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Results for MligTC455_23570

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23570 81 1.68 Mlig455_013090

Neo: -

Age: Up-Down-Down

 TIAM2 Mlig455_013090 {REF} {Length: 5714} {Pfam: RhoGEF domain [PF00621.22, score=80.6]; PH domain [PF00169.31, score=52.0]; T-lymphoma invasion and metastasis CC-Ex domain [PF18385.3, score=44.0]; Pleckstrin homology domain [PF15410.8, score=39.2]; PDZ domain [PF17820.3, score=30.4]; PDZ domain [PF00595.26, score=22.8]} {Human: ENSG00000146426, TIAM2, T cell lymphoma invasion and metastasis 2, [Score=246, Expect=2e-65]; ENSG00000156299, TIAM1, T cell lymphoma invasion and metastasis 1, [Score=242, Expect=5e-64]} {Mouse: ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=245, Expect=6e-65]; ENSMUSG00000002489, Tiam1, T cell lymphoma invasion and metastasis 1, [Score=242, Expect=1e-65]} {Dmel: FBgn0085447, sif, still life, [Score=258, Expect=9e-69]} {RNA1509_26471} {RNA1310_2308.1} {RNA815_4637}

Cumulative graph for MligTC455_23570

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.893 1.784 0.48098 1.00000
RegionR2 1.522 1.784 0.23218 0.60476
RegionR3 0.222 1.784 0.78628 1.00000
RegionR4 0.11 1.784 0.82763 1.00000
RegionR5 0.201 1.784 0.79369 1.00000
RegionR6 0.88 1.784 0.45514 1.00000
RegionR7 0.715 1.784 0.62028 1.00000
RegionR8 0.241 1.784 0.83405 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.767 1.784 0.99992 1.00000
RegenerationR2 -0.588 1.784 0.43360 0.83637
RegenerationR3 0.685 1.784 0.48410 0.85223
RegenerationR4 0.521 1.784 0.59066 0.90924
RegenerationR5 0.537 1.784 0.50599 0.86163
RegenerationR6 -0.636 1.784 0.49541 0.80248
RegenerationBL 0.003 1.784 0.99628 1.00000
RegenerationTP 0.18 1.784 0.90349 1.00000


Genes with expression patterns similar to MligTC455_23570

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23570 81 1.68 Mlig455_013090

Neo: -

Age: Up-Down-Down

 TIAM2 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_013090 {REF} {Length: 5714} {Pfam: RhoGEF domain [PF00621.22, score=80.6]; PH domain [PF00169.31, score=52.0]; T-lymphoma invasion and metastasis CC-Ex domain [PF18385.3, score=44.0]; Pleckstrin homology domain [PF15410.8, score=39.2]; PDZ domain [PF17820.3, score=30.4]; PDZ domain [PF00595.26, score=22.8]} {Human: ENSG00000146426, TIAM2, T cell lymphoma invasion and metastasis 2, [Score=246, Expect=2e-65]; ENSG00000156299, TIAM1, T cell lymphoma invasion and metastasis 1, [Score=242, Expect=5e-64]} {Mouse: ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=245, Expect=6e-65]; ENSMUSG00000002489, Tiam1, T cell lymphoma invasion and metastasis 1, [Score=242, Expect=1e-65]} {Dmel: FBgn0085447, sif, still life, [Score=258, Expect=9e-69]} {RNA1509_26471} {RNA1310_2308.1} {RNA815_4637}
2. MligTC455_34572 115 2.39 Mlig455_043073, Mlig455_053935, Mlig455_066304, Mlig455_068239, Mlig455_070555

Neo: -

Age: Up-Down-Up

 CAMKV, RTL1 1.729 0.759 - - - 0.970 -

Mlig455_043073 {REF} {Length: 1289} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=44.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=40.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=82.8, Expect=4e-18]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=66.2, Expect=1e-12]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=66.2, Expect=1e-12]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=150, Expect=3e-42]} {RNA1509_3061} {RNA1310_189.1} {RNA815_86.1}

Mlig455_053935 {REF} {Length: 791} {Human: ENSG00000164076, CAMKV, CaM kinase like vesicle associated, [Score=48.1, Expect=8e-06]} {Mouse: ENSMUSG00000032936, Camkv, CaM kinase-like vesicle-associated, [Score=48.1, Expect=5e-06]} {RNA1509_53656} {RNA1310_189.1} {RNA815_86.1}

Mlig455_066304 {REF} {Length: 10800} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=94.4]; Aspartyl protease [PF09668.12, score=26.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.2]; Aspartyl protease [PF13650.8, score=23.0]; 'Cold-shock' DNA-binding domain [PF00313.24, score=21.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=105, Expect=5e-22]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=90.5, Expect=1e-17]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=90.5, Expect=1e-17]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=313, Expect=8e-94]} {RNA1509_3061} {RNA1310_336.1} {RNA815_86.1}

Mlig455_068239 {REF} {Length: 2058} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=20.4]} {Smed: dd_Smed_v6_24304_0_1, dd_Smed_v6_24304_0_1, [Score=43.9, Expect=2e-07]} {RNA1509_3061} {RNA1310_336.1} {RNA815_86.1}

Mlig455_070555 {REF} {Length: 455} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=94.4]; Aspartyl protease [PF09668.12, score=26.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.2]; Aspartyl protease [PF13650.8, score=23.0]; 'Cold-shock' DNA-binding domain [PF00313.24, score=21.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=105, Expect=5e-22]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=90.5, Expect=1e-17]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=90.5, Expect=1e-17]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=313, Expect=8e-94]} {RNA1509_3061} {RNA1310_336.1} {RNA815_86.1}
3. MligTC455_31047 265 5.53 Mlig455_016720

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_016720 {REF} {Length: 449} {RNA1509_13348} {RNA1310_46678} {RNA815_21464}
4. MligTC455_08277 39 0.81 Mlig455_015604

Neo: -

Age: -

 PAQR8 0.98 - - 0.980 - - - Mlig455_015604 {REF} {Length: 1803} {Pfam: Haemolysin-III related [PF03006.22, score=71.6]} {Human: ENSG00000170915, PAQR8, progestin and adipoQ receptor family member 8, [Score=82.0, Expect=8e-17]} {Mouse: ENSMUSG00000025931, Paqr8, progestin and adipoQ receptor family member VIII, [Score=86.3, Expect=2e-18]} {Dmel: FBgn0038256, CG7530, [Score=50.8, Expect=7e-07]} {Celegans: WBGene00019643, K11C4.2, [Score=62.8, Expect=6e-11]} {Smed: dd_Smed_v6_14141_0_1, dd_Smed_v6_14141_0_1, [Score=65.5, Expect=9e-12]} {RNA1509_10181} {RNA1310_17206} {RNA815_6661}
5. MligTC455_52113 309 6.44 Mlig455_020726, Mlig455_020795

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.064/0.01451

 0.974 - - - - 0.974 -

Mlig455_020726 {REF} {Length: 1125} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [Score=50.8, Expect=2e-08]} {RNA1509_46103} {RNA1310_6410.3} {RNA815_31889}

Mlig455_020795 {REF} {Length: 1037} {TRANSSPLICED} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [Score=50.8, Expect=2e-08]} {RNA1509_46103} {RNA1310_6410.3} {RNA815_31889}
6. MligTC455_30458 451 9.39 Mlig455_062993

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.026

 FTCD 0.96 - - - - 0.960 - Mlig455_062993 {REF} {Length: 2008} {Pfam: Formiminotransferase domain, N-terminal subdomain [PF07837.14, score=187.7]; Formiminotransferase domain [PF02971.16, score=179.9]; Formiminotransferase-cyclodeaminase [PF04961.14, score=66.0]} {Human: ENSG00000160282, FTCD, formimidoyltransferase cyclodeaminase, [Score=400, Expect=9e-135]; ENSG00000281775, FTCD, formimidoyltransferase cyclodeaminase, [Score=399, Expect=6e-136]} {Mouse: ENSMUSG00000001155, Ftcd, formiminotransferase cyclodeaminase, [Score=402, Expect=7e-136]} {Smed: dd_Smed_v6_7815_0_1, dd_Smed_v6_7815_0_1, [Score=292, Expect=3e-93]} {RNA1509_29292} {RNA1310_13312} {RNA815_5334}
7. MligTC455_37310 188 3.92 Mlig455_043635

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=3.872

 ARRDC4 0.955 - - - - 0.955 - Mlig455_043635 {REF} {Length: 2231} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=81.3]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=44.1]} {Human: ENSG00000140450, ARRDC4, arrestin domain containing 4, [Score=70.1, Expect=3e-12]; ENSG00000197070, ARRDC1, arrestin domain containing 1, [Score=67.8, Expect=2e-11]} {Mouse: ENSMUSG00000026972, Arrdc1, arrestin domain containing 1, [Score=63.5, Expect=3e-10]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [Score=78.2, Expect=2e-15]} {Celegans: WBGene00018060, arrd-18, ARRestin Domain protein, [Score=65.5, Expect=4e-11]} {RNA1509_13418} {RNA1310_36821} {RNA815_11006.1}
8. MligTC455_49622 11 0.23 Mlig455_070756

Neo: -

Age: Down-Down-Up

 SFT2D2 0.955 - - - - - 0.955 Mlig455_070756 {REF} {Length: 2807} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=100.2]} {Human: ENSG00000213064, SFT2D2, SFT2 domain containing 2, [Score=181, Expect=2e-58]} {Mouse: ENSMUSG00000040848, Sft2d2, SFT2 domain containing 2, [Score=179, Expect=7e-58]} {Dmel: FBgn0037009, CG5104, [Score=174, Expect=5e-56]} {Celegans: WBGene00009191, F27D4.7, Vesicle transport protein, [Score=82.0, Expect=4e-20]} {Smed: dd_Smed_v6_3839_0_1, dd_Smed_v6_3839_0_1, [Score=179, Expect=2e-58]} {RNA1509_50255} {RNA1310_51577} {RNA815_20933}
9. MligTC455_53094 2333 48.61 Mlig455_002734, Mlig455_063350

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.745

Region-enriched R4: 2.207/0.00184

 SOX2 0.955 - - - - 0.955 -

Mlig455_002734 {REF} {Length: 2479} {Pfam: HMG (high mobility group) box [PF00505.21, score=93.9]; HMG-box domain [PF09011.12, score=42.1]; VIT family [PF01988.21, score=19.5]} {Human: ENSG00000181449, SOX2, SRY-box 2, [RH, Score=183, Expect=1e-53]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [RH, Score=183, Expect=9e-54]} {Dmel: FBgn0029123, SoxN, SoxNeuro, [RH, Score=163, Expect=1e-43]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [RH, Score=177, Expect=4e-52]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [RH, Score=163, Expect=2e-44]} {RNA1509_11450} {RNA1310_8352, RNA1509_11450} {RNA1509_11450, RNA815_15989}

Mlig455_063350 {REF} {Length: 2568} {Pfam: HMG (high mobility group) box [PF00505.21, score=93.9]; HMG-box domain [PF09011.12, score=42.1]} {Human: ENSG00000181449, SOX2, SRY-box 2, [RH, Score=183, Expect=2e-53]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [RH, Score=183, Expect=1e-53]} {Dmel: FBgn0029123, SoxN, SoxNeuro, [RH, Score=163, Expect=1e-43]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [RH, Score=177, Expect=4e-52]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [RH, Score=163, Expect=2e-44]} {RNA1509_11450, RNA1509_19275, RNA1509_34805, RNA1509_47357} {RNA1310_8352, RNA1509_19275, RNA1509_34805, RNA1509_47357} {RNA1509_19275, RNA1509_34805, RNA1509_47357, RNA815_15989}
10. MligTC455_30457 489 10.18 Mlig455_051232

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.520

 FTCD 0.952 - - - - 0.952 - Mlig455_051232 {REF} {Length: 3312} {Pfam: Formiminotransferase domain, N-terminal subdomain [PF07837.14, score=229.8]; Formiminotransferase domain [PF02971.16, score=200.9]; Formiminotransferase-cyclodeaminase [PF04961.14, score=176.4]; SAP domain [PF02037.29, score=32.2]} {Human: ENSG00000160282, FTCD, formimidoyltransferase cyclodeaminase, [RH, Score=571, Expect=0.0]} {Mouse: ENSMUSG00000001155, Ftcd, formiminotransferase cyclodeaminase, [RH, Score=571, Expect=0.0]} {Smed: dd_Smed_v6_7815_0_1, dd_Smed_v6_7815_0_1, [RH, Score=398, Expect=1e-127]} {RNA1509_29292} {RNA1310_13312} {RNA815_5334}
11. MligTC455_17713 953 19.85 Mlig455_020156

Neo: -

Age: -

Region-enriched R4: 1.533/0.04073

 AJM1 0.95 - - - - 0.950 - Mlig455_020156 {REF} {Length: 9403} {Pfam: MYND finger [PF01753.20, score=23.4]} {Human: ENSG00000232434, AJM1, apical junction component 1 homolog, [RH, Score=133, Expect=2e-30]} {Mouse: ENSMUSG00000029419, Ajm1, apical junction component 1, [RH, Score=137, Expect=1e-31]} {Dmel: FBgn0261802, CG42748, [RH, Score=99.4, Expect=4e-20]} {Celegans: WBGene00000100, ajm-1, Apical Junction Molecule, [Score=76.6, Expect=2e-13]} {Smed: dd_Smed_v6_11689_0_1, dd_Smed_v6_11689_0_1, [RH, Score=119, Expect=8e-28]} {RNA1509_8231} {RNA1310_1413, RNA1509_8231} {RNA1509_8231, RNA815_4970}
12. MligTC455_23793 99 2.07 Mlig455_033726

Neo: -

Age: -

 CDK6 0.95 - - - - - 0.950 Mlig455_033726 {REF} {Length: 2878} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=158.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.8]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=140, Expect=3e-37]; ENSG00000135446, CDK4, cyclin dependent kinase 4, [Score=138, Expect=9e-37]} {Mouse: ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=149, Expect=1e-41]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=137, Expect=2e-36]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [Score=120, Expect=1e-30]} {Smed: dd_Smed_v6_6179_0_5, dd_Smed_v6_6179_0_5, [Score=135, Expect=3e-36]} {RNA1509_24860} {RNA1310_17562} {RNA815_8098}

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