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Results for MligTC455_22481

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22481 83 1.72 Mlig455_019186

Neo: -

Age: -

 Mlig455_019186 {REF} {Length: 1281} {RNA1509_29601} {RNA1310_30845} {RNA815_46080.1}

Cumulative graph for MligTC455_22481

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.843 1.78 0.38586 1.00000
RegionR2 1.839 1.78 0.21566 0.58214
RegionR3 2.562 1.78 0.01822 0.22362
RegionR4 -0.153 1.78 0.88646 1.00000
RegionR5 0.302 1.78 0.73493 1.00000
RegionR6 -0.07 1.78 0.88277 1.00000
RegionR7 2.248 1.78 0.13183 0.68419
RegionR8 -1.886 1.78 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.598 1.78 0.99991 1.00000
RegenerationR2 1.352 1.78 0.06761 0.42414
RegenerationR3 -0.247 1.78 0.76708 0.97040
RegenerationR4 1.367 1.78 0.12465 0.53706
RegenerationR5 1.492 1.78 0.07007 0.41563
RegenerationR6 2.109 1.78 0.05060 0.28134
RegenerationBL 2.355 1.78 0.08177 0.33435
RegenerationTP 0.385 1.78 0.82008 1.00000


Genes with expression patterns similar to MligTC455_22481

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22481 83 1.72 Mlig455_019186

Neo: -

Age: -

 5 - 1.000 1.000 1.000 1.000 1.000 Mlig455_019186 {REF} {Length: 1281} {RNA1509_29601} {RNA1310_30845} {RNA815_46080.1}
2. MligTC455_40463 120 2.51 Mlig455_028008

Neo: -

Age: -

 1.825 - - - 0.871 0.954 - Mlig455_028008 {REF} {Length: 67} {NoTransDecoderORF} {RNA1509_5045} {RNA1310_14222} {RNA815_350}
3. MligTC455_14258 34 0.71 Mlig455_050333

Neo: -

Age: -

 1.746 - - - - 0.790 0.956 Mlig455_050333 {REF} {Length: 1941} {RNA1310_29786} {RNA815_30669}
4. MligTC455_24825 105 2.19 Mlig455_011292

Neo: -

Age: -

 1.73 - - - - 0.772 0.958 Mlig455_011292 {REF} {Length: 3653} {RNA1509_43125} {RNA1310_9297, RNA1509_43125} {RNA1509_43125, RNA815_39862}
5. MligTC455_19921 72 1.5 Mlig455_035338

Neo: -

Age: -

 1.682 - - 0.957 - 0.725 - Mlig455_035338 {REF} {Length: 818} {NoTransDecoderORF} {RNA1509_32347} {RNA1310_55518} {RNA815_50422}
6. MligTC455_28070 31 0.65 Mlig455_003961

Neo: -

Age: Up-Down-Down

 0.969 - - - - 0.969 - Mlig455_003961 {REF} {Length: 2138} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_10847.1} {RNA815_23623}
7. MligTC455_12940 24 0.5 Mlig455_019094

Neo: -

Age: logFC(26M/2M)=-1.094

 ZIC1 0.968 - - - - - 0.968 Mlig455_019094 {REF} {Length: 1831} {Pfam: Zic proteins zinc finger domain [PF18366.3, score=76.3]; Zinc-finger double domain [PF13465.8, score=29.6]; Zinc finger, C2H2 type [PF00096.28, score=23.2]} {Human: ENSG00000152977, ZIC1, Zic family member 1, [Score=167, Expect=1e-47]; ENSG00000043355, ZIC2, Zic family member 2, [Score=166, Expect=3e-46]; ENSG00000156925, ZIC3, Zic family member 3, [Score=163, Expect=8e-46]} {Mouse: ENSMUSG00000036972, Zic4, zinc finger protein of the cerebellum 4, [Score=168, Expect=6e-49]; ENSMUSG00000032368, Zic1, zinc finger protein of the cerebellum 1, [Score=167, Expect=8e-48]; ENSMUSG00000061524, Zic2, zinc finger protein of the cerebellum 2, [Score=166, Expect=2e-46]; ENSMUSG00000067860, Zic3, zinc finger protein of the cerebellum 3, [Score=164, Expect=2e-46]} {Dmel: FBgn0003002, opa, odd paired, [Score=164, Expect=2e-45]} {Celegans: WBGene00004335, ref-2, REgulator of Fusion, [Score=100, Expect=5e-24]} {Smed: dd_Smed_v6_15531_0_1, dd_Smed_v6_15531_0_1, [Score=169, Expect=2e-48]} {RNA1509_12223} {RNA1310_49525, RNA1509_12223} {RNA1509_12223, RNA815_49740}
8. MligTC455_34065 155 3.22 Mlig455_057127

