Data search
Results for MligTC455_20046
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20046 | 292 | 6.08 | Mlig455_028903 | Neo: - Age: - |
WDR89 | Mlig455_028903 {REF} {Length: 1762} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=20.3]} {Human: ENSG00000140006, WDR89, WD repeat domain 89, [RH, Score=108, Expect=1e-25]} {Mouse: ENSMUSG00000045690, Wdr89, WD repeat domain 89, [RH, Score=110, Expect=1e-26]} {Dmel: FBgn0033471, CG12134, [RH, Score=76.3, Expect=8e-15]} {Smed: dd_Smed_v6_13963_0_1, dd_Smed_v6_13963_0_1, [RH, Score=65.5, Expect=8e-12]} {RNA1509_41108, RNA1509_53990} {RNA1310_19275, RNA1509_41108, RNA1509_53990} {RNA1509_41108, RNA1509_53990, RNA815_7400} |
Cumulative graph for MligTC455_20046
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.177 | 3.13 | 0.39820 | 1.00000 | |
| RegionR2 | -0.622 | 3.13 | 0.37941 | 0.77424 | |
| RegionR3 | 0.225 | 3.13 | 0.66266 | 1.00000 | |
| RegionR4 | 0.394 | 3.13 | 0.53698 | 0.85994 | |
| RegionR5 | 0.398 | 3.13 | 0.38175 | 0.73624 | |
| RegionR6 | -0.365 | 3.13 | 0.52349 | 1.00000 | |
| RegionR7 | 0.756 | 3.13 | 0.24421 | 0.87060 | |
| RegionR8 | -1.962 | 3.13 | 0.10688 | 0.60962 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.758 | 3.13 | 0.13536 | 0.87056 | |
| RegenerationR2 | 0.197 | 3.13 | 0.72964 | 0.96551 | |
| RegenerationR3 | -0.135 | 3.13 | 0.81579 | 0.98631 | |
| RegenerationR4 | -0.216 | 3.13 | 0.71929 | 0.96103 | |
| RegenerationR5 | -0.474 | 3.13 | 0.36417 | 0.77492 | |
| RegenerationR6 | 0.545 | 3.13 | 0.35775 | 0.70272 | |
| RegenerationBL | 0.094 | 3.13 | 0.91422 | 1.00000 | |
| RegenerationTP | -0.463 | 3.13 | 0.68113 | 1.00000 |
Genes with expression patterns similar to MligTC455_20046
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20046 | 292 | 6.08 | Mlig455_028903 | Neo: - Age: - |
WDR89 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028903 {REF} {Length: 1762} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=20.3]} {Human: ENSG00000140006, WDR89, WD repeat domain 89, [RH, Score=108, Expect=1e-25]} {Mouse: ENSMUSG00000045690, Wdr89, WD repeat domain 89, [RH, Score=110, Expect=1e-26]} {Dmel: FBgn0033471, CG12134, [RH, Score=76.3, Expect=8e-15]} {Smed: dd_Smed_v6_13963_0_1, dd_Smed_v6_13963_0_1, [RH, Score=65.5, Expect=8e-12]} {RNA1509_41108, RNA1509_53990} {RNA1310_19275, RNA1509_41108, RNA1509_53990} {RNA1509_41108, RNA1509_53990, RNA815_7400} |
| 2. | MligTC455_49795 | 536 | 11.16 | Mlig455_044363, Mlig455_044374 | Neo: - Age: logFC(26M/2M)=-0.403 Regeneration-upregulated BL: 3.149 Regeneration-enriched BL: 3.149 |
PDZRN4 | 1.843 | - | - | 0.951 | 0.892 | - | - | Mlig455_044363 {REF} {Length: 2406} {Pfam: PDZ domain [PF17820.3, score=62.5]; PDZ domain [PF00595.26, score=61.2]; PDZ domain [PF13180.8, score=33.2]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [RH, Score=142, Expect=6e-35]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [RH, Score=137, Expect=3e-33]} {Dmel: FBgn0024728, Slip1, [Score=78.6, Expect=7e-15]} {Celegans: WBGene00016846, C50F7.6, [RH, Score=80.9, Expect=5e-16]} {Smed: dd_Smed_v6_4699_0_1, dd_Smed_v6_4699_0_1, [RH, Score=125, Expect=2e-30]} {RNA1509_48738} {RNA1310_8814.1} {RNA815_40261} Mlig455_044374 {REF} {Length: 2315} {Pfam: PDZ domain [PF00595.26, score=47.6]; PDZ domain [PF17820.3, score=38.4]; PDZ domain [PF13180.8, score=22.2]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [RH, Score=144, Expect=8e-36]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [RH, Score=137, Expect=2e-33]} {Dmel: FBgn0024728, Slip1, [Score=78.6, Expect=8e-15]} {Celegans: WBGene00016846, C50F7.6, [RH, Score=80.1, Expect=8e-16]} {Smed: dd_Smed_v6_4699_0_1, dd_Smed_v6_4699_0_1, [RH, Score=124, Expect=3e-30]} {RNA1509_48738} {RNA1310_8814.1} {RNA815_40261} |
| 3. | MligTC455_32787 | 379 | 7.9 | Mlig455_043579 | Neo: - Age: logFC(26M/2M)=0.262 |
RCL1 | 1.775 | - | - | 0.954 | 0.821 | - | - | Mlig455_043579 {REF} {Length: 1917} {TRANSSPLICED} {Pfam: RNA 3'-terminal phosphate cyclase [PF01137.23, score=178.0]; RNA 3'-terminal phosphate cyclase (RTC), insert domain [PF05189.15, score=91.2]} {Human: ENSG00000120158, RCL1, RNA terminal phosphate cyclase like 1, [RH, Score=361, Expect=5e-123]} {Mouse: ENSMUSG00000024785, Rcl1, RNA terminal phosphate cyclase-like 1, [RH, Score=360, Expect=9e-123]} {Dmel: FBgn0020909, Rtc1, [RH, Score=310, Expect=3e-103]} {Celegans: WBGene00022852, ZK1127.5, Probable RNA 3'-terminal phosphate cyclase-like protein, [RH, Score=301, Expect=5e-100]} {Smed: dd_Smed_v6_3243_0_1, dd_Smed_v6_3243_0_1, [RH, Score=210, Expect=9e-65]} {RNA1509_29597, RNA1509_31343} {RNA1310_15123.2, RNA1509_29597, RNA1509_31343} {RNA1509_29597, RNA1509_31343, RNA815_10939} |
| 4. | MligTC455_33175 | 175 | 3.64 | Mlig455_043352 | Neo: - Age: Up-Down-Down |
PPP1R12A | 1.681 | - | - | - | - | 0.729 | 0.952 | Mlig455_043352 {REF} {Length: 6024} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=98.4]; Ankyrin repeats (3 copies) [PF12796.9, score=97.7]; Ankyrin repeats (many copies) [PF13857.8, score=85.9]; Ankyrin repeat [PF00023.32, score=70.9]; Ankyrin repeat [PF13606.8, score=62.6]; cGMP-dependent protein kinase interacting domain [PF15898.7, score=41.6]} {Human: ENSG00000058272, PPP1R12A, protein phosphatase 1 regulatory subunit 12A, [Score=264, Expect=3e-74]} {Mouse: ENSMUSG00000019907, Ppp1r12a, protein phosphatase 1, regulatory subunit 12A, [Score=263, Expect=5e-74]} {Dmel: FBgn0005536, Mbs, Myosin binding subunit, [Score=239, Expect=2e-71]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=237, Expect=1e-65]} {Smed: dd_Smed_v6_8624_0_1, dd_Smed_v6_8624_0_1, [RH, Score=234, Expect=6e-66]} {RNA1509_16757, RNA1509_39080} {RNA1310_5211.1, RNA1509_39080} {RNA1509_39080, RNA815_18256.1} |
| 5. | MligTC455_38446 | 270 | 5.61 | Mlig455_040804 | Neo: Irradiation Age: - Region-enriched R5: 1.394/0.00361 |
USP1 | 1.675 | - | - | - | 0.711 | 0.964 | - | Mlig455_040804 {REF} {Length: 12141} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=119.