam: Protein kinase domain [PF00069.27, score=71.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=48.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.4]} {Human: ENSG00000011566, MAP4K3, mitogen-activated protein kinase kinase kinase kinase 3, [Score=92.4, Expect=1e-19]} {Mouse: ENSMUSG00000024242, Map4k3, mitogen-activated protein kinase kinase kinase kinase 3, [Score=91.3, Expect=2e-19]; ENSMUSG00000021108, Prkch, protein kinase C, eta, [Score=88.6, Expect=1e-18]} {Dmel: FBgn0004784, inaC, inactivation no afterpotential C, [Score=91.3, Expect=9e-20]} {Celegans: WBGene00004032, pkc-1, Protein kinase C-like 1B, [Score=84.7, Expect=8e-18]} {Smed: dd_Smed_v6_11674_0_1, dd_Smed_v6_11674_0_1, [Score=90.5, Expect=9e-20]} {RNA1509_45033} {RNA1310_55120, RNA1509_45033} {RNA1509_45033, RNA815_54563}
37. MligTC455_36170 175 3.64 Mlig455_042283

Neo: -

Age: logFC(26M/2M)=-0.622

Region-enriched R6: 7.064/0.00000

 GHSR 0.962 - - - 0.962 - - Mlig455_042283 {REF} {Length: 2245} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=72.5]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=20.0]} {Human: ENSG00000121853, GHSR, growth hormone secretagogue receptor, [Score=61.2, Expect=1e-09]} {Mouse: ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=65.5, Expect=3e-11]} {Dmel: FBgn0038874, ETHR, [Score=48.1, Expect=1e-05]} {Celegans: WBGene00018728, frpr-8, FMRFamide Peptide Receptor family, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_15630_0_1, dd_Smed_v6_15630_0_1, [Score=76.3, Expect=6e-15]} {RNA1509_34672} {RNA1310_14573} {RNA815_16880}
38. MligTC455_37768 21 0.43 Mlig455_040181

Neo: -

Age: -

 GIMAP4 0.962 - - - 0.962 - - Mlig455_040181 {REF} {Length: 1622} {Pfam: AIG1 family [PF04548.18, score=121.3]; 50S ribosome-binding GTPase [PF01926.25, score=40.0]; Dynamin family [PF00350.25, score=29.1]; RsgA GTPase [PF03193.18, score=20.8]; AAA ATPase domain [PF13191.8, score=20.8]; ABC transporter [PF00005.29, score=20.7]; AAA domain [PF13476.8, score=19.8]; Ferrous iron transport protein B [PF02421.20, score=19.4]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [Score=92.8, Expect=1e-20]; ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=89.4, Expect=1e-19]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=92.4, Expect=6e-21]} {Smed: dd_Smed_v6_13631_0_6, dd_Smed_v6_13631_0_6, [RH, Score=51.6, Expect=2e-08]} {RNA1509_8439} {RNA1310_70178} {RNA815_62940}
39. MligTC455_42181 44 0.92 Mlig455_031104, Mlig455_031106

Neo: -

Age: -

 0.961 - - - 0.961 - -

Mlig455_031104 {REF} {Length: 904} {NoTransDecoderORF} {RNA1310_108034} {RNA815_53785}

Mlig455_031106 {REF} {Length: 851} {NoTransDecoderORF} {RNA1310_108034} {RNA815_53785}
40. MligTC455_07944 81 1.7 Mlig455_020617

Neo: -

Age: -

Regeneration-enriched R6: 6.368
Regeneration-enriched R5: 6.186

 HES1 0.96 - - - 0.960 - - Mlig455_020617 {REF} {Length: 999} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.5]} {Human: ENSG00000114315, HES1, hes family bHLH transcription factor 1, [Score=65.9, Expect=5e-13]} {Mouse: ENSMUSG00000022528, Hes1, hes family bHLH transcription factor 1, [Score=65.5, Expect=4e-13]} {Dmel: FBgn0002735, E(spl)mgamma-HLH, Enhancer of split mgamma, helix-loop-helix, [RH, Score=71.2, Expect=9e-16]} {Celegans: WBGene00003008, lin-22, Lin-22, [RH, Score=55.8, Expect=2e-10]} {Smed: dd_Smed_v6_17332_0_1, dd_Smed_v6_17332_0_1, [RH, Score=53.1, Expect=2e-09]} {RNA1310_141742}
41. MligTC455_15273 13 0.27 Mlig455_041550

Neo: -

Age: Down-Up-Down

 0.96 - - - 0.960 - - Mlig455_041550 {REF} {Length: 2261} {TRANSSPLICED} {tRNA: Ala(CGC),pseudo, score=31.3} {RNA1509_24967} {RNA1310_40192, RNA1509_24967} {RNA1509_24967, RNA815_19718}
42. MligTC455_29927 28 0.58 Mlig455_047755

Neo: -

Age: -

 MAP3K4 0.96 - - - 0.960 - - Mlig455_047755 {REF} {Length: 3225} {Pfam: Protein kinase domain [PF00069.27, score=166.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.6]; Ankyrin repeats (3 copies) [PF12796.9, score=78.5]; Ankyrin repeat [PF13606.8, score=55.5]; Ankyrin repeats (many copies) [PF13637.8, score=50.7]; Ankyrin repeats (many copies) [PF13857.8, score=49.4]; Ankyrin repeat [PF00023.32, score=42.4]; Fungal protein kinase [PF17667.3, score=26.4]; Phosphotransferase enzyme family [PF01636.25, score=18.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.2]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=134, Expect=8e-32]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=134, Expect=8e-33]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=130, Expect=1e-30]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=125, Expect=5e-29]; ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=124, Expect=1e-28]} {Dmel: FBgn0024329, Mekk1, [Score=132, Expect=2e-31]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=128, Expect=4e-30]} {Smed: dd_Smed_v6_4849_0_2, dd_Smed_v6_4849_0_2, [Score=117, Expect=7e-27]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1}
43. MligTC455_38181 22 0.45 Mlig455_020407

Neo: -

Age: -

 0.96 - - - 0.960 - - Mlig455_020407 {REF} {Length: 1478} {Pfam: Type II secretion system (T2SS), protein F [PF00482.25, score=19.0]} {RNA1310_102366} {RNA815_27771}
44. MligTC455_29454 50 1.05 Mlig455_065107

Neo: -

Age: -

 CHRNA10 0.959 - - - 0.959 - - Mlig455_065107 {REF} {Length: 3864} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=79.6]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=64.7, Expect=5e-11]; ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=61.6, Expect=5e-10]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=71.6, Expect=2e-13]} {Celegans: WBGene00000051, acr-12, AcetylCholine Receptor; Nicotinic acetylcholine receptor-like subunit ACR-12, [Score=56.2, Expect=1e-08]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=74.7, Expect=6e-15]} {RNA1509_57562} {RNA1310_27363} {RNA815_5685.1}
45. MligTC455_25567 31 0.65 Mlig455_003495, Mlig455_015560, Mlig455_037973

Neo: -

Age: -

 GLRA4 0.958 - - - 0.958 - -

Mlig455_003495 {REF} {Length: 2067} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=19.1]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.9, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=58.2, Expect=1e-08]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=58.2, Expect=1e-08]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=2e-08]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.8, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_1, dd_Smed_v6_14925_0_1, [RH, Score=609, Expect=0.0]} {RNA1310_35073.1} {RNA815_40431}

Mlig455_015560 {REF} {Length: 1799} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=19.1]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.9, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=58.2, Expect=1e-08]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=58.2, Expect=1e-08]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=2e-08]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.8, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_1, dd_Smed_v6_14925_0_1, [RH, Score=609, Expect=0.0]} {RNA1310_35073.1} {RNA815_40431}

Mlig455_037973 {REF} {Length: 1670} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=35.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=20.4]} {Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=58.5, Expect=7e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=57.4, Expect=1e-08]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=57.4, Expect=1e-08]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=54.7, Expect=1e-07]} {Dmel: FBgn0003011, ort, ora transientless, [Score=55.5, Expect=4e-08]} {Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_14925_0_2, dd_Smed_v6_14925_0_2, [Score=554, Expect=0.0]} {RNA1310_35073.2} {RNA815_40431}
46. MligTC455_29325 95 1.98 Mlig455_055248

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_055248 {REF} {Length: 3007} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=43.5]} {RNA1509_11812} {RNA1310_5637.1} {RNA815_399.1}
47. MligTC455_17867 2482 51.72 Mlig455_067961