Neo: -

Age: Up-Down-Up

 0.966 - - - - - 0.966 Mlig455_057127 {REF} {Length: 9700} {RNA1509_19375, RNA1509_20753, RNA1509_27043, RNA1509_49996} {RNA1310_9943, RNA1509_20753, RNA1509_27043, RNA1509_49996} {RNA1509_20753, RNA1509_27043, RNA1509_49996, RNA815_25153}
9. MligTC455_31602 208 4.33 Mlig455_031241, Mlig455_031248

Neo: -

Age: -

 0.964 - - - - - 0.964

Mlig455_031241 {REF} {Length: 1588} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36986} {RNA1310_4605} {RNA815_16115.1}

Mlig455_031248 {REF} {Length: 2570} {TRANSSPLICED} {RNA1509_36986} {RNA1310_45653} {RNA815_16115.2}
10. MligTC455_50511 110 2.29 Mlig455_039703

Neo: -

Age: Up-Down-Up

 HDAC11 0.961 - - - - - 0.961 Mlig455_039703 {REF} {Length: 1381} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=162.9]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=369, Expect=2e-127]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=368, Expect=3e-127]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [RH, Score=326, Expect=7e-111]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [RH, Score=313, Expect=9e-106]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=303, Expect=3e-102]} {RNA1310_29298} {RNA815_14482}
11. MligTC455_12912 311 6.47 Mlig455_039330, Mlig455_064070, Mlig455_064994

Neo: -

Age: -

Regeneration-downregulated R6: -5.737

Regeneration-depleted R6: -5.737

 0.959 - - - - 0.959 -

Mlig455_039330 {REF} {Length: 175} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_39872} {RNA1310_118613} {RNA815_50179}

Mlig455_064070 {REF} {Length: 175} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_39872} {RNA1310_118613} {RNA815_50179}

Mlig455_064994 {REF} {Length: 176} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_39872} {RNA1310_118613} {RNA815_50179}
12. MligTC455_47843 349 7.27 Mlig455_040270, Mlig455_040278

Neo: -

Age: -

 RPGRIP1L 0.959 - - - - 0.959 -

Mlig455_040270 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.6]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=85.5, Expect=3e-16]} {Celegans: WBGene00015646, mlt-10, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=90.1, Expect=4e-18]} {RNA1509_12953} {RNA1310_4375.1} {RNA815_1280}

Mlig455_040278 {REF} {Length: 4279} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=129, Expect=8e-30]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=126, Expect=5e-29]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=150, Expect=1e-36]} {RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1310_4375.1, RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1509_12953, RNA1509_16323, RNA1509_56954, RNA815_1280}
13. MligTC455_03331 12 0.26 Mlig455_058105

Neo: -

Age: Down-Up-Up

 0.958 - - - - - 0.958 Mlig455_058105 {REF} {Length: 1419} {RNA1509_47925} {RNA1310_20442.1} {RNA815_10982}
14. MligTC455_23278 386 8.04 Mlig455_037778

Neo: -

Age: logFC(26M/2M)=-0.605

 SLC13A3 0.957 - - - - 0.957 - Mlig455_037778 {REF} {Length: 3476} {Pfam: Sodium:sulfate symporter transmembrane region [PF00939.21, score=294.2]; Citrate transporter [PF03600.18, score=99.7]} {Human: ENSG00000158296, SLC13A3, solute carrier family 13 member 3, [Score=377, Expect=4e-121]} {Mouse: ENSMUSG00000018459, Slc13a3, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3, [Score=367, Expect=1e-117]; ENSMUSG00000001095, Slc13a2, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, [Score=359, Expect=9e-115]} {Dmel: FBgn0036816, Indy, I'm not dead yet, [Score=175, Expect=1e-46]} {Celegans: WBGene00007138, B0285.6, Uncharacterized transporter B0285.6, [Score=194, Expect=2e-53]} {Smed: dd_Smed_v6_5476_0_1, dd_Smed_v6_5476_0_1, [Score=315, Expect=3e-98]} {RNA1509_1723, RNA1509_48306} {RNA1310_5497, RNA1509_48306} {RNA1509_48306, RNA815_1709}
15. MligTC455_32612 55 1.15 Mlig455_015630

Neo: -

Age: -

Region-enriched R2: 5.626/0.02523

 ARX 0.957 - - - - - 0.957 Mlig455_015630 {REF} {Length: 2012} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=133, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=118, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=119, Expect=3e-33]} {RNA1310_42333.1} {RNA815_48205}
16. MligTC455_38114 228 4.74 Mlig455_012774, Mlig455_070139