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=47.0]; Thyroglobulin type-1 repeat [PF00086.20, score=45.3]} {Human: ENSG00000162607, USP1, ubiquitin specific peptidase 1, [Score=77.8, Expect=3e-13]; ENSG00000152484, USP12, ubiquitin specific peptidase 12, [Score=76.6, Expect=2e-13]; ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=74.3, Expect=4e-12]} {Mouse: ENSMUSG00000028560, Usp1, ubiquitin specific peptidase 1, [Score=86.3, Expect=5e-16]} {Dmel: FBgn0039025, Usp12-46, Ubiquitin-specific protease 12/46, [Score=80.9, Expect=6e-15]} {Celegans: WBGene00011216, usp-46, Ubiquitin carboxyl-terminal hydrolase 46, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_6911_0_2, dd_Smed_v6_6911_0_2, [Score=80.9, Expect=3e-15]} {RNA1509_26776, RNA1509_40394, RNA1509_44304} {RNA1310_5651.2, RNA1509_40394, RNA1509_44304} {RNA1509_40394, RNA1509_44304, RNA815_12588} |
| 6. | MligTC455_23270 | 247 | 5.16 | Mlig455_037672 | Neo: - Age: - |
SLC13A3 | 1.67 | - | - | 0.958 | - | 0.712 | - | Mlig455_037672 {REF} {Length: 4438} {Pfam: Sodium:sulfate symporter transmembrane region [PF00939.21, score=253.7]; Citrate transporter [PF03600.18, score=92.7]; 4'-phosphopantetheinyl transferase superfamily [PF01648.22, score=55.0]} {Human: ENSG00000158296, SLC13A3, solute carrier family 13 member 3, [Score=295, Expect=2e-89]; ENSG00000007216, SLC13A2, solute carrier family 13 member 2, [Score=281, Expect=1e-83]} {Mouse: ENSMUSG00000018459, Slc13a3, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3, [Score=298, Expect=4e-90]; ENSMUSG00000001095, Slc13a2, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, [Score=296, Expect=2e-89]} {Dmel: FBgn0036816, Indy, I'm not dead yet, [Score=174, Expect=5e-46]} {Celegans: WBGene00007138, B0285.6, Uncharacterized transporter B0285.6, [Score=187, Expect=2e-50]} {Smed: dd_Smed_v6_5476_0_1, dd_Smed_v6_5476_0_1, [Score=284, Expect=1e-85]} {RNA1509_1723, RNA1509_30648, RNA1509_54785} {RNA1310_5497, RNA1509_30648, RNA1509_54785} {RNA1509_30648, RNA1509_54785, RNA815_1709} |
| 7. | MligTC455_20060 | 2538 | 52.87 | Mlig455_063008 | Neo: - Age: logFC(26M/2M)=0.327 |
AMT | 0.97 | - | - | - | - | - | 0.970 | Mlig455_063008 {REF} {Length: 1813} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=260.3]; Glycine cleavage T-protein C-terminal barrel domain [PF08669.13, score=63.7]} {Human: ENSG00000145020, AMT, aminomethyltransferase, [RH, Score=337, Expect=6e-113]} {Mouse: ENSMUSG00000032607, Amt, aminomethyltransferase, [RH, Score=341, Expect=2e-114]} {Dmel: FBgn0032287, CG6415, [RH, Score=308, Expect=9e-102]} {Celegans: WBGene00017765, gcst-1, Aminomethyltransferase, [RH, Score=298, Expect=6e-98]} {Smed: dd_Smed_v6_3994_0_1, dd_Smed_v6_3994_0_1, [RH, Score=346, Expect=1e-116]} {RNA1509_21672} {RNA1310_17248.1} {RNA815_1503.1} |
| 8. | MligTC455_43065 | 374 | 7.8 | Mlig455_063591 | Neo: - Age: - Regeneration-upregulated R5: 2.427 Regeneration-enriched R5: 2.427 |
0.967 | - | - | 0.967 | - | - | - | Mlig455_063591 {REF} {Length: 1155} {RNA1509_15467} {RNA1310_5983} {RNA815_3304} | |
| 9. | MligTC455_17282 | 910 | 18.96 | Mlig455_013069 | Neo: - Age: - Region-enriched R5: 1.392/0.00382 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_013069 {REF} {Length: 1607} {TRANSSPLICED} {Pfam: Methyltransferase small domain [PF05175.16, score=68.5]; Methyltransferase domain [PF08242.14, score=41.8]; Methyltransferase domain [PF13649.8, score=39.4]; Methyltransferase domain [PF13847.8, score=36.1]; Methyltransferase domain [PF08241.14, score=33.5]; Putative