M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_13572

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13572 23 0.47 Mlig455_017474

Neo: -

Age: -

 Mlig455_017474 {REF} {Length: 2992} {RNA1310_13412} {RNA815_21127}

Cumulative graph for MligTC455_13572

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.005 0.985 0.99958 1.00000
RegionR2 3.006 0.985 0.11701 0.42370
RegionR3 2.864 0.985 0.05874 0.42705
RegionR4 0.165 0.985 0.73005 1.00000
RegionR5 1.662 0.985 0.23235 0.53973
RegionR6 -1.025 0.985 0.99971 1.00000
RegionR7 -1.609 0.985 0.99973 1.00000
RegionR8 -2.058 0.985 0.99969 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.467 0.985 1.00000 1.00000
RegenerationR2 0.055 0.985 0.99871 1.00000
RegenerationR3 -0.174 0.985 0.95229 1.00000
RegenerationR4 1.697 0.985 0.24154 0.69044
RegenerationR5 0.364 0.985 0.69013 0.94791
RegenerationR6 1.175 0.985 0.40901 0.74333
RegenerationBL -0.53 0.985 1.00000 1.00000
RegenerationTP -0.17 0.985 0.99998 1.00000


Genes with expression patterns similar to MligTC455_13572

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13572 23 0.47 Mlig455_017474

Neo: -

Age: -

 3 - - 1.000 1.000 1.000 - Mlig455_017474 {REF} {Length: 2992} {RNA1310_13412} {RNA815_21127}
2. MligTC455_13571 22 0.46 Mlig455_017396

Neo: -

Age: -

 2.935 - - 0.993 0.965 0.977 - Mlig455_017396 {REF} {Length: 2929} {Pfam: Domain of unknown function (DUF4834) [PF16118.7, score=23.0]; Transmembrane protein 51 [PF15345.8, score=21.9]; RNA polymerase I-specific transcription-initiation factor [PF10214.11, score=20.8]; Ctr copper transporter family [PF04145.17, score=20.5]; ARC105 or Med15 subunit of Mediator complex non-fungal [PF09606.12, score=19.0]; Mechanosensitive ion channel inner membrane domain 1 [PF12794.9, score=17.5]} {RNA1310_13412} {RNA815_37792}
3. MligTC455_05913 13 0.28 Mlig455_064325, Mlig455_064355

Neo: -

Age: -

 2.511 - - 0.972 0.770 0.769 -

Mlig455_064325 {REF} {Length: 2163} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=137.7]} {RNA1509_19020} {RNA1310_13852} {RNA815_7058}

Mlig455_064355 {REF} {Length: 470} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=33.1]} {RNA1509_19020} {RNA1310_13852} {RNA815_7058}
4. MligTC455_17976 81 1.68 Mlig455_002059

Neo: -

Age: -

 1.806 - - 0.992 - 0.814 - Mlig455_002059 {REF} {Length: 730} {RNA1310_56725} {RNA815_29666}
5. MligTC455_32278 31 0.65 Mlig455_041080

Neo: -

Age: Up-Down-Down

 USH2A 1.773 - - 0.987 - 0.786 - Mlig455_041080 {REF} {Length: 15804} {Pfam: Fibronectin type III domain [PF00041.23, score=464.0]; Laminin EGF domain [PF00053.26, score=197.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=110.9]; Laminin G domain [PF02210.26, score=79.7]; Laminin G domain [PF00054.25, score=43.4]; Fibronectin type III domain [PF16893.7, score=43.3]; Chitinase A, N-terminal domain [PF08329.12, score=22.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=20.5]} {Human: ENSG00000042781, USH2A, usherin, [Score=1148, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1111, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=265, Expect=7e-70]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=267, Expect=1e-70]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=229, Expect=2e-59]} {RNA1509_43154} {RNA1310_15599} {RNA815_35868}
6. MligTC455_14145 21 0.44 Mlig455_019525

Neo: -

Age: -

 1.731 - - 0.975 - 0.756 - Mlig455_019525 {REF} {Length: 589} {RNA1310_32376.1} {RNA815_45036}
7. MligTC455_34332 28 0.59 Mlig455_005058

