Data search
Results for MligTC455_48454
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48454 | 602 | 12.54 | Mlig455_041932 | Neo: - Age: Down-Up-Down |
CCDC154 | Mlig455_041932 {REF} {Length: 4159} {Pfam: Coiled-coil domain-containing protein 154 [PF15450.8, score=111.7]} {Human: ENSG00000197599, CCDC154, coiled-coil domain containing 154, [Score=94.7, Expect=2e-19]} {Mouse: ENSMUSG00000059562, Ccdc154, coiled-coil domain containing 154, [Score=86.3, Expect=5e-17]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=51.2, Expect=3e-06]} {Smed: dd_Smed_v6_10236_0_1, dd_Smed_v6_10236_0_1, [Score=407, Expect=1e-131]} {RNA1509_37351, RNA1509_5383} {RNA1310_2073.1, RNA1509_37351, RNA1509_5383} {RNA1509_37351, RNA1509_5383, RNA815_2050} |
Cumulative graph for MligTC455_48454
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.218 | 3.82 | 0.81059 | 1.00000 | |
| RegionR2 | 0.426 | 3.82 | 0.38563 | 0.78032 | |
| RegionR3 | 0.223 | 3.82 | 0.60251 | 1.00000 | |
| RegionR4 | 0.136 | 3.82 | 0.78584 | 1.00000 | |
| RegionR5 | -0.515 | 3.82 | 0.25061 | 0.56691 | |
| RegionR6 | 0.359 | 3.82 | 0.41845 | 0.98642 | |
| RegionR7 | 0.455 | 3.82 | 0.36701 | 1.00000 | |
| RegionR8 | -0.866 | 3.82 | 0.25527 | 0.87537 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.96 | 3.82 | 0.02168 | 0.58128 | |
| RegenerationR2 | -0.095 | 3.82 | 0.82628 | 0.99618 | |
| RegenerationR3 | 0.255 | 3.82 | 0.58860 | 0.90317 | |
| RegenerationR4 | 0.207 | 3.82 | 0.67698 | 0.94453 | |
| RegenerationR5 | 0.405 | 3.82 | 0.40554 | 0.80261 | |
| RegenerationR6 | -0.616 | 3.82 | 0.23838 | 0.58595 | |
| RegenerationBL | -0.865 | 3.82 | 0.16707 | 0.48989 | |
| RegenerationTP | -0.263 | 3.82 | 0.69008 | 1.00000 |
Genes with expression patterns similar to MligTC455_48454
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48454 | 602 | 12.54 | Mlig455_041932 | Neo: - Age: Down-Up-Down |
CCDC154 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041932 {REF} {Length: 4159} {Pfam: Coiled-coil domain-containing protein 154 [PF15450.8, score=111.7]} {Human: ENSG00000197599, CCDC154, coiled-coil domain containing 154, [Score=94.7, Expect=2e-19]} {Mouse: ENSMUSG00000059562, Ccdc154, coiled-coil domain containing 154, [Score=86.3, Expect=5e-17]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=51.2, Expect=3e-06]} {Smed: dd_Smed_v6_10236_0_1, dd_Smed_v6_10236_0_1, [Score=407, Expect=1e-131]} {RNA1509_37351, RNA1509_5383} {RNA1310_2073.1, RNA1509_37351, RNA1509_5383} {RNA1509_37351, RNA1509_5383, RNA815_2050} |
| 2. | MligTC455_27841 | 1118 | 23.3 | Mlig455_021442, Mlig455_037900 | Neo: - Age: - Regeneration-upregulated BL: 4.099 Regeneration-enriched BL: 4.099 |
1.815 | 0.976 | - | - | - | 0.839 | - | Mlig455_021442 {REF} {Length: 2929} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} Mlig455_037900 {REF} {Length: 3423} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} |
|
| 3. | MligTC455_27842 | 1017 | 21.19 | Mlig455_021051, Mlig455_052351 | Neo: - Age: Down-Down-Up Regeneration-enriched TP: 4.635 |
1.789 | 0.959 | - | - | - | 0.830 | - | Mlig455_021051 {REF} {Length: 11271} {Pfam: Zinc knuckle [PF00098.25, score=18.6]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_052351 {REF} {Length: 9553} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} |
|
| 4. | MligTC455_40318 | 4414 | 91.96 | Mlig455_056386 | Neo: - Age: