TomoSeq data search

Data search

Results for MligTC455_20239

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20239

14

0.29

Mlig455_054378

Neo: -

Age: -

Mlig455_054378 {REF} {Length: 1875} {RNA1509_52273} {RNA1310_84069} {RNA815_52433}

Cumulative graph for MligTC455_20239

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.727	0.672	1.00000	1.00000
RegionR2	2.222	0.672	0.99994	1.00000
RegionR3	0.205	0.672	0.99994	1.00000
RegionR4	-2.576	0.672	0.99980	1.00000
RegionR5	-0.975	0.672	0.99986	1.00000
RegionR6	-0.443	0.672	0.99989	1.00000
RegionR7	1.098	0.672	0.99998	1.00000
RegionR8	2.194	0.672	0.99997	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.284	0.672	0.99994	1.00000
RegenerationR2	1.661	0.672	1.00000	1.00000
RegenerationR3	2.075	0.672	1.00000	1.00000
RegenerationR4	1.471	0.672	1.00000	1.00000
RegenerationR5	1.195	0.672	1.00000	1.00000
RegenerationR6	-0.844	0.672	0.99994	1.00000
RegenerationBL	-1.469	0.672	1.00000	1.00000
RegenerationTP	-1.732	0.672	0.99992	1.00000

Genes with expression patterns similar to MligTC455_20239

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20239	14	0.29	Mlig455_054378	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_054378 {REF} {Length: 1875} {RNA1509_52273} {RNA1310_84069} {RNA815_52433}
2.	MligTC455_32523	45	0.93	Mlig455_057683	Neo: - Age: Down-Down-Up	NR2E1	0.998	-	-	-	-	0.998	-	Mlig455_057683 {REF} {Length: 3117} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=84.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=46.7]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [RH, Score=201, Expect=4e-60]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [RH, Score=199, Expect=7e-60]} {Dmel: FBgn0003720, tll, tailless, [Score=165, Expect=2e-46]} {Celegans: WBGene00003657, nhr-67, Nuclear hormone receptor family member nhr-67, [Score=151, Expect=2e-41]} {Smed: dd_Smed_v6_21347_0_1, dd_Smed_v6_21347_0_1, [Score=152, Expect=3e-42]} {RNA1509_22720} {RNA1310_16022, RNA1509_22720} {RNA1509_22720, RNA815_25885}
3.	MligTC455_36567	18	0.37	Mlig455_065030	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_065030 {REF} {Length: 672}
4.	MligTC455_13571	22	0.46	Mlig455_017396	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_017396 {REF} {Length: 2929} {Pfam: Domain of unknown function (DUF4834) [PF16118.7, score=23.0]; Transmembrane protein 51 [PF15345.8, score=21.9]; RNA polymerase I-specific transcription-initiation factor [PF10214.11, score=20.8]; Ctr copper transporter family [PF04145.17, score=20.5]; ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=19.0]; Mechanosensitive ion channel inner membrane domain 1 [PF12794.9, score=17.5]} {RNA1310_13412} {RNA815_37792}
5.	MligTC455_13572	23	0.47	Mlig455_017474	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_017474 {REF} {Length: 2992} {RNA1310_13412} {RNA815_21127}
6.	MligTC455_28791	38	0.8	Mlig455_069648	Neo: - Age: -	ANKRD50	0.97	-	-	-	-	0.970	-	Mlig455_069648 {REF} {Length: 4120} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=191.3]; Ankyrin repeats (many copies) [PF13637.8, score=125.2]; Ankyrin repeat [PF13606.8, score=90.6]; Ankyrin repeats (many copies) [PF13857.8, score=81.6]; Ankyrin repeat [PF00023.32, score=46.1]; Mab-21 protein [PF03281.16, score=42.7]; ABC transporter transmembrane region [PF13748.8, score=32.5]; Protein of unknown function (DUF4242) [PF14026.8, score=24.4]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=116, Expect=8e-26]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=85.1, Expect=4e-16]} {Celegans: WBGene00012124, T28D6.4, [Score=83.6, Expect=5e-16]} {Smed: dd_Smed_v6_5303_0_1, dd_Smed_v6_5303_0_1, [Score=93.2, Expect=4e-19]} {RNA1509_25573, RNA1509_25948, RNA1509_30252, RNA1509_33632, RNA1509_45207} {RNA1310_4721, RNA1509_25573, RNA1509_30252, RNA1509_33632, RNA1509_45207} {RNA1509_25573, RNA1509_30252, RNA1509_33632, RNA1509_45207, RNA815_5358.1}
7.	MligTC455_43407	35	0.73	Mlig455_021194	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.275	TRAF5	0.97	-	-	-	-	0.970	-	Mlig455_021194 {REF} {Length: 2878} {Pfam: TRAF-type zinc finger [PF02176.20, score=48.0]; Seven in absentia protein family [PF03145.18, score=20.5]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=200, Expect=6e-56]} {Mouse: ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=101, Expect=2e-22]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=93.2, Expect=6e-20]} {Smed: dd_Smed_v6_3837_0_1, dd_Smed_v6_3837_0_1, [Score=113, Expect=1e-26]} {RNA1509_32223} {RNA1310_24731} {RNA815_3096.1}
8.	MligTC455_29610	243	5.06	Mlig455_031720	Neo: - Age: Up-Down-Up	RBM12	0.961	-	-	-	-	0.961	-	Mlig455_031720 {REF} {Length: 8472} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.3]} {Human: ENSG00000244462, RBM12, RNA binding motif protein 12, [RH, Score=99.8, Expect=5e-22]} {Mouse: ENSMUSG00000089824, Rbm12, RNA binding motif protein 12, [RH, Score=97.8, Expect=1e-21]} {Dmel: FBgn0035235, CG7879, [Score=116, Expect=8e-26]} {Celegans: WBGene00013703, Y106G6D.7, [Score=97.4, Expect=5e-20]} {Smed: dd_Smed_v6_5908_0_1, dd_Smed_v6_5908_0_1, [RH, Score=108, Expect=8e-24]} {RNA1509_8705} {RNA1310_1058.1, RNA1509_8705} {RNA1509_8705, RNA815_1326.1}
9.	MligTC455_23974	18	0.38	Mlig455_022922, Mlig455_055203	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.700		0.958	-	-	-	-	0.958	-	Mlig455_022922 {REF} {Length: 1992} {RNA1509_39040} {RNA1310_886.1, RNA1509_39040} {RNA1509_39040, RNA815_4579} Mlig455_055203 {REF} {Length: 1177} {RNA1509_39040} {RNA1310_24363} {RNA815_4579}
10.	MligTC455_11904	34	0.71	Mlig455_052381, Mlig455_064133	Neo: - Age: Up-Down-Up		0.957	-	-	-	-	0.957	-	Mlig455_052381 {REF} {Length: 6581} {RNA1509_49721} {RNA1310_18098} {RNA815_61989} Mlig455_064133 {REF} {Length: 5051} {RNA1509_49721} {RNA1310_18098} {RNA815_61989}
11.	MligTC455_18681	61	1.27	Mlig455_069927	Neo: - Age: Down-Up-Down		0.954	-	-	-	-	0.954	-	Mlig455_069927 {REF} {Length: 1526} {RNA1509_58272} {RNA1310_47741} {RNA815_23874}
12.	MligTC455_32524	70	1.46	Mlig455_059988	Neo: - Age: -	NR2E1	0.952	-	-	-	-	0.952	-	Mlig455_059988 {REF} {Length: 3126} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=85.7]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=43.4]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [RH, Score=197, Expect=1e-58]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [RH, Score=196, Expect=2e-58]} {Dmel: FBgn0003651, svp, seven up, [Score=162, Expect=1e-44]} {Celegans: WBGene00003657, nhr-67, Nuclear hormone receptor family member nhr-67, [Score=142, Expect=3e-38]} {Smed: dd_Smed_v6_21347_0_1, dd_Smed_v6_21347_0_1, [Score=147, Expect=3e-40]} {RNA1509_22720} {RNA1310_16022} {RNA815_25885}

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