TomoSeq data search

Data search

Results for MligTC455_27433

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27433	182	3.78	Mlig455_012707	Neo: - Age: logFC(26M/2M)=-0.487	TRERF1	Mlig455_012707 {REF} {Length: 6713} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=63.8]; C2H2-type zinc finger [PF13894.8, score=37.0]; ELM2 domain [PF01448.26, score=27.9]; Zinc-finger double domain [PF13465.8, score=25.8]; C2H2-type zinc finger [PF13912.8, score=23.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.3]} {Human: ENSG00000124496, TRERF1, transcriptional regulating factor 1, [RH, Score=118, Expect=2e-26]; ENSG00000118156, ZNF541, zinc finger protein 541, [RH, Score=115, Expect=3e-25]} {Mouse: ENSMUSG00000116235, Trerf1, transcriptional regulating factor 1, [RH, Score=118, Expect=2e-26]; ENSMUSG00000078796, Zfp541, zinc finger protein 541, [RH, Score=114, Expect=4e-25]} {Dmel: FBgn0037698, CG16779, [RH, Score=124, Expect=3e-28]} {Celegans: WBGene00010012, saeg-1, Suppressor of activated egl-4 protein 1, [RH, Score=119, Expect=3e-27]} {Smed: dd_Smed_v6_6649_0_1, dd_Smed_v6_6649_0_1, [RH, Score=198, Expect=1e-51]} {RNA1509_22271} {RNA1310_15660} {RNA815_14217}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27433

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.462	2.613	0.80338	1.00000
RegionR2	1.119	2.613	0.15836	0.49804
RegionR3	0.153	2.613	0.78669	1.00000
RegionR4	-0.294	2.613	0.72692	1.00000
RegionR5	0.159	2.613	0.75183	1.00000
RegionR6	0.266	2.613	0.66397	1.00000
RegionR7	-0.411	2.613	0.58314	1.00000
RegionR8	-0.53	2.613	0.56515	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.01	2.613	0.50843	1.00000
RegenerationR2	-0.478	2.613	0.42396	0.83023
RegenerationR3	0.771	2.613	0.28077	0.71319
RegenerationR4	0.315	2.613	0.69701	0.95242
RegenerationR5	-0.322	2.613	0.61516	0.91670
RegenerationR6	-1.186	2.613	0.16841	0.49887
RegenerationBL	0.137	2.613	0.90446	1.00000
RegenerationTP	-0.991	2.613	0.41262	0.83876

Genes with expression patterns similar to MligTC455_27433

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27433	182	3.78	Mlig455_012707	Neo: - Age: logFC(26M/2M)=-0.487	TRERF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012707 {REF} {Length: 6713} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=63.8]; C2H2-type zinc finger [PF13894.8, score=37.0]; ELM2 domain [PF01448.26, score=27.9]; Zinc-finger double domain [PF13465.8, score=25.8]; C2H2-type zinc finger [PF13912.8, score=23.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.3]} {Human: ENSG00000124496, TRERF1, transcriptional regulating factor 1, [RH, Score=118, Expect=2e-26]; ENSG00000118156, ZNF541, zinc finger protein 541, [RH, Score=115, Expect=3e-25]} {Mouse: ENSMUSG00000116235, Trerf1, transcriptional regulating factor 1, [RH, Score=118, Expect=2e-26]; ENSMUSG00000078796, Zfp541, zinc finger protein 541, [RH, Score=114, Expect=4e-25]} {Dmel: FBgn0037698, CG16779, [RH, Score=124, Expect=3e-28]} {Celegans: WBGene00010012, saeg-1, Suppressor of activated egl-4 protein 1, [RH, Score=119, Expect=3e-27]} {Smed: dd_Smed_v6_6649_0_1, dd_Smed_v6_6649_0_1, [RH, Score=198, Expect=1e-51]} {RNA1509_22271} {RNA1310_15660} {RNA815_14217}
