TomoSeq data search

Data search

Results for MligTC455_26314

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26314

5157

107.45

Mlig455_030231

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.467

SQSTM1

Mlig455_030231 {REF} {Length: 2335} {Pfam: UBA domain [PF16577.7, score=51.0]; Zinc finger, ZZ type [PF00569.19, score=38.4]; PB1 domain [PF00564.26, score=22.7]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [Score=65.5, Expect=6e-11]; ENSG00000284099, AC008393.2, sequestosome 1, [Score=64.7, Expect=9e-11]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=103, Expect=1e-23]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=49.3, Expect=5e-06]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=55.5, Expect=5e-08]} {RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911} {RNA1310_32633, RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911} {RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911, RNA815_1033}

Cumulative graph for MligTC455_26314

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.84	6.876	0.15486	0.77251
RegionR2	-0.29	6.876	0.50008	0.87950
RegionR3	0.256	6.876	0.49523	0.99168
RegionR4	0.401	6.876	0.34274	0.66321
RegionR5	0.203	6.876	0.58258	0.94098
RegionR6	0.28	6.876	0.45297	1.00000
RegionR7	-0.001	6.876	0.99901	1.00000
RegionR8	-0.01	6.876	0.98044	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.539	6.876	0.06785	0.74761
RegenerationR2	0.337	6.876	0.48268	0.86452
RegenerationR3	-0.578	6.876	0.23988	0.67461
RegenerationR4	-0.597	6.876	0.23497	0.68351
RegenerationR5	-0.343	6.876	0.48118	0.84686
RegenerationR6	-0.451	6.876	0.36165	0.70615
RegenerationBL	-1.226	6.876	0.00788	0.08703
RegenerationTP	-0.005	6.876	0.99057	1.00000

Genes with expression patterns similar to MligTC455_26314

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26314	5157	107.45	Mlig455_030231	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.467	SQSTM1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_030231 {REF} {Length: 2335} {Pfam: UBA domain [PF16577.7, score=51.0]; Zinc finger, ZZ type [PF00569.19, score=38.4]; PB1 domain [PF00564.26, score=22.7]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [Score=65.5, Expect=6e-11]; ENSG00000284099, AC008393.2, sequestosome 1, [Score=64.7, Expect=9e-11]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=103, Expect=1e-23]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=49.3, Expect=5e-06]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=55.5, Expect=5e-08]} {RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911} {RNA1310_32633, RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911} {RNA1509_10635, RNA1509_4756, RNA1509_5318, RNA1509_911, RNA815_1033}
2.	MligTC455_26315	6236	129.91	Mlig455_068010	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.365	SQSTM1	5.584	0.863	0.973	0.971	0.995	0.924	0.858	Mlig455_068010 {REF} {Length: 5406} {Pfam: UBA domain [PF16577.7, score=51.0]; Zinc finger, ZZ type [PF00569.19, score=38.4]; PB1 domain [PF00564.26, score=22.7]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [Score=65.5, Expect=6e-11]; ENSG00000284099, AC008393.2, sequestosome 1, [Score=64.7, Expect=9e-11]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=102, Expect=1e-23]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [Score=49.3, Expect=5e-06]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=55.5, Expect=5e-08]} {RNA1509_911} {RNA1310_32633} {RNA815_1033}
3.	MligTC455_44970	1433	29.86	Mlig455_019009	Neo: - Age: Up-Down-Up Region-enriched R2: 1.095/0.00909 Regeneration-downregulated BL: -1.437 Regeneration-depleted BL: -1.437	ATP1B1	1.783	-	-	-	-	0.809	0.974	Mlig455_019009 {REF} {Length: 4231} {TRANSSPLICED} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=91.0]} {Human: ENSG00000143153, ATP1B1, ATPase Na+/K+ transporting subunit beta 1, [Score=61.2, Expect=6e-10]} {Mouse: ENSMUSG00000026576, Atp1b1, ATPase, Na+/K+ transporting, beta 1 polypeptide, [Score=61.2, Expect=4e-10]} {Dmel: FBgn0032946, nrv3, nervana 3, [Score=89.4, Expect=8e-20]} {Celegans: WBGene00010117, nkb-3, Probable sodium/potassium-transporting ATPase subunit beta-3, [Score=84.3, Expect=3e-18]} {Smed: dd_Smed_v6_7917_0_1, dd_Smed_v6_7917_0_1, [Score=115, Expect=2e-29]} {RNA1509_10526, RNA1509_49181} {RNA1310_31711, RNA1509_10526, RNA1509_49181} {RNA1509_10526, RNA1509_49181, RNA815_17406}
4.	MligTC455_43049	1806	37.62	Mlig455_062571	Neo: - Age: -	ACAN	1.725	-	-	-	0.951	0.774	-	Mlig455_062571 {REF} {Length: 5543} {TRANSSPLICED} {Human: ENSG00000157766, ACAN, aggrecan, [RH, Score=120, Expect=2e-26]} {Mouse: ENSMUSG00000030607, Acan, aggrecan, [Score=58.2, Expect=9e-08]} {Celegans: WBGene00013762, Y113G7B.12, [Score=57.0, Expect=1e-07]} {RNA1509_5653} {RNA1310_12100} {RNA815_6156.1}
5.	MligTC455_23031	559	11.65	Mlig455_004920, Mlig455_019740	Neo: - Age: logFC(26M/2M)=0.748	NLK	1.706	-	-	-	-	0.755	0.951	Mlig455_004920 {REF} {Length: 2917} {Pfam: Protein kinase domain [PF00069.27, score=199.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.1]; Phosphotransferase enzyme family [PF01636.25, score=23.6]; Fungal protein kinase [PF17667.3, score=21.1]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000087095, NLK, nemo like kinase, [Score=380, Expect=2e-126]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [Score=380, Expect=1e-126]} {Dmel: FBgn0011817, nmo, nemo, [Score=369, Expect=7e-124]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [Score=347, Expect=4e-115]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [Score=350, Expect=3e-116]} {RNA1310_28916} {RNA815_34936} Mlig455_019740 {REF} {Length: 3316} {Pfam: Protein kinase domain [PF00069.27, score=199.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.1]; Phosphotransferase enzyme family [PF01636.25, score=22.2]; Fungal protein kinase [PF17667.3, score=21.2]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000087095, NLK, nemo like kinase, [Score=367, Expect=9e-122]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [Score=367, Expect=7e-122]} {Dmel: FBgn0011817, nmo, nemo, [Score=364, Expect=2e-122]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [Score=344, Expect=3e-114]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [Score=351, Expect=8e-117]} {RNA1310_28916} {RNA815_34936}
6.	MligTC455_28299	2270	47.29	Mlig455_059761	Neo: - Age: logFC(26M/2M)=0.708		1.664	-	-	-	0.958	0.706	-	Mlig455_059761 {REF} {Length: 1040} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9050} {RNA1310_21372.2, RNA1509_9050} {RNA1509_9050, RNA815_15381}
7.	MligTC455_28298	2452	51.09	Mlig455_027052, Mlig455_033234	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_027052 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1509_13847} {RNA1310_10847.1} {RNA815_5428.1} Mlig455_033234 {REF} {Length: 3912} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13847, RNA1509_36354} {RNA1310_14467, RNA1509_36354} {RNA1509_36354, RNA815_5428.1}
8.	MligTC455_22713	787	16.4	Mlig455_023280	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_023280 {REF} {Length: 2898} {RNA1509_17376} {RNA1310_6954} {RNA815_8376.1}
9.	MligTC455_37401	592	12.33	Mlig455_056107	Neo: - Age: logFC(26M/2M)=-0.696		0.954	-	-	-	0.954	-	-	Mlig455_056107 {REF} {Length: 2111} {RNA1509_30010} {RNA1310_55937, RNA1509_30010} {RNA1509_30010, RNA815_28707}
10.	MligTC455_25896	2685	55.93	Mlig455_028813	Neo: - Age: - Regeneration-downregulated BL: -1.413 Regeneration-depleted BL: -1.413	SERINC3	0.952	-	-	-	0.952	-	-	Mlig455_028813 {REF} {Length: 2623} {TRANSSPLICED} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=514.1]} {Human: ENSG00000132824, SERINC3, serine incorporator 3, [RH, Score=412, Expect=3e-140]} {Mouse: ENSMUSG00000019877, Serinc1, serine incorporator 1, [RH, Score=410, Expect=3e-140]} {Dmel: FBgn0028399, TMS1, [RH, Score=350, Expect=2e-116]} {Celegans: WBGene00021956, Y57E12AL.1, [RH, Score=374, Expect=8e-126]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [RH, Score=515, Expect=0.0]} {RNA1509_48832, RNA1509_6329} {RNA1310_16171, RNA1509_48832, RNA1509_6329} {RNA1509_48832, RNA1509_6329, RNA815_6171}
11.	MligTC455_28982	15213	316.93	Mlig455_025642	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.852		0.951	-	-	0.951	-	-	-	Mlig455_025642 {REF} {Length: 195} {NoTransDecoderORF} {RNA1509_892} {RNA1310_53106.5} {RNA815_11555.1}
12.	MligTC455_42625	514	10.71	Mlig455_030550	Neo: - Age: logFC(26M/2M)=-0.257	FHAD1	0.95	-	-	-	-	-	0.950	Mlig455_030550 {REF} {Length: 4380} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=46.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=28.5]} {Human: ENSG00000142621, FHAD1, forkhead associated phosphopeptide binding domain 1, [Score=94.0, Expect=1e-18]} {Mouse: ENSMUSG00000051435, Fhad1, forkhead-associated (FHA) phosphopeptide binding domain 1, [Score=89.4, Expect=2e-17]; ENSMUSG00000116181, Fhad1, forkhead-associated (FHA) phosphopeptide binding domain 1, [Score=89.4, Expect=2e-17]} {Smed: dd_Smed_v6_14350_0_1, dd_Smed_v6_14350_0_1, [Score=122, Expect=1e-27]} {RNA1509_16296, RNA1509_55326} {RNA1310_9155.1, RNA1509_16296, RNA1509_55326} {RNA1509_16296, RNA1509_55326, RNA815_22370}

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