Neo: -

Age: -

 NKX3-2 1.725 - - 0.978 0.747 - - Mlig455_005058 {REF} {Length: 1884} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=118, Expect=4e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=118, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=7e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=90.9, Expect=7e-20]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
8. MligTC455_34333 29 0.59 Mlig455_005256

Neo: -

Age: -

 NKX3-2 1.725 - - 0.978 0.747 - - Mlig455_005256 {REF} {Length: 1971} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=119, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=5e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
9. MligTC455_37837 39 0.81 Mlig455_060764

Neo: -

Age: -

 1.694 - - 0.972 0.722 - - Mlig455_060764 {REF} {Length: 489} {NoTransDecoderORF} {RNA1310_49408} {RNA815_26583}
10. MligTC455_49469 65 1.35 Mlig455_016236

Neo: -

Age: -

Region-enriched R3: 5.774/0.00000

 B3GNT5 1.693 - - 0.962 0.731 - - Mlig455_016236 {REF} {Length: 2696} {Pfam: Galactosyltransferase [PF01762.23, score=91.0]} {Human: ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [Score=86.3, Expect=3e-18]; ENSMUSG00000043300, B3galnt1, UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1, [Score=83.2, Expect=4e-17]} {Dmel: FBgn0000221, brn, brainiac, [Score=77.0, Expect=3e-15]} {Celegans: WBGene00044630, bus-17, Hexosyltransferase, [RH, Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_13702_0_1, dd_Smed_v6_13702_0_1, [RH, Score=171, Expect=5e-49]} {RNA1509_54587, RNA1509_56943} {RNA1310_18654, RNA1509_54587, RNA1509_56943} {RNA1509_54587, RNA1509_56943, RNA815_8083}
11. MligTC455_36995 217 4.52 Mlig455_040359

Neo: -

Age: Down-Up-Up

Region-enriched R2: 6.534/0.00155
Region-enriched R3: 5.197/0.00130

 1.679 - - 0.970 0.709 - - Mlig455_040359 {REF} {Length: 759} {RNA1509_59636} {RNA1310_6145.1, RNA1509_59636} {RNA1509_59636, RNA815_27612}
12. MligTC455_36996 285 5.93 Mlig455_050334

Neo: -

Age: -

Region-enriched R2: 6.300/0.00168
Region-enriched R3: 4.887/0.00251

 CACNA1C 1.679 - - 0.960 0.719 - - Mlig455_050334 {REF} {Length: 4859} {Pfam: Ion transport protein [PF00520.33, score=618.4]; FAM176 family [PF14851.8, score=22.7]; Polycystin cation channel [PF08016.14, score=21.8]} {Human: ENSG00000285479, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1126, Expect=0.0]; ENSG00000151067, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1126, Expect=0.0]; ENSG00000081248, CACNA1S, calcium voltage-gated channel subunit alpha1 S, [Score=1110, Expect=0.0]; ENSG00000157388, CACNA1D, calcium voltage-gated channel subunit alpha1 D, [Score=1073, Expect=0.0]} {Mouse: ENSMUSG00000051331, Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit, [Score=1125, Expect=0.0]; ENSMUSG00000026407, Cacna1s, calcium channel, voltage-dependent, L type, alpha 1S subunit, [Score=1100, Expect=0.0]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=1219, Expect=0.0]} {Celegans: WBGene00006742, unc-2, High voltage activated calcium channel alpha-1 subunit, [Score=785, Expect=0.0]} {Smed: dd_Smed_v6_8899_0_18, dd_Smed_v6_8899_0_18, [Score=1230, Expect=0.0]} {RNA1509_10231} {RNA1310_369.1, RNA1509_10231} {RNA1509_10231, RNA815_298.1}
13. MligTC455_52122 1435 29.9 Mlig455_035226, Mlig455_035273

Neo: -

Age: -

Region-enriched R3: 3.936/0.00000
Region-enriched R2: 3.858/0.00018

 1.677 - - 0.973 0.704 - -

Mlig455_035226 {REF} {Length: 725} {TRANSSPLICED} {RNA1509_39421} {RNA1310_8553.2, RNA1509_39421} {RNA1509_39421, RNA815_2974.1}

Mlig455_035273 {REF} {Length: 1422} {RNA1509_24257, RNA1509_39421} {RNA1310_8553.2, RNA1509_24257} {RNA1509_24257, RNA815_2974.1}
14. MligTC455_18746 23 0.47 Mlig455_024831

Neo: -

Age: -

Region-enriched R4: 8.220/0.00001

Regeneration-depleted R4: -6.352
Regeneration-depleted R3: -3.721
Regeneration-depleted R2: -1.825

 1.663 - - 0.953 0.710 - - Mlig455_024831 {REF} {Length: 1230} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_9302} {RNA1310_672.1} {RNA815_6919}
15. MligTC455_37391 23 0.47 Mlig455_028202, Mlig455_039425, Mlig455_045479, Mlig455_056344

Neo: -

Age: -

 0.989 - - 0.989 - - -

Mlig455_028202 {REF} {Length: 764} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=30.5]} {RNA1310_17986} {RNA815_61383}

Mlig455_039425 {REF} {Length: 905} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=30.5]} {RNA1310_17986} {RNA815_61383}

Mlig455_045479 {REF} {Length: 764} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=30.5]} {RNA1310_17986} {RNA815_61383}

Mlig455_056344 {REF} {Length: 707} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=30.6]} {RNA1310_17986} {RNA815_61383}
16. MligTC455_13098 19 0.4 Mlig455_020992

Neo: -

Age: -

 C1GALT1 0.987 - - 0.987 - - - Mlig455_020992 {REF} {Length: 1108} {Pfam: Galactosyltransferase [PF01762.23, score=27.6]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=160, Expect=3e-46]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=162, Expect=1e-46]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=138, Expect=8e-38]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=165, Expect=4e-48]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=185, Expect=3e-56]} {RNA1310_125941}
17. MligTC455_19966 28 0.59 Mlig455_007419

Neo: -

Age: Up-Down-Down

 0.987 - - 0.987 - - - Mlig455_007419 {REF} {Length: 1601} {NoTransDecoderORF} {RNA1509_51785} {RNA1310_77392} {RNA815_14770.1}
18. MligTC455_27149 162 3.38 Mlig455_010166

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-2.585

Region-enriched R3: 5.671/0.00012
Region-enriched R2: 4.829/0.04858

 0.987 - - 0.987 - - - Mlig455_010166 {REF} {Length: 595} {RNA1509_40054} {RNA1310_45578.1} {RNA815_7257.5}
19. MligTC455_35643 13 0.28 Mlig455_034753

Neo: -

Age: -

 NPY4R2 0.987 - - 0.987 - - - Mlig455_034753 {REF} {Length: 2924} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=87.0]} {Human: ENSG00000264717, NPY4R2, neuropeptide Y receptor Y4-2, [Score=99.0, Expect=3e-22]; ENSG00000204174, NPY4R, neuropeptide Y receptor Y4, [Score=95.9, Expect=4e-21]} {Mouse: ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=112, Expect=5e-27]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=128, Expect=2e-32]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=125, Expect=1e-31]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [Score=194, Expect=1e-56]} {RNA1310_122559.1}
20. MligTC455_37338 40 0.84 Mlig455_035280

Neo: -

Age: -

 0.987 - - 0.987 - - - Mlig455_035280 {REF} {Length: 2442} {RNA1310_17149} {RNA815_15957}
21. MligTC455_16509 21 0.44 Mlig455_017525, Mlig455_019044

Neo: -

Age: Up-Down-Up

 0.984 - - 0.984 - - -

Mlig455_017525 {REF} {Length: 792} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=88.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=57.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=43.3]; Integrase core domain [PF00665.28, score=27.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=22.3]; Aspartyl protease [PF13650.8, score=22.1]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=229, Expect=1e-64]} {RNA1509_46846} {RNA1310_8296} {RNA815_40201}

Mlig455_019044 {REF} {Length: 3591} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=88.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=57.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=43.3]; Integrase core domain [PF00665.28, score=27.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=22.3]; Aspartyl protease [PF13650.8, score=22.1]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=229, Expect=1e-64]} {RNA1509_46846} {RNA1310_8296, RNA1509_46846} {RNA1509_46846, RNA815_22609}
22. MligTC455_20008 45 0.95 Mlig455_016377