2.	MligTC455_18107	112	2.33	Mlig455_067898	Neo: - Age: - Region-enriched R2: 4.389/0.00558	C7orf31	0.986	-	-	0.986	-	-	-	Mlig455_067898 {REF} {Length: 3011} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4555) [PF15093.8, score=96.1]} {Human: ENSG00000153790, C7orf31, chromosome 7 open reading frame 31, [RH, Score=114, Expect=1e-25]} {Mouse: ENSMUSG00000029828, 4921507P07Rik, RIKEN cDNA 4921507P07 gene, [RH, Score=107, Expect=8e-24]} {RNA1509_34630} {RNA1310_4450, RNA1509_34630} {RNA1509_34630, RNA815_12248}
3.	MligTC455_12639	27	0.56	Mlig455_015947	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_015947 {REF} {Length: 147} {NoTransDecoderORF} {RNA1509_47726} {RNA1310_33943}
4.	MligTC455_25755	59	1.24	Mlig455_006038, Mlig455_055389	Neo: - Age: Up-Down-Down		0.968	-	-	-	-	0.968	-	Mlig455_006038 {REF} {Length: 211} {NoTransDecoderORF} {RNA1509_18220} {RNA1310_20249} {RNA815_11842.1} Mlig455_055389 {REF} {Length: 5005} {RNA1509_26204} {RNA1310_7137} {RNA815_17475}
5.	MligTC455_19837	100	2.07	Mlig455_050340	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_050340 {REF} {Length: 2400} {Pfam: Laminin G domain [PF02210.26, score=22.2]} {Mouse: ENSMUSG00000038048, Cntnap5c, contactin associated protein-like 5C, [Score=56.2, Expect=4e-08]; ENSMUSG00000070695, Cntnap5a, contactin associated protein-like 5A, [Score=54.7, Expect=1e-07]} {RNA1509_35128} {RNA1310_8604} {RNA815_4859}
6.	MligTC455_24684	123	2.56	Mlig455_071054	Neo: - Age: Down-Up-Down		0.966	-	-	0.966	-	-	-	Mlig455_071054 {REF} {Length: 3813} {RNA1509_27926, RNA1509_56601} {RNA1310_12159, RNA1509_27926, RNA1509_56601} {RNA1509_27926, RNA1509_56601, RNA815_17354}
7.	MligTC455_34544	22	0.47	Mlig455_029406	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_029406 {REF} {Length: 2118} {RNA1509_49846} {RNA1310_39189} {RNA815_32261}
8.	MligTC455_17181	23	0.48	Mlig455_036265, Mlig455_055388	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.189		0.965	-	-	-	-	0.965	-	Mlig455_036265 {REF} {Length: 1043} {Pfam: THAP domain [PF05485.14, score=43.7]} {Mouse: ENSMUSG00000039759, Thap3, THAP domain containing, apoptosis associated protein 3, [Score=46.2, Expect=6e-06]} {Dmel: FBgn0032730, CG10431, [Score=52.0, Expect=1e-07]} {RNA1509_30365} {RNA1310_20272} {RNA815_52972} Mlig455_055388 {REF} {Length: 1047} {Pfam: THAP domain [PF05485.14, score=43.7]} {Mouse: ENSMUSG00000039759, Thap3, THAP domain containing, apoptosis associated protein 3, [Score=46.2, Expect=6e-06]} {Dmel: FBgn0032730, CG10431, [Score=52.0, Expect=1e-07]} {RNA1509_30365} {RNA1310_20272} {RNA815_52972}
9.	MligTC455_33846	138	2.87	Mlig455_061676	Neo: - Age: Up-Up-Down Region-enriched R2: 2.874/0.04108	DHX58	0.963	-	-	-	-	-	0.963	Mlig455_061676 {REF} {Length: 10368} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=177.8]; Type III restriction enzyme, res subunit [PF04851.17, score=46.5]; DEAD/DEAH box helicase [PF00270.31, score=46.4]; Helicase conserved C-terminal domain [PF00271.33, score=45.8]} {Human: ENSG00000108771, DHX58, DExH-box helicase 58, [Score=116, Expect=5e-26]} {Mouse: ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [Score=114, Expect=2e-25]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=117, Expect=4e-26]} {Celegans: WBGene00000939, dcr-1, Endoribonuclease dcr-1, [Score=139, Expect=1e-32]} {Smed: dd_Smed_v6_5587_0_1, dd_Smed_v6_5587_0_1, [Score=160, Expect=5e-40]} {RNA1509_8601} {RNA1310_142} {RNA815_2367}