Neo: -

Age: -

Region-enriched R6: 7.621/0.00000

 ZAN 0.957 - - - 0.957 - - Mlig455_067961 {REF} {Length: 1614} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=67.0, Expect=4e-11]} {Mouse: ENSMUSG00000000037, Scml2, Scm polycomb group protein like 2, [Score=68.9, Expect=6e-12]} {Dmel: FBgn0053300, Muc30E, Mucin 30E, [Score=62.4, Expect=6e-10]} {Celegans: WBGene00021578, Y46B2A.3, [Score=56.6, Expect=2e-08]} {RNA1509_19448, RNA1509_21524} {RNA1310_67084.1, RNA1509_21524} {RNA1509_21524, RNA815_6906.1}
48. MligTC455_35159 2 0.04 Mlig455_020719

Neo: -

Age: -

 0.957 - - - 0.957 - - Mlig455_020719 {REF} {Length: 1080} {NoTransDecoderORF} {RNA1509_13719} {RNA1310_35205} {RNA815_41642}
49. MligTC455_37998 26 0.55 Mlig455_045732, Mlig455_045786

Neo: -

Age: logFC(26M/2M)=1.008

 PRR9 0.957 - - - 0.957 - -

Mlig455_045732 {REF} {Length: 5496} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=3e-06]} {RNA1310_17667} {RNA815_26670}

Mlig455_045786 {REF} {Length: 1887} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=43.5, Expect=5e-06]} {RNA1310_17667} {RNA815_53757}
50. MligTC455_47336 188 3.92 Mlig455_012695

Neo: Irradiation

Age: -

 PPIL4 0.957 - - - 0.957 - - Mlig455_012695 {REF} {Length: 7286} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=127.3]; DEAD/DEAH box helicase [PF00270.31, score=67.8]; Helicase conserved C-terminal domain [PF00271.33, score=65.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000131013, PPIL4, peptidylprolyl isomerase like 4, [RH, Score=432, Expect=3e-140]} {Mouse: ENSMUSG00000015757, Ppil4, peptidylprolyl isomerase (cyclophilin)-like 4, [RH, Score=431, Expect=3e-140]} {Dmel: FBgn0027617, CG5808, [Score=431, Expect=7e-138]} {Celegans: WBGene00000890, sig-7, Peptidyl-prolyl cis-trans isomerase sig-7, [RH, Score=429, Expect=1e-140]} {Smed: dd_Smed_v6_5960_0_1, dd_Smed_v6_5960_0_1, [RH, Score=473, Expect=8e-157]} {RNA1509_23861} {RNA1310_14777, RNA1509_23861} {RNA1509_23861, RNA815_14242}
51. MligTC455_22940 125 2.6 Mlig455_008414

Neo: -

Age: -

 ERCC5 0.956 - - - 0.956 - - Mlig455_008414 {REF} {Length: 2753} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=78.0]; 5'-3' exonuclease, C-terminal SAM fold [PF01367.22, score=24.2]} {Human: ENSG00000134899, ERCC5, ERCC excision repair 5, endonuclease, [RH, Score=192, Expect=1e-49]; ENSG00000270181, BIVM-ERCC5, BIVM-ERCC5 readthrough, [RH, Score=192, Expect=1e-49]} {Mouse: ENSMUSG00000026048, Ercc5, excision repair cross-complementing rodent repair deficiency, complementation group 5, [RH, Score=189, Expect=6e-49]} {Dmel: FBgn0002887, mus201, mutagen-sensitive 201, [RH, Score=179, Expect=5e-46]} {Celegans: WBGene00019004, xpg-1, XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog, [RH, Score=105, Expect=6e-23]} {Smed: dd_Smed_v6_10808_0_1, dd_Smed_v6_10808_0_1, [RH, Score=189, Expect=7e-50]} {RNA1509_14172} {RNA1310_4988} {RNA815_6998}
52. MligTC455_44684 39 0.82 Mlig455_037824, Mlig455_065518, Mlig455_067165

Neo: -

Age: -

 0.956 - - - 0.956 - -

Mlig455_037824 {REF} {Length: 207} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111}

Mlig455_065518 {REF} {Length: 208} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111}

Mlig455_067165 {REF} {Length: 207} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111}
53. MligTC455_08416 34 0.71 Mlig455_017032

Neo: -

Age: -

 0.955 - - - 0.955 - - Mlig455_017032 {REF} {Length: 1293} {NoTransDecoderORF}
54. MligTC455_52619 109 2.26 Mlig455_024816