Neo: -

Age: -

 0.98 - - 0.980 - - - Mlig455_016377 {REF} {Length: 2038} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=148.2]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=52.4, Expect=4e-07]} {RNA1310_87656}
23. MligTC455_43193 359 7.49 Mlig455_033211

Neo: -

Age: -

 0.98 - - 0.980 - - - Mlig455_033211 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_121983}
24. MligTC455_18799 47 0.98 Mlig455_031256, Mlig455_031302

Neo: -

Age: -

 0.979 - - 0.979 - - -

Mlig455_031256 {REF} {Length: 1098}

Mlig455_031302 {REF} {Length: 1102}
25. MligTC455_32523 45 0.93 Mlig455_057683

Neo: -

Age: Down-Down-Up

 NR2E1 0.978 - - - - 0.978 - Mlig455_057683 {REF} {Length: 3117} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=84.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=46.7]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [RH, Score=201, Expect=4e-60]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [RH, Score=199, Expect=7e-60]} {Dmel: FBgn0003720, tll, tailless, [Score=165, Expect=2e-46]} {Celegans: WBGene00003657, nhr-67, Nuclear hormone receptor family member nhr-67, [Score=151, Expect=2e-41]} {Smed: dd_Smed_v6_21347_0_1, dd_Smed_v6_21347_0_1, [Score=152, Expect=3e-42]} {RNA1509_22720} {RNA1310_16022, RNA1509_22720} {RNA1509_22720, RNA815_25885}
26. MligTC455_29464 25 0.53 Mlig455_021892

Neo: -

Age: -

 SDCCAG8 0.976 - - 0.976 - - - Mlig455_021892 {REF} {Length: 3036} {Pfam: Centrosomal colon cancer autoantigen protein family [PF15964.7, score=164.7]} {Human: ENSG00000276111, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]; ENSG00000054282, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000026504, Sdccag8, serologically defined colon cancer antigen 8, [RH, Score=109, Expect=4e-24]} {Dmel: FBgn0266566, CG45105, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_9295_0_2, dd_Smed_v6_9295_0_2, [RH, Score=87.8, Expect=7e-18]} {RNA1509_42574} {RNA1310_5942.1} {RNA815_9353.1}
27. MligTC455_31767 25 0.51 Mlig455_006259, Mlig455_006321, Mlig455_061205

Neo: -

Age: -

 0.973 - - 0.973 - - -

Mlig455_006259 {REF} {Length: 247} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}

Mlig455_006321 {REF} {Length: 124} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}

Mlig455_061205 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}
28. MligTC455_08017 5 0.11 Mlig455_027000

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_027000 {REF} {Length: 1360} {TRANSSPLICED} {RNA1310_47153} {RNA815_22265}
29. MligTC455_09290 23 0.48 Mlig455_057456

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_057456 {REF} {Length: 350} {NoTransDecoderORF} {RNA1310_95940}
30. MligTC455_13832 178 3.71 Mlig455_065431

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_065431 {REF} {Length: 1865} {NoTransDecoderORF} {RNA1509_9010} {RNA1310_38702, RNA1509_9010} {RNA1509_9010, RNA815_4929.1}
31. MligTC455_15805 9 0.19 Mlig455_023117

Neo: -

Age: -

 KCNK18 0.972 - - 0.972 - - - Mlig455_023117 {REF} {Length: 1703} {Pfam: Ion channel [PF07885.18, score=119.1]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=101, Expect=6e-23]; ENSG00000100433, KCNK10, potassium two pore domain channel subfamily K member 10, [Score=96.3, Expect=1e-20]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=103, Expect=7e-24]} {Dmel: FBgn0085425, CG34396, [Score=155, Expect=3e-40]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=155, Expect=1e-42]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=338, Expect=1e-112]} {RNA1310_118169}
32. MligTC455_24089 12 0.25 Mlig455_018092

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_018092 {REF} {Length: 2904} {RNA1509_43825} {RNA1310_93759} {RNA815_63754}
33. MligTC455_37917 34 0.71 Mlig455_070471

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_070471 {REF} {Length: 638} {NoTransDecoderORF} {RNA1310_105024}
34. MligTC455_20239 14 0.29 Mlig455_054378

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_054378 {REF} {Length: 1875} {RNA1509_52273} {RNA1310_84069} {RNA815_52433}
35. MligTC455_49929 76 1.59 Mlig455_001249, Mlig455_001253