10.	MligTC455_26318	134	2.79	Mlig455_024957	Neo: Irradiation Age: -	DNAJB4	0.962	-	-	-	-	0.962	-	Mlig455_024957 {REF} {Length: 6556} {Pfam: DnaJ domain [PF00226.33, score=54.8]} {Human: ENSG00000162616, DNAJB4, DnaJ heat shock protein family (Hsp40) member B4, [Score=58.5, Expect=2e-09]; ENSG00000137094, DNAJB5, DnaJ heat shock protein family (Hsp40) member B5, [Score=58.5, Expect=2e-10]; ENSG00000132002, DNAJB1, DnaJ heat shock protein family (Hsp40) member B1, [Score=57.0, Expect=1e-08]} {Mouse: ENSMUSG00000028035, Dnajb4, DnaJ heat shock protein family (Hsp40) member B4, [Score=61.6, Expect=2e-10]} {Dmel: FBgn0002174, l(2)tid, lethal (2) tumorous imaginal discs, [Score=59.7, Expect=8e-10]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=57.0, Expect=3e-09]} {Smed: dd_Smed_v6_11169_0_1, dd_Smed_v6_11169_0_1, [Score=58.2, Expect=4e-10]} {RNA1509_49462} {RNA1310_5233, RNA1509_49462} {RNA1509_49462, RNA815_38818}
11.	MligTC455_09998	21	0.43	Mlig455_035996	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_035996 {REF} {Length: 1046} {NoTransDecoderORF} {RNA1509_40529, RNA1509_45539} {RNA1310_37123, RNA1509_45539} {RNA1509_45539, RNA815_3505.1}
12.	MligTC455_19254	90	1.88	Mlig455_004591	Neo: - Age: -		0.958	-	-	0.958	-	-	-	Mlig455_004591 {REF} {Length: 710} {RNA1509_31473} {RNA1310_57601} {RNA815_20563}
13.	MligTC455_24131	159	3.32	Mlig455_002721	Neo: - Age: -	DNAJA3	0.958	-	-	0.958	-	-	-	Mlig455_002721 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=72.9]} {Human: ENSG00000276726, DNAJA3, DnaJ heat shock protein family (Hsp40) member A3, [Score=64.7, Expect=2e-11]; ENSG00000103423, DNAJA3, DnaJ heat shock protein family (Hsp40) member A3, [Score=64.7, Expect=2e-11]; ENSG00000110011, DNAJC4, DnaJ heat shock protein family (Hsp40) member C4, [Score=63.2, Expect=2e-11]; ENSG00000132002, DNAJB1, DnaJ heat shock protein family (Hsp40) member B1, [Score=61.6, Expect=2e-10]} {Mouse: ENSMUSG00000024963, Dnajc4, DnaJ heat shock protein family (Hsp40) member C4, [RH, Score=63.2, Expect=2e-11]} {Dmel: FBgn0038127, CG8476, [RH, Score=69.7, Expect=6e-14]} {Celegans: WBGene00001022, dnj-4, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=57.4, Expect=1e-09]} {Smed: dd_Smed_v6_7057_0_1, dd_Smed_v6_7057_0_1, [Score=72.4, Expect=5e-15]} {RNA1509_21231} {RNA1310_36701.1} {RNA815_21052}
14.	MligTC455_45486	487	10.14	Mlig455_019746	Neo: - Age: Down-Up-Up	DLG2	0.958	-	-	-	-	-	0.958	Mlig455_019746 {REF} {Length: 3340} {Pfam: Guanylate kinase [PF00625.23, score=164.7]; PDZ domain [PF00595.26, score=69.8]; PDZ domain [PF17820.3, score=37.7]; SH3 domain [PF00018.30, score=33.0]; Variant SH3 domain [PF07653.19, score=27.2]; PDZ domain [PF13180.8, score=22.1]; Variant SH3 domain [PF14604.8, score=20.5]; Procyclic acidic repetitive protein (PARP) [PF05887.13, score=19.1]} {Human: ENSG00000150672, DLG2, discs large MAGUK scaffold protein 2, [RH, Score=427, Expect=6e-141]} {Mouse: ENSMUSG00000052572, Dlg2, discs large MAGUK scaffold protein 2, [RH, Score=426, Expect=1e-140]} {Dmel: FBgn0001624, dlg1, discs large 1, [Score=434, Expect=1e-141]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [RH, Score=343, Expect=9e-107]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [RH, Score=317, Expect=2e-101]} {RNA1509_16120, RNA1509_26114} {RNA1310_2555.1, RNA1509_16120} {RNA1509_16120, RNA815_2319}
15.	MligTC455_52340	34	0.71	Mlig455_012358, Mlig455_012736	Neo: - Age: Up-Down-Up	SCNN1B	0.957	-	-	0.957	-	-	-	Mlig455_012358 {REF} {Length: 3412} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=180.9]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=58.9, Expect=2e-08]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=55.8, Expect=7e-08]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=404, Expect=3e-133]} {RNA1310_40062.1} {RNA815_16192} Mlig455_012736 {REF} {Length: 3026} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=180.6]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=58.9, Expect=2e-08]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=55.8, Expect=7e-08]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=405, Expect=2e-133]} {RNA1310_40062.1} {RNA815_16192}
16.	MligTC455_09105	25	0.52	Mlig455_058944	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.533 Region-enriched R5: 3.843/0.04541		0.956	-	-	0.956	-	-	-	Mlig455_058944 {REF} {Length: 3335} {Pfam: Innexin [PF00876.20, score=290.6]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=70.9, Expect=4e-13]} {Celegans: WBGene00006747, unc-7, Innexin unc-7, [Score=204, Expect=2e-60]} {Smed: dd_Smed_v6_6114_0_3, dd_Smed_v6_6114_0_3, [Score=219, Expect=1e-65]} {RNA1509_23309} {RNA1310_18761} {RNA815_7809.1}
17.	MligTC455_09307	8	0.16	Mlig455_043212	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_043212 {REF} {Length: 373} {Pfam: NHL repeat [PF01436.23, score=23.2]} {RNA1509_15622} {RNA1310_37306} {RNA815_3900.8}
18.	MligTC455_24683	128	2.67	Mlig455_015162	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.671		0.956	-	-	0.956	-	-	-	Mlig455_015162 {REF} {Length: 4283} {RNA1509_27926} {RNA1310_12159} {RNA815_17354}
19.	MligTC455_00592	12	0.24	Mlig455_060795, Mlig455_060824	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_060795 {REF} {Length: 1334} {RNA1310_70154} {RNA815_40465} Mlig455_060824 {REF} {Length: 1577} {RNA1310_70154} {RNA815_40465}
20.	MligTC455_08957	8	0.18	Mlig455_051321	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_051321 {REF} {Length: 473} {NoTransDecoderORF} {RNA1310_104048}
21.	MligTC455_37085	47	0.97	Mlig455_054670	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_054670 {REF} {Length: 4438} {RNA1509_44394} {RNA1310_6796} {RNA815_32860}
22.	MligTC455_32367	163	3.39	Mlig455_056139, Mlig455_058755	Neo: Irradiation Age: logFC(26M/2M)=0.857 Region-enriched R2: 5.313/0.01588 Region-enriched R5: 4.811/0.00002	PI16	0.952	-	-	0.952	-	-	-	Mlig455_056139 {REF} {Length: 1952} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=52.2]} {Human: ENSG00000164530, PI16, peptidase inhibitor 16, [Score=89.7, Expect=7e-19]} {Mouse: ENSMUSG00000020213, Glipr1l1, GLI pathogenesis-related 1 like 1, [Score=88.2, Expect=1e-19]} {Dmel: FBgn0038126, CG8483, [Score=66.2, Expect=1e-11]} {Celegans: WBGene00003055, lon-1, LONg, [RH, Score=80.9, Expect=7e-17]} {Smed: dd_Smed_v6_2021_0_1, dd_Smed_v6_2021_0_1, [RH, Score=138, Expect=8e-36]} {RNA1310_31832.1} {RNA815_50399} Mlig455_058755 {REF} {Length: 1144} {RNA1310_31832.1} {RNA815_50399}