Neo: -

Age: Down-Down-Up

 PCF11 0.955 - - - 0.955 - - Mlig455_024816 {REF} {Length: 4120} {Pfam: CID domain [PF04818.15, score=23.9]} {Human: ENSG00000165494, PCF11, PCF11, cleavage and polyadenylation factor subunit, [Score=85.1, Expect=5e-16]} {Mouse: ENSMUSG00000041328, Pcf11, PCF11 cleavage and polyadenylation factor subunit, [Score=89.7, Expect=1e-17]} {Dmel: FBgn0264962, Pcf11, Protein 1 of cleavage and polyadenylation factor 1, [Score=66.2, Expect=1e-10]} {Celegans: WBGene00020092, pcf-11, Polyadenylation and cleavage factor homolog 11, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_3280_0_1, dd_Smed_v6_3280_0_1, [Score=92.8, Expect=4e-19]} {RNA1509_14664} {RNA1310_4848.1} {RNA815_5846}
55. MligTC455_06145 12 0.25 Mlig455_037110

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_037110 {REF} {Length: 597} {RNA1310_92025} {RNA815_48334}
56. MligTC455_40137 98 2.05 Mlig455_060068

Neo: -

Age: -

Region-enriched R2: 4.909/0.02205
Region-enriched R3: 3.123/0.04741

 IDNK 0.954 - - - 0.954 - - Mlig455_060068 {REF} {Length: 2173} {TRANSSPLICED} {Pfam: Shikimate kinase [PF01202.24, score=36.3]; AAA domain [PF13671.8, score=30.7]; AAA domain [PF13238.8, score=26.4]; AAA domain [PF13521.8, score=24.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.5]; AAA domain [PF13207.8, score=20.8]} {Human: ENSG00000148057, IDNK, IDNK, gluconokinase, [RH, Score=126, Expect=2e-36]} {Mouse: ENSMUSG00000050002, Idnk, idnK gluconokinase homolog (E. coli), [RH, Score=132, Expect=3e-39]} {Celegans: WBGene00017818, F26D11.1, Gluconokinase, [RH, Score=127, Expect=2e-37]} {Smed: dd_Smed_v6_14936_0_1, dd_Smed_v6_14936_0_1, [RH, Score=108, Expect=2e-30]} {RNA1509_45489, RNA1509_48460} {RNA1310_24189, RNA1509_45489} {RNA1509_45489, RNA815_32058}
57. MligTC455_43932 60 1.25 Mlig455_005368, Mlig455_005496

Neo: -

Age: -

Region-enriched R3: 3.738/0.03222

Regeneration-upregulated R2: 5.555

Regeneration-enriched R2: 5.555

 CDA 0.954 - - - 0.954 - -

Mlig455_005368 {REF} {Length: 2584} {Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region [PF00383.25, score=51.5]; Cytidine and deoxycytidylate deaminase zinc-binding region [PF08211.14, score=41.0]} {Human: ENSG00000158825, CDA, cytidine deaminase, [Score=99.0, Expect=3e-26]} {Mouse: ENSMUSG00000028755, Cda, cytidine deaminase, [RH, Score=107, Expect=1e-29]} {Dmel: FBgn0032003, CG8349, [Score=90.9, Expect=3e-22]} {Celegans: WBGene00000391, cdd-1, Cytidine deaminase, [Score=98.2, Expect=4e-26]} {Smed: dd_Smed_v6_3308_0_1, dd_Smed_v6_3308_0_1, [Score=84.0, Expect=5e-21]} {RNA1509_38090} {RNA1310_37061} {RNA815_27264}

Mlig455_005496 {REF} {Length: 569} {Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region [PF00383.25, score=37.0]; Cytidine and deoxycytidylate deaminase zinc-binding region [PF08211.14, score=24.3]} {Human: ENSG00000158825, CDA, cytidine deaminase, [Score=63.2, Expect=8e-13]} {Mouse: ENSMUSG00000028755, Cda, cytidine deaminase, [Score=65.9, Expect=5e-14]} {Dmel: FBgn0032001, CG8360, [Score=60.5, Expect=5e-12]} {Celegans: WBGene00000392, cdd-2, Cytidine deaminase, [Score=73.2, Expect=6e-17]} {Smed: dd_Smed_v6_3308_0_1, dd_Smed_v6_3308_0_1, [Score=60.1, Expect=3e-12]} {RNA1310_37061} {RNA815_27264}
58. MligTC455_35209 5 0.1 Mlig455_066717