Neo: -

Age: Down-Up-Up

 0.971 - - 0.971 - - -

Mlig455_001249 {REF} {Length: 984} {RNA1310_33799.1} {RNA815_47109}

Mlig455_001253 {REF} {Length: 1260} {RNA1310_33799.1} {RNA815_45980}
36. MligTC455_03236 61 1.26 Mlig455_038880

Neo: -

Age: -

 0.97 - - - 0.970 - - Mlig455_038880 {REF} {Length: 845} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=21.6]} {RNA1509_23775} {RNA1310_90963} {RNA815_27579}
37. MligTC455_49470 54 1.13 Mlig455_054252

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.395

Region-enriched R3: 5.217/0.00090

 B3GNT5 0.969 - - 0.969 - - - Mlig455_054252 {REF} {Length: 3081} {Pfam: Galactosyltransferase [PF01762.23, score=90.8]} {Human: ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=99.4, Expect=6e-22]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [Score=89.0, Expect=6e-19]} {Dmel: FBgn0000221, brn, brainiac, [Score=77.4, Expect=3e-15]} {Celegans: WBGene00044630, bus-17, Hexosyltransferase, [RH, Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_13702_0_1, dd_Smed_v6_13702_0_1, [RH, Score=170, Expect=1e-47]} {RNA1509_54587} {RNA1310_18654} {RNA815_8083}
38. MligTC455_55615 9 0.18 Mlig455_002937

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_002937 {REF} {Length: 373} {NoTransDecoderORF}
39. MligTC455_11015 19 0.4 Mlig455_010464

Neo: -

Age: Up-Down-Up

 0.964 - - 0.964 - - - Mlig455_010464 {REF} {Length: 1551} {RNA1310_22199.1} {RNA815_10412}
40. MligTC455_28894 69 1.44 Mlig455_012699, Mlig455_033012

Neo: -

Age: -

 NPEPL1 0.963 - - - 0.963 - -

Mlig455_012699 {REF} {Length: 3546} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=200.7]; DNA polymerase type B, organellar and viral [PF03175.15, score=34.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=5e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=2e-15]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=5e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.0, Expect=2e-15]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=352, Expect=4e-110]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=356, Expect=2e-111]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=411, Expect=1e-132]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}

Mlig455_033012 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=203.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=1e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=7e-16]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=1e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.4, Expect=3e-16]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=354, Expect=4e-117]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=350, Expect=1e-115]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=396, Expect=2e-133]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}
41. MligTC455_43407 35 0.73 Mlig455_021194

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.275

 TRAF5 0.962 - - - - 0.962 - Mlig455_021194 {REF} {Length: 2878} {Pfam: TRAF-type zinc finger [PF02176.20, score=48.0]; Seven in absentia protein family [PF03145.18, score=20.5]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=200, Expect=6e-56]} {Mouse: ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=101, Expect=2e-22]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=93.2, Expect=6e-20]} {Smed: dd_Smed_v6_3837_0_1, dd_Smed_v6_3837_0_1, [Score=113, Expect=1e-26]} {RNA1509_32223} {RNA1310_24731} {RNA815_3096.1}
42. MligTC455_52917 35 0.74 Mlig455_038643

Neo: -

Age: -

 0.962 - - 0.962 - - - Mlig455_038643 {REF} {Length: 4209} {NoTransDecoderORF} {RNA1509_49908} {RNA1310_28346} {RNA815_54494}
43. MligTC455_36567 18 0.37 Mlig455_065030

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_065030 {REF} {Length: 672}
44. MligTC455_37314 28 0.59 Mlig455_020645

Neo: -

Age: -

 CALM2 0.96 - - - - 0.960 - Mlig455_020645 {REF} {Length: 1006} {Pfam: EF-hand domain pair [PF13499.8, score=22.0]; EF-hand domain [PF14658.8, score=19.6]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=65.9, Expect=3e-13]; ENSG00000198668, CALM1, calmodulin 1, [Score=65.9, Expect=3e-13]; ENSG00000160014, CALM3, calmodulin 3, [Score=65.9, Expect=3e-13]; ENSG00000178363, CALML3, calmodulin like 3, [Score=65.1, Expect=6e-13]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=66.6, Expect=3e-13]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=65.9, Expect=2e-13]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=65.9, Expect=2e-13]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=67.8, Expect=3e-14]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_5491_0_1, dd_Smed_v6_5491_0_1, [Score=109, Expect=5e-30]} {RNA1310_33365} {RNA815_27013}
45. MligTC455_10196 48 1 Mlig455_035825