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_012774 {REF} {Length: 1873} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_34010} {RNA815_56430}

Mlig455_070139 {REF} {Length: 863} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_49425} {RNA815_65230}
17. MligTC455_15756 43 0.89 Mlig455_006996

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_006996 {REF} {Length: 571} {Pfam: SEA domain [PF01390.22, score=24.1]; Predicted membrane protein (DUF2107) [PF09880.11, score=19.3]} {RNA1509_58111, RNA1509_58578} {RNA1310_40223, RNA1509_58111} {RNA1509_58111, RNA815_37309}
18. MligTC455_14236 149 3.1 Mlig455_017105

Neo: -

Age: Up-Down-Down

 WDSUB1 0.953 - - - - 0.953 - Mlig455_017105 {REF} {Length: 3758} {Pfam: WD domain, G-beta repeat [PF00400.34, score=166.2]; U-box domain [PF04564.17, score=59.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=44.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=42.6]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=28.6]} {Human: ENSG00000196151, WDSUB1, WD repeat, sterile alpha motif and U-box domain containing 1, [Score=210, Expect=2e-60]} {Mouse: ENSMUSG00000026988, Wdsub1, WD repeat, SAM and U-box domain containing 1, [Score=197, Expect=2e-56]} {Dmel: FBgn0021874, Nle, Notchless, [Score=105, Expect=9e-24]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=99.0, Expect=5e-22]} {Smed: dd_Smed_v6_5139_0_1, dd_Smed_v6_5139_0_1, [Score=103, Expect=2e-24]} {RNA1310_51636} {RNA815_18559}
19. MligTC455_26175 77 1.61 Mlig455_001462, Mlig455_004850, Mlig455_030045, Mlig455_039017

Neo: -

Age: -

Region-enriched R2: 5.289/0.03235

 NYNRIN 0.952 - - - - - 0.952

Mlig455_001462 {REF} {Length: 3779} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

Mlig455_004850 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

Mlig455_030045 {REF} {Length: 4782} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.6]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=49.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=44.5]; Aspartyl protease [PF13650.8, score=32.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=78.6, Expect=5e-14]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=6e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=265, Expect=5e-74]} {RNA1509_38388, RNA1509_56442} {RNA1310_4763.1, RNA1509_38388, RNA1509_56442} {RNA1509_38388, RNA1509_56442, RNA815_16141}

Mlig455_039017 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=48.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.7]; Aspartyl protease [PF13650.8, score=32.2]; Retroviral aspartyl protease [PF00077.22, score=19.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=76.6, Expect=3e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=76.6, Expect=2e-13]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=268, Expect=2e-74]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}
20. MligTC455_31744 756 15.76 Mlig455_063640, Mlig455_063642, Mlig455_063643, Mlig455_063644

Neo: -

Age: -

Region-enriched R4: 1.348/0.02100

 0.951 - - - - 0.951 -

Mlig455_063640 {REF} {Length: 789} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [Score=53.1, Expect=9e-09]} {RNA1509_42493} {RNA1310_2930} {RNA815_5886.1}

Mlig455_063642 {REF} {Length: 3154} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=57.0]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=21.8]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [RH, Score=148, Expect=4e-41]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273}

Mlig455_063643 {REF} {Length: 2392} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.7]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=19.7]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=131, Expect=3e-35]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273}

Mlig455_063644 {REF} {Length: 2767} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=56.9]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=20.6]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [RH, Score=149, Expect=2e-41]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273}
21. MligTC455_45126 149 3.11 Mlig455_021984, Mlig455_031762

Neo: -

Age: Up-Down-Down

Region-enriched R4: 3.664/0.01074

 0.951 - - 0.951 - - -

Mlig455_021984 {REF} {Length: 2008} {TRANSSPLICED} {RNA1509_59895} {RNA1310_900.1} {RNA815_1698.1}

Mlig455_031762 {REF} {Length: 2012} {TRANSSPLICED} {RNA1509_59895} {RNA1310_900.1} {RNA815_1698.1}
22. MligTC455_09094 56 1.16 Mlig455_013381

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_013381 {REF} {Length: 506} {NoTransDecoderORF} {RNA1310_99945}
23. MligTC455_32435 68 1.42 Mlig455_025058

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.638

 0.95 - - - - - 0.950 Mlig455_025058 {REF} {Length: 6341} {Mouse: ENSMUSG00000043183, Simc1, SUMO-interacting motifs containing 1, [Score=58.2, Expect=1e-07]} {RNA1509_27520, RNA1509_33149, RNA1509_59656} {RNA1310_50.1, RNA1509_27520, RNA1509_33149, RNA1509_59656} {RNA1509_27520, RNA1509_33149, RNA1509_59656, RNA815_5201}

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