Neo: -

Age: -

 0.953 - - - 0.953 - - Mlig455_066717 {REF} {Length: 677} {NoTransDecoderORF} {RNA1310_60951} {RNA815_57567}
59. MligTC455_42720 246 5.13 Mlig455_024695, Mlig455_024719

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.393

 CHRNA3 0.953 - - - 0.953 - -

Mlig455_024695 {REF} {Length: 2853} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=153.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=71.5]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=188, Expect=7e-54]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=186, Expect=3e-53]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=187, Expect=8e-54]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=187, Expect=1e-53]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=185, Expect=2e-53]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=179, Expect=9e-51]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=194, Expect=4e-56]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=179, Expect=2e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=314, Expect=2e-103]} {RNA1509_30530} {RNA1310_16567} {RNA815_2979.1}

Mlig455_024719 {REF} {Length: 3783} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=153.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=80.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=192, Expect=8e-55]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=190, Expect=3e-54]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=193, Expect=2e-55]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=192, Expect=6e-55]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=187, Expect=1e-53]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=187, Expect=2e-53]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=196, Expect=6e-56]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=179, Expect=5e-50]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=316, Expect=1e-103]} {RNA1509_30530} {RNA1310_16567, RNA1509_30530} {RNA1509_30530, RNA815_2979.1}
60. MligTC455_07183 20 0.42 Mlig455_016038

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_016038 {REF} {Length: 1009} {NoTransDecoderORF} {RNA1509_4618} {RNA1310_131197} {RNA815_9866.2}
61. MligTC455_16976 171 3.56 Mlig455_017177, Mlig455_048126

Neo: -

Age: Down-Up-Up

Region-enriched R6: 3.158/0.04713

 MNX1 0.952 - - 0.952 - - -

Mlig455_017177 {REF} {Length: 2306} {Pfam: Homeodomain [PF00046.31, score=77.4]} {Human: ENSG00000130675, MNX1, motor neuron and pancreas homeobox 1, [RH, Score=137, Expect=5e-37]} {Mouse: ENSMUSG00000001566, Mnx1, motor neuron and pancreas homeobox 1, [RH, Score=137, Expect=5e-37]} {Dmel: FBgn0041156, exex, extra-extra, [RH, Score=135, Expect=8e-36]} {Celegans: WBGene00000436, ceh-12, Homeobox protein ceh-12, [RH, Score=96.3, Expect=5e-24]} {Smed: dd_Smed_v6_33575_0_2, dd_Smed_v6_33575_0_2, [RH, Score=112, Expect=4e-30]} {RNA1509_29357} {RNA1310_34922} {RNA815_24844}

Mlig455_048126 {REF} {Length: 1841} {Pfam: Homeodomain [PF00046.31, score=77.4]} {Human: ENSG00000130675, MNX1, motor neuron and pancreas homeobox 1, [RH, Score=137, Expect=5e-37]} {Mouse: ENSMUSG00000001566, Mnx1, motor neuron and pancreas homeobox 1, [RH, Score=137, Expect=5e-37]} {Dmel: FBgn0041156, exex, extra-extra, [RH, Score=135, Expect=8e-36]} {Celegans: WBGene00000436, ceh-12, Homeobox protein ceh-12, [RH, Score=96.3, Expect=5e-24]} {Smed: dd_Smed_v6_33575_0_2, dd_Smed_v6_33575_0_2, [RH, Score=112, Expect=4e-30]} {RNA1509_29357} {RNA1310_58426.1} {RNA815_24844}
62. MligTC455_27645 10 0.21 Mlig455_036877

Neo: -

Age: -

 SON 0.951 - - - 0.951 - - Mlig455_036877 {REF} {Length: 2474} {Pfam: Lipoprotein [PF01441.21, score=36.8]} {Human: ENSG00000159140, SON, SON DNA binding protein, [Score=72.0, Expect=2e-14]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=72.0, Expect=1e-14]} {RNA1509_35809} {RNA1310_10774} {RNA815_39659}
63. MligTC455_28747 31 0.65 Mlig455_008284

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_008284 {REF} {Length: 1810} {Pfam: Phospholipase A2-like domain [PF08398.12, score=52.0]} {Smed: dd_Smed_v6_61850_0_1, dd_Smed_v6_61850_0_1, [RH, Score=47.4, Expect=2e-07]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
64. MligTC455_50754 22 0.45 Mlig455_000415

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_000415 {REF} {Length: 296} {NoTransDecoderORF} {RNA1310_121177}
65. MligTC455_09273 12 0.24 Mlig455_018191