Neo: -

Age: logFC(26M/2M)=-0.579

 SOX7 0.959 - - 0.959 - - - Mlig455_035825 {REF} {Length: 1154} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=74.3]; HMG-box domain [PF09011.12, score=30.4]; Pleckstrin homology domain [PF15404.8, score=20.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.5]} {Human: ENSG00000285438, SOX7, SRY-box 7, [Score=116, Expect=8e-30]; ENSG00000171056, SOX7, SRY-box 7, [Score=116, Expect=8e-30]; ENSG00000203883, SOX18, SRY-box 18, [Score=115, Expect=3e-29]; ENSG00000125398, SOX9, SRY-box 9, [Score=113, Expect=5e-28]; ENSG00000164736, SOX17, SRY-box 17, [Score=113, Expect=2e-28]} {Mouse: ENSMUSG00000025902, Sox17, SRY (sex determining region Y)-box 17, [RH, Score=123, Expect=2e-34]} {Dmel: FBgn0005613, Sox15, Sox box protein 15, [Score=116, Expect=4e-29]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=107, Expect=5e-28]} {Smed: dd_Smed_v6_36521_0_1, dd_Smed_v6_36521_0_1, [Score=105, Expect=1e-26]} {RNA1310_54737.1} {RNA815_42176}
46. MligTC455_34641 301 6.27 Mlig455_027038

Neo: -

Age: -

 ATP2A1 0.959 - - 0.959 - - - Mlig455_027038 {REF} {Length: 4352} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=191.8]; Cation transporting ATPase, C-terminus [PF00689.23, score=146.4]; Cation transport ATPase (P-type) [PF13246.8, score=76.4]; haloacid dehalogenase-like hydrolase [PF00702.28, score=73.8]; Cation transporter/ATPase, N-terminus [PF00690.28, score=67.0]; haloacid dehalogenase-like hydrolase [PF12710.9, score=30.5]; haloacid dehalogenase-like hydrolase [PF08282.14, score=30.2]} {Human: ENSG00000196296, ATP2A1, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, [RH, Score=1462, Expect=0.0]; ENSG00000174437, ATP2A2, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, [RH, Score=1446, Expect=0.0]; ENSG00000074370, ATP2A3, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, [RH, Score=1403, Expect=0.0]} {Mouse: ENSMUSG00000030730, Atp2a1, ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, [RH, Score=1456, Expect=0.0]; ENSMUSG00000029467, Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, [RH, Score=1450, Expect=0.0]; ENSMUSG00000020788, Atp2a3, ATPase, Ca++ transporting, ubiquitous, [RH, Score=1404, Expect=0.0]} {Dmel: FBgn0263006, SERCA, Sarco/endoplasmic reticulum Ca(2+)-ATPase, [RH, Score=1493, Expect=0.0]} {Celegans: WBGene00004736, sca-1, Calcium-transporting ATPase, [RH, Score=1466, Expect=0.0]} {Smed: dd_Smed_v6_1772_0_1, dd_Smed_v6_1772_0_1, [RH, Score=1613, Expect=0.0]} {RNA1509_20343} {RNA1310_3029.1} {RNA815_2104.2}
47. MligTC455_04417 8 0.18 Mlig455_014866

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.547

 0.958 - - - - 0.958 - Mlig455_014866 {REF} {Length: 3595} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=123.6]} {RNA1509_7353} {RNA1310_1123.1} {RNA815_252.1}
48. MligTC455_18700 19 0.4 Mlig455_003655

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_003655 {REF} {Length: 471} {NoTransDecoderORF} {RNA1310_85204}
49. MligTC455_45851 33 0.69 Mlig455_020386

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_020386 {REF} {Length: 590} {RNA1509_48193} {RNA1310_97125}
50. MligTC455_46650 24 0.5 Mlig455_048649

Neo: -

Age: Down-Down-Up

 SLC46A2 0.957 - - 0.957 - - - Mlig455_048649 {REF} {Length: 2792} {Pfam: Major Facilitator Superfamily [PF07690.18, score=85.9]; PUCC protein [PF03209.17, score=18.4]} {Human: ENSG00000119457, SLC46A2, solute carrier family 46 member 2, [Score=71.6, Expect=1e-12]} {Mouse: ENSMUSG00000029650, Slc46a3, solute carrier family 46, member 3, [Score=75.9, Expect=3e-14]} {Dmel: FBgn0030576, CG15890, [RH, Score=102, Expect=1e-22]} {Celegans: WBGene00016705, C46C11.2, [RH, Score=96.3, Expect=7e-21]} {Smed: dd_Smed_v6_10822_0_1, dd_Smed_v6_10822_0_1, [Score=342, Expect=8e-112]} {RNA1509_40290} {RNA1310_13436} {RNA815_15082}
51. MligTC455_51653 188 3.92 Mlig455_026873, Mlig455_030823, Mlig455_047794

Neo: -

Age: Down-Up-Down

 DNASE1L1 0.957 - - 0.957 - - -

Mlig455_026873 {REF} {Length: 2133} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=36.6]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=167, Expect=5e-49]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=4e-51]} {RNA1310_32296.1} {RNA815_27566}

Mlig455_030823 {REF} {Length: 2074} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=37.1]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=167, Expect=2e-49]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=1e-51]} {RNA1310_32296.2} {RNA815_27566}

Mlig455_047794 {REF} {Length: 1791} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=35.6]} {Human: ENSG00000013563, DNASE1L1, deoxyribonuclease 1 like 1, [RH, Score=166, Expect=2e-48]} {Mouse: ENSMUSG00000024136, Dnase1l2, deoxyribonuclease 1-like 2, [RH, Score=171, Expect=3e-51]} {RNA1310_32296.2} {RNA815_27566}
52. MligTC455_22231 40 0.84 Mlig455_032140

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_032140 {REF} {Length: 3501} {NoTransDecoderORF} {RNA1509_38388} {RNA1310_14332} {RNA815_16291}
53. MligTC455_29740 15 0.32 Mlig455_001115

Neo: -

Age: -

 SLC5A8 0.956 - - - - 0.956 - Mlig455_001115 {REF} {Length: 1813} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=94.4]; Sodium:solute symporter family [PF00474.19, score=44.7]} {Human: ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=195, Expect=2e-53]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=195, Expect=2e-53]; ENSG00000148942, SLC5A12, solute carrier family 5 member 12, [Score=190, Expect=1e-51]} {Mouse: ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=194, Expect=2e-53]; ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=192, Expect=9e-53]} {Dmel: FBgn0034494, CG10444, [Score=162, Expect=2e-42]} {Celegans: WBGene00018716, F52H2.4, [Score=106, Expect=4e-24]} {Smed: dd_Smed_v6_13771_0_1, dd_Smed_v6_13771_0_1, [Score=162, Expect=2e-42]} {RNA1310_73267} {RNA815_24869}
54. MligTC455_16667 20 0.42 Mlig455_040694, Mlig455_064563

Neo: -

Age: -

 0.955 - - 0.955 - - -

Mlig455_040694 {REF} {Length: 1748} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.9]} {Smed: dd_Smed_v6_29877_0_1, dd_Smed_v6_29877_0_1, [Score=79.3, Expect=3e-16]} {RNA1310_144465}

Mlig455_064563 {REF} {Length: 2190} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.3]} {Smed: dd_Smed_v6_29877_0_1, dd_Smed_v6_29877_0_1, [Score=78.6, Expect=6e-16]} {RNA1310_118049}
55. MligTC455_43377 165 3.44 Mlig455_010858

Neo: -

Age: -

 ECI1 0.955 - - 0.955 - - - Mlig455_010858 {REF} {Length: 1478} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=129.1]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=44.2]} {Human: ENSG00000167969, ECI1, enoyl-CoA delta isomerase 1, [RH, Score=156, Expect=2e-45]} {Mouse: ENSMUSG00000024132, Eci1, enoyl-Coenzyme A delta isomerase 1, [RH, Score=171, Expect=1e-51]} {Dmel: FBgn0032160, CG4598, [RH, Score=165, Expect=2e-49]} {RNA1509_59982} {RNA1310_26151} {RNA815_13315}
56. MligTC455_29610 243 5.06 Mlig455_031720