methyltransferase [PF02390.19, score=31.4]; Methyltransferase domain [PF12847.9, score=27.0]; RNA methyltransferase [PF05971.14, score=26.1]; Lysine methyltransferase [PF10294.11, score=24.4]; Methyltransferase domain [PF13489.8, score=24.3]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=23.7]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=23.4]; Conserved hypothetical protein 95 [PF03602.17, score=22.8]; Domain of unknown function (DUF2431) [PF10354.11, score=22.5]; Methyltransferase domain [PF13578.8, score=21.5]; tRNA (adenine(22)-N(1))-methyltransferase [PF04816.14, score=21.2]; Putative RNA methylase family UPF0020 [PF01170.20, score=19.8]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=19.7]} {RNA1509_4717} {RNA1310_19616, RNA1509_4717} {RNA1509_4717, RNA815_4785.2} | |
| 10. | MligTC455_45924 | 1344 | 28.01 | Mlig455_055371 | Neo: - Age: logFC(26M/2M)=0.654 Region-enriched R5: 1.027/0.00032 |
PRR9 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_055371 {REF} {Length: 2145} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.0, Expect=2e-06]} {RNA1509_16569, RNA1509_18752, RNA1509_32064, RNA1509_57342} {RNA1310_42904, RNA1509_16569, RNA1509_18752, RNA1509_32064} {RNA1509_16569, RNA1509_18752, RNA1509_32064, RNA815_19108} |
| 11. | MligTC455_52109 | 297 | 6.19 | Mlig455_069072 | Neo: - |
0.96 | - | - | 0.960 | - | - | - | Mlig455_069072 {REF} {Length: 2302} {RNA1509_46495} {RNA1310_32026} {RNA815_11216.2} | |
| 12. | MligTC455_46999 | 1066 | 22.21 | Mlig455_019051, Mlig455_055638, Mlig455_055655 | Neo: Int S/G2/M Age: - |
ABHD18 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_019051 {REF} {Length: 1989} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase domain containing 18 [PF09752.11, score=229.2]} {Human: ENSG00000164074, ABHD18, abhydrolase domain containing 18, [Score=188, Expect=3e-54]} {Mouse: ENSMUSG00000115963, Abhd18, abhydrolase domain containing 18, [Score=193, Expect=2e-56]; ENSMUSG00000037818, Abhd18, abhydrolase domain containing 18, [Score=193, Expect=2e-56]} {Dmel: FBgn0052112, CG32112, [Score=189, Expect=2e-54]} {Celegans: WBGene00008317, C54G4.7, [RH, Score=161, Expect=2e-45]} {Smed: dd_Smed_v6_10447_0_1, dd_Smed_v6_10447_0_1, [Score=224, Expect=3e-68]} {RNA1509_25668, RNA1509_9676} {RNA1310_3443.1, RNA1509_25668, RNA1509_9676} {RNA1509_25668, RNA1509_9676, RNA815_5047} Mlig455_055638 {REF} {Length: 2520} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase domain containing 18 [PF09752.11, score=263.3]} {Human: ENSG00000164074, ABHD18, abhydrolase domain containing 18, [RH, Score=222, Expect=6e-65]} {Mouse: ENSMUSG00000037818, Abhd18, abhydrolase domain containing 18, [RH, Score=227, Expect=6e-67]; ENSMUSG00000115963, Abhd18, abhydrolase domain containing 18, [RH, Score=227, Expect=6e-67]} {Dmel: FBgn0052112, CG32112, [RH, Score=215, Expect=5e-62]} {Celegans: WBGene00008317, C54G4.7, [RH, Score=162, Expect=3e-44]} {Smed: dd_Smed_v6_10447_0_1, dd_Smed_v6_10447_0_1, [RH, Score=243, Expect=7e-73]} {RNA1509_25668} {RNA1310_3443.1} {RNA815_5047} Mlig455_055655 {REF} {Length: 1909} {Pfam: Alpha/beta hydrolase domain containing 18 [PF09752.11, score=259.4]} {Human: ENSG00000164074, ABHD18, abhydrolase domain containing 18, [Score=207, Expect=4e-61]} {Mouse: ENSMUSG00000115963, Abhd18, abhydrolase domain containing 18, [Score=212, Expect=5e-63]; ENSMUSG00000037818, Abhd18, abhydrolase domain containing 18, [Score=212, Expect=5e-63]} {Dmel: FBgn0052112, CG32112, [Score=204, Expect=1e-59]} {Celegans: WBGene00008317, C54G4.7, [RH, Score=155, Expect=1e-42]} {Smed: dd_Smed_v6_10447_0_1, dd_Smed_v6_10447_0_1, [Score=221, Expect=8e-67]} {RNA1509_25668, RNA1509_31851} {RNA1310_3443.1, RNA1509_31851} {RNA1509_31851, RNA815_5047} |
| 13. | MligTC455_18938 | 434 | 9.04 | Mlig455_049977 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_049977 {REF} {Length: 1121} {NoTransDecoderORF} {RNA1509_4069} {RNA1310_31916, RNA1509_4069} {RNA1509_4069, RNA815_18917.1} | |
| 14. | MligTC455_37092 | 161 | 3.35 | Mlig455_048271 | Neo: - Age: - |
RNF34 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_048271 {REF} {Length: 2881} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=38.8]; FYVE-type zinc finger [PF02318.18, score=19.1]; Prokaryotic RING finger family 4 [PF14447.8, score=18.8]} {Human: ENSG00000170633, RNF34, ring finger protein 34, [RH, Score=139, Expect=3e-38]; ENSG00000092871, RFFL, ring finger and FYVE like domain containing E3 ubiquitin protein ligase, [RH, Score=137, Expect=7e-36]; ENSG00000267618, RAD51L3-RFFL, RAD51L3-RFFL readthrough, [RH, Score=136, Expect=3e-36]} {Mouse: ENSMUSG00000029474, Rnf34, ring finger protein 34, [RH, Score=143, Expect=6e-38]; ENSMUSG00000020696, Rffl, ring finger and FYVE like domain containing protein, [RH, Score=142, Expect=2e-37]} {Dmel: FBgn0033783, CG17019, [RH, Score=134, Expect=3e-33]} {Celegans: WBGene00017342, F10D7.5, [RH, Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_6206_0_1, dd_Smed_v6_6206_0_1, [Score=110, Expect=8e-27]} {RNA1509_13117, RNA1509_16106} {RNA1310_5737.1, RNA1509_13117} {RNA1509_13117, RNA815_6542} |
| 15. | MligTC455_50957 | 2052 | 42.74 | Mlig455_023401 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.265 Region-enriched R4: 1.351/0.00012 |
TBCB | 0.951 | - | - | - | - | - | 0.951 | Mlig455_023401 {REF} {Length: 1395} {Pfam: Ubiquitin-like domain [PF14560.8, score=97.4]; CAP-Gly domain [PF01302.27, score=85.2]} {Human: ENSG00000105254, TBCB, tubulin folding cofactor B, [RH, Score=216, Expect=8e-70]} {Mouse: ENSMUSG00000006095, Tbcb, tubulin folding cofactor B, [RH, Score=215, Expect=7e-70]} {Dmel: FBgn0034451, TBCB, tubulin-binding cofactor B, [RH, Score=168, Expect=1e-51]} {Celegans: WBGene00009987, tbcb-1, Tubulin-specific chaperone B, [RH, Score=201, Expect=8e-65]} {Smed: dd_Smed_v6_3380_0_1, dd_Smed_v6_3380_0_1, [RH, Score=248, Expect=5e-83]} {RNA1509_19197, RNA1509_26255, RNA1509_27827, RNA1509_39126, RNA1509_5864} {RNA1310_29931.1, RNA1509_19197, RNA1509_26255, RNA1509_27827, RNA1509_39126, RNA1509_5864} {RNA1509_19197, RNA1509_26255, RNA1509_27827, RNA1509_39126, RNA1509_5864, RNA815_12848.2} |
| 16. | MligTC455_35284 | 125 | 2.6 | Mlig455_066664 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_066664 {REF} {Length: 1601} {NoTransDecoderORF} |
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