Neo: Irradiation

Age: logFC(26M/2M)=0.565

 ZFYVE21 0.95 - - - - - 0.950 Mlig455_018191 {REF} {Length: 1101} {TRANSSPLICED} {Pfam: Zinc finger FYVE domain-containing protein 21 C-terminus [PF16696.7, score=56.1]; FYVE zinc finger [PF01363.23, score=47.9]} {Human: ENSG00000100711, ZFYVE21, zinc finger FYVE-type containing 21, [RH, Score=135, Expect=1e-38]} {Mouse: ENSMUSG00000021286, Zfyve21, zinc finger, FYVE domain containing 21, [RH, Score=139, Expect=2e-40]} {Dmel: FBgn0039492, CG6051, [Score=57.0, Expect=3e-09]} {Celegans: WBGene00000101, aka-1, A Kinase Anchor protein; A kinase anchor protein, [Score=62.0, Expect=7e-11]} {Smed: dd_Smed_v6_3398_0_2, dd_Smed_v6_3398_0_2, [Score=65.1, Expect=5e-12]} {RNA1509_20281} {RNA1310_27323} {RNA815_14289}
66. MligTC455_27961 161 3.36 Mlig455_033788

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 2.381/0.02589

 MYO18A 0.95 - - 0.950 - - - Mlig455_033788 {REF} {Length: 7335} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=304.4]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=21.1]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=872, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=866, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=877, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=362, Expect=3e-101]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=798, Expect=0.0]} {RNA1509_9265} {RNA1310_390, RNA1509_9265} {RNA1509_9265, RNA815_386}
67. MligTC455_29072 205 4.27 Mlig455_062694, Mlig455_070932

Neo: -

Age: logFC(26M/2M)=0.419

 0.95 - - - 0.950 - -

Mlig455_062694 {REF} {Length: 2790} {RNA1509_35450} {RNA1310_12556.2} {RNA815_5170.1}

Mlig455_070932 {REF} {Length: 2232} {RNA1509_50625} {RNA1310_10194, RNA1509_50625} {RNA1509_50625, RNA815_5170.1}
68. MligTC455_44342 238 4.95 Mlig455_028558, Mlig455_064747

Neo: -

Age: -

 SENP8 0.95 - - - 0.950 - -

Mlig455_028558 {REF} {Length: 1322} {TRANSSPLICED} {Pfam: Ulp1 protease family, C-terminal catalytic domain [PF02902.21, score=34.9]} {Human: ENSG00000166192, SENP8, SUMO peptidase family member, NEDD8 specific, [RH, Score=78.2, Expect=5e-17]} {Mouse: ENSMUSG00000051705, Senp8, SUMO/sentrin specific peptidase 8, [RH, Score=75.5, Expect=4e-16]} {Dmel: FBgn0033716, Den1, Deneddylase 1, [RH, Score=70.5, Expect=3e-14]} {Smed: dd_Smed_v6_10711_0_1, dd_Smed_v6_10711_0_1, [RH, Score=71.6, Expect=4e-15]} {RNA1509_41235} {RNA1310_35410} {RNA815_32992}

Mlig455_064747 {REF} {Length: 1237} {TRANSSPLICED} {Pfam: Ulp1 protease family, C-terminal catalytic domain [PF02902.21, score=35.5]} {Human: ENSG00000166192, SENP8, SUMO peptidase family member, NEDD8 specific, [RH, Score=78.2, Expect=5e-17]} {Mouse: ENSMUSG00000051705, Senp8, SUMO/sentrin specific peptidase 8, [RH, Score=75.5, Expect=4e-16]} {Dmel: FBgn0033716, Den1, Deneddylase 1, [RH, Score=70.5, Expect=3e-14]} {Smed: dd_Smed_v6_10711_0_1, dd_Smed_v6_10711_0_1, [RH, Score=71.6, Expect=4e-15]} {RNA1509_41235} {RNA1310_35410, RNA1509_41235} {RNA1509_41235, RNA815_32992}
69. MligTC455_50165 54 1.12 Mlig455_007945, Mlig455_008043

Neo: -

Age: -

 0.95 - - - 0.950 - -

Mlig455_007945 {REF} {Length: 969} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32205} {RNA1310_20315} {RNA815_60601}

Mlig455_008043 {REF} {Length: 969} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32205} {RNA1310_20315} {RNA815_60601}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA