TomoSeq data search

Data search

Results for MligTC455_27422

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27422

441

9.18

Mlig455_040999

Neo: -

Age: -

ATF7

Mlig455_040999 {REF} {Length: 3724} {TRANSSPLICED} {Pfam: bZIP transcription factor [PF00170.23, score=30.3]; Basic region leucine zipper [PF07716.17, score=24.9]; Phlebovirus nonstructural protein NS-M [PF07246.13, score=24.6]; bZIP Maf transcription factor [PF03131.19, score=22.6]} {Human: ENSG00000170653, ATF7, activating transcription factor 7, [Score=73.6, Expect=3e-13]; ENSG00000267281, AC023509.3, novel protein, [Score=73.2, Expect=4e-13]; ENSG00000115966, ATF2, activating transcription factor 2, [Score=72.8, Expect=6e-13]; ENSG00000146592, CREB5, cAMP responsive element binding protein 5, [Score=70.1, Expect=3e-12]} {Mouse: ENSMUSG00000099083, Atf7, activating transcription factor 7, [Score=73.6, Expect=2e-13]; ENSMUSG00000052414, Gm28047, predicted gene, 28047, [Score=72.4, Expect=5e-13]; ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=72.0, Expect=7e-13]} {Dmel: FBgn0265784, CrebB, Cyclic-AMP response element binding protein B, [Score=50.4, Expect=3e-06]} {Celegans: WBGene00000793, crh-1, CREB Homolog; Cyclic AMP-response element binding protein 1 gamma 2, [Score=55.8, Expect=5e-08]} {RNA1509_19991, RNA1509_49323} {RNA1310_14708, RNA1509_19991, RNA1509_49323} {RNA1509_19991, RNA1509_49323, RNA815_18843.1}

Cumulative graph for MligTC455_27422

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.846	3.477	0.27157	0.92191
RegionR2	-0.249	3.477	0.65942	0.99223
RegionR3	-0.203	3.477	0.68736	1.00000
RegionR4	0.429	3.477	0.38415	0.70885
RegionR5	0.654	3.477	0.09659	0.29822
RegionR6	0.787	3.477	0.06735	0.48504
RegionR7	-0.566	3.477	0.44213	1.00000
RegionR8	0.994	3.477	0.15501	0.71337

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.843	3.477	0.72193	1.00000
RegenerationR2	0.641	3.477	0.06695	0.42238
RegenerationR3	0.236	3.477	0.58693	0.90212
RegenerationR4	0.202	3.477	0.62060	0.92097
RegenerationR5	-0.108	3.477	0.76157	0.97598
RegenerationR6	-0.313	3.477	0.44018	0.76401
RegenerationBL	0.47	3.477	0.34797	0.71532
RegenerationTP	-0.125	3.477	0.84642	1.00000

Genes with expression patterns similar to MligTC455_27422

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27422	441	9.18	Mlig455_040999	Neo: - Age: -	ATF7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040999 {REF} {Length: 3724} {TRANSSPLICED} {Pfam: bZIP transcription factor [PF00170.23, score=30.3]; Basic region leucine zipper [PF07716.17, score=24.9]; Phlebovirus nonstructural protein NS-M [PF07246.13, score=24.6]; bZIP Maf transcription factor [PF03131.19, score=22.6]} {Human: ENSG00000170653, ATF7, activating transcription factor 7, [Score=73.6, Expect=3e-13]; ENSG00000267281, AC023509.3, novel protein, [Score=73.2, Expect=4e-13]; ENSG00000115966, ATF2, activating transcription factor 2, [Score=72.8, Expect=6e-13]; ENSG00000146592, CREB5, cAMP responsive element binding protein 5, [Score=70.1, Expect=3e-12]} {Mouse: ENSMUSG00000099083, Atf7, activating transcription factor 7, [Score=73.6, Expect=2e-13]; ENSMUSG00000052414, Gm28047, predicted gene, 28047, [Score=72.4, Expect=5e-13]; ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=72.0, Expect=7e-13]} {Dmel: FBgn0265784, CrebB, Cyclic-AMP response element binding protein B, [Score=50.4, Expect=3e-06]} {Celegans: WBGene00000793, crh-1, CREB Homolog; Cyclic AMP-response element binding protein 1 gamma 2, [Score=55.8, Expect=5e-08]} {RNA1509_19991, RNA1509_49323} {RNA1310_14708, RNA1509_19991, RNA1509_49323} {RNA1509_19991, RNA1509_49323, RNA815_18843.1}
2.	MligTC455_27423	341	7.1	Mlig455_041107	Neo: - Age: -	ATF7	5.242	0.896	0.954	0.859	0.750	0.859	0.924	Mlig455_041107 {REF} {Length: 12693} {TRANSSPLICED} {Pfam: bZIP transcription factor [PF00170.23, score=30.3]; Basic region leucine zipper [PF07716.17, score=24.9]; Phlebovirus nonstructural protein NS-M [PF07246.13, score=23.5]; bZIP Maf transcription factor [PF03131.19, score=22.6]} {Human: ENSG00000170653, ATF7, activating transcription factor 7, [Score=73.6, Expect=3e-13]; ENSG00000267281, AC023509.3, novel protein, [Score=73.2, Expect=4e-13]; ENSG00000115966, ATF2, activating transcription factor 2, [Score=72.8, Expect=6e-13]; ENSG00000146592, CREB5, cAMP responsive element binding protein 5, [Score=70.1, Expect=3e-12]} {Mouse: ENSMUSG00000099083, Atf7, activating transcription factor 7, [Score=73.6, Expect=2e-13]; ENSMUSG00000052414, Gm28047, predicted gene, 28047, [Score=72.0, Expect=5e-13]; ENSMUSG00000027104, Atf2, activating transcription factor 2, [Score=72.0, Expect=7e-13]; ENSMUSG00000053007, Creb5, cAMP responsive element binding protein 5, [Score=70.1, Expect=2e-12]} {Dmel: FBgn0265784, CrebB, Cyclic-AMP response element binding protein B, [Score=50.4, Expect=2e-06]} {Celegans: WBGene00000793, crh-1, CREB Homolog; Cyclic AMP-response element binding protein 1 gamma 2, [Score=55.5, Expect=5e-08]} {RNA1509_38544, RNA1509_55431} {RNA1310_2645.1, RNA1509_55431} {RNA1509_55431, RNA815_335.1}
3.	MligTC455_23008	404	8.42	Mlig455_040215	Neo: - Age: -	TRIM3	1.703	-	-	-	0.752	-	0.951	Mlig455_040215 {REF} {Length: 4174} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=53.0]; Filamin/ABP280 repeat [PF00630.21, score=34.4]; zinc-RING finger domain [PF14634.8, score=34.4]; RING-type zinc-finger [PF13445.8, score=30.6]; Ring finger domain [PF13639.8, score=28.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.7]; B-box zinc finger [PF00643.26, score=21.4]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.7]; Prokaryotic RING finger family 4 [PF14447.8, score=18.7]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=168, Expect=3e-43]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=166, Expect=2e-42]} {Dmel: FBgn0265356, tn, thin, [Score=64.3, Expect=3e-10]} {Celegans: WBGene00003599, nhl-3, NHL (Ring finger b-box coiled coil) domain containing, [RH, Score=334, Expect=3e-104]} {RNA1509_19389, RNA1509_36179} {RNA1310_9271, RNA1509_19389, RNA1509_36179} {RNA1509_19389, RNA1509_36179, RNA815_11075}
4.	MligTC455_19931	509	10.59	Mlig455_019597	Neo: - Age: -		1.68	-	-	-	0.730	-	0.950	Mlig455_019597 {REF} {Length: 1180} {TRANSSPLICED} {Pfam: Elongation complex protein 6 [PF09807.11, score=32.2]} {RNA1509_17561, RNA1509_56103} {RNA1310_2795.1, RNA1509_17561, RNA1509_56103} {RNA1509_17561, RNA1509_56103, RNA815_13493}
5.	MligTC455_28194	414	8.62	Mlig455_029417	Neo: - Age: -	CLASRP	0.977	-	-	-	-	-	0.977	Mlig455_029417 {REF} {Length: 8883} {TRANSSPLICED} {Pfam: Alternative splicing regulator [PF09750.11, score=127.5]} {Human: ENSG00000104859, CLASRP, CLK4 associating serine/arginine rich protein, [RH, Score=196, Expect=2e-53]} {Mouse: ENSMUSG00000061028, Clasrp, CLK4-associating serine/arginine rich protein, [RH, Score=199, Expect=4e-54]} {Dmel: FBgn0039215, CG6695, [RH, Score=190, Expect=5e-50]} {Celegans: WBGene00009200, F28C1.1, [RH, Score=153, Expect=1e-38]} {Smed: dd_Smed_v6_3095_0_1, dd_Smed_v6_3095_0_1, [RH, Score=244, Expect=2e-73]} {RNA1509_27971} {RNA1310_6399.1} {RNA815_1450.1}
6.	MligTC455_22433	447	9.31	Mlig455_026751, Mlig455_051741	Neo: Int S/G2/M Age: Up-Down-Down	USP49	0.967	-	-	-	-	-	0.967	Mlig455_026751 {REF} {Length: 7322} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=118.0]} {Human: ENSG00000164663, USP49, ubiquitin specific peptidase 49, [Score=52.0, Expect=4e-06]; ENSG00000140455, USP3, ubiquitin specific peptidase 3, [Score=52.0, Expect=3e-06]} {Mouse: ENSMUSG00000053483, Usp21, ubiquitin specific peptidase 21, [Score=50.1, Expect=9e-06]; ENSMUSG00000090115, Usp49, ubiquitin specific peptidase 49, [Score=49.7, Expect=1e-05]; ENSMUSG00000032376, Usp3, ubiquitin specific peptidase 3, [Score=49.3, Expect=1e-05]} {RNA1509_14174} {RNA1310_11133, RNA1509_14174} {RNA1509_14174, RNA815_3873.1} Mlig455_051741 {REF} {Length: 7065} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=118.3]} {Human: ENSG00000164663, USP49, ubiquitin specific peptidase 49, [Score=52.8, Expect=2e-06]; ENSG00000140455, USP3, ubiquitin specific peptidase 3, [Score=52.0, Expect=2e-06]} {Mouse: ENSMUSG00000053483, Usp21, ubiquitin specific peptidase 21, [Score=50.4, Expect=6e-06]; ENSMUSG00000090115, Usp49, ubiquitin specific peptidase 49, [Score=49.7, Expect=1e-05]; ENSMUSG00000032376, Usp3, ubiquitin specific peptidase 3, [Score=49.3, Expect=1e-05]} {RNA1509_14174, RNA1509_41159} {RNA1310_11133, RNA1509_41159} {RNA1509_41159, RNA815_3873.1}
7.	MligTC455_42827	161	3.36	Mlig455_040618, Mlig455_040628	Neo: - Age: logFC(26M/2M)=-0.538	WDR26	0.966	-	-	-	-	-	0.966	Mlig455_040618 {REF} {Length: 3504} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=63.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=36.6]} {Human: ENSG00000162923, WDR26, WD repeat domain 26, [RH, Score=418, Expect=3e-138]} {Mouse: ENSMUSG00000038733, Wdr26, WD repeat domain 26, [RH, Score=427, Expect=2e-142]} {Dmel: FBgn0037094, CG7611, [RH, Score=392, Expect=9e-129]} {Celegans: WBGene00010572, wdr-5.2, WD repeat-containing protein wdr-5.2, [Score=68.6, Expect=4e-12]} {Smed: dd_Smed_v6_6611_0_1, dd_Smed_v6_6611_0_1, [RH, Score=228, Expect=8e-66]} {RNA1509_20107} {RNA1310_14508.1} {RNA815_16830} Mlig455_040628 {REF} {Length: 1585} {Pfam: WD domain, G-beta repeat [PF00400.34, score=28.2]} {Human: ENSG00000162923, WDR26, WD repeat domain 26, [Score=134, Expect=6e-33]} {Mouse: ENSMUSG00000038733, Wdr26, WD repeat domain 26, [Score=134, Expect=3e-33]} {Dmel: FBgn0037094, CG7611, [Score=127, Expect=4e-31]} {Smed: dd_Smed_v6_6611_0_1, dd_Smed_v6_6611_0_1, [Score=79.3, Expect=2e-15]} {RNA1509_20107} {RNA1310_14508.1} {RNA815_16830}
8.	MligTC455_17648	1703	35.48	Mlig455_047653	Neo: - Age: -	PPP3CA	0.952	-	-	-	-	0.952	-	Mlig455_047653 {REF} {Length: 4216} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=129.1]} {Human: ENSG00000138814, PPP3CA, protein phosphatase 3 catalytic subunit alpha, [RH, Score=824, Expect=0.0]; ENSG00000107758, PPP3CB, protein phosphatase 3 catalytic subunit beta, [RH, Score=810, Expect=0.0]; ENSG00000120910, PPP3CC, protein phosphatase 3 catalytic subunit gamma, [RH, Score=803, Expect=0.0]} {Mouse: ENSMUSG00000028161, Ppp3ca, protein phosphatase 3, catalytic subunit, alpha isoform, [RH, Score=823, Expect=0.0]; ENSMUSG00000021816, Ppp3cb, protein phosphatase 3, catalytic subunit, beta isoform, [RH, Score=810, Expect=0.0]; ENSMUSG00000022092, Ppp3cc, protein phosphatase 3, catalytic subunit, gamma isoform, [RH, Score=790, Expect=0.0]} {Dmel: FBgn0011826, Pp2B-14D, Protein phosphatase 2B at 14D, [RH, Score=820, Expect=0.0]} {Celegans: WBGene00006527, tax-6, Serine/threonine-protein phosphatase 2B catalytic subunit, [RH, Score=758, Expect=0.0]} {Smed: dd_Smed_v6_2045_0_1, dd_Smed_v6_2045_0_1, [RH, Score=670, Expect=0.0]} {RNA1509_3236} {RNA1310_3919.1} {RNA815_3119.1}
9.	MligTC455_14501	55	1.15	Mlig455_047255	Neo: Int S/G2/M Age: - Region-enriched R5: 2.570/0.00646		0.95	-	-	-	-	-	0.950	Mlig455_047255 {REF} {Length: 1057} {TRANSSPLICED} {RNA1509_21707, RNA1509_56030} {RNA1310_23619, RNA1509_21707, RNA1509_56030} {RNA1509_21707, RNA1509_56030, RNA815_11671}
10.	MligTC455_31950	515	10.73	Mlig455_034849	Neo: - Age: -	KCTD1	0.95	-	-	-	-	-	0.950	Mlig455_034849 {REF} {Length: 3140} {TRANSSPLICED} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=68.2, Expect=9e-12]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=68.6, Expect=4e-12]} {RNA1509_44313} {RNA1310_16403.1} {RNA815_10559.1}

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