Neo: -

Age: Up-Down-Up

 RBM12 0.953 - - - - 0.953 - Mlig455_031720 {REF} {Length: 8472} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.3]} {Human: ENSG00000244462, RBM12, RNA binding motif protein 12, [RH, Score=99.8, Expect=5e-22]} {Mouse: ENSMUSG00000089824, Rbm12, RNA binding motif protein 12, [RH, Score=97.8, Expect=1e-21]} {Dmel: FBgn0035235, CG7879, [Score=116, Expect=8e-26]} {Celegans: WBGene00013703, Y106G6D.7, [Score=97.4, Expect=5e-20]} {Smed: dd_Smed_v6_5908_0_1, dd_Smed_v6_5908_0_1, [RH, Score=108, Expect=8e-24]} {RNA1509_8705} {RNA1310_1058.1, RNA1509_8705} {RNA1509_8705, RNA815_1326.1}
57. MligTC455_34148 247 5.14 Mlig455_021858

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.517

Region-enriched R3: 3.529/0.00963

 0.953 - - 0.953 - - - Mlig455_021858 {REF} {Length: 16541} {Pfam: FKBP26_C-terminal [PF18046.3, score=39.1]; Galactoside-binding lectin [PF00337.24, score=27.5]} {RNA1509_23521} {RNA1310_3139} {RNA815_6819}
58. MligTC455_36686 47 0.97 Mlig455_056861

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_056861 {REF} {Length: 6184} {RNA1509_14690} {RNA1310_36097} {RNA815_32539}
59. MligTC455_49724 103 2.14 Mlig455_063517

Neo: -

Age: -

 PRR9 0.952 - - 0.952 - - - Mlig455_063517 {REF} {Length: 1834} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=9e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=59.3, Expect=2e-10]} {RNA1509_59537} {RNA1310_56082} {RNA815_50844}
60. MligTC455_21801 58 1.22 Mlig455_015442, Mlig455_032138

Neo: -

Age: -

 NPY1R 0.951 - - 0.951 - - -

Mlig455_015442 {REF} {Length: 2461} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=130.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=18.9]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=128, Expect=5e-32]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=122, Expect=2e-30]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=140, Expect=4e-36]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=120, Expect=1e-29]} {Smed: dd_Smed_v6_25204_0_1, dd_Smed_v6_25204_0_1, [Score=208, Expect=2e-61]} {RNA1310_49156} {RNA815_43783}

Mlig455_032138 {REF} {Length: 2633} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=129.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=18.6]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=126, Expect=2e-31]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=122, Expect=4e-30]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=136, Expect=1e-34]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=119, Expect=3e-29]} {Smed: dd_Smed_v6_25934_0_1, dd_Smed_v6_25934_0_1, [Score=207, Expect=5e-61]} {RNA1310_49156} {RNA815_43783}
61. MligTC455_27131 3362 70.04 Mlig455_010170

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.893

Region-enriched R3: 6.424/0.00000
Region-enriched R2: 5.578/0.00015

 0.951 - - 0.951 - - - Mlig455_010170 {REF} {Length: 578} {RNA1509_3816} {RNA1310_105811} {RNA815_7257.6}
62. MligTC455_26283 32 0.66 Mlig455_017872

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_017872 {REF} {Length: 2794} {RNA1509_998} {RNA1310_87.2} {RNA815_3880}
63. MligTC455_37972 58 1.22 Mlig455_013390

Neo: -

Age: -

 SPON1 0.95 - - - - 0.950 - Mlig455_013390 {REF} {Length: 2548} {Pfam: Spondin_N [PF06468.15, score=122.9]} {Human: ENSG00000262655, SPON1, spondin 1, [Score=134, Expect=2e-33]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [Score=132, Expect=3e-33]} {Dmel: FBgn0050046, CG30046, [Score=130, Expect=2e-32]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [Score=105, Expect=3e-24]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [Score=110, Expect=3e-26]} {RNA1310_35709} {RNA815_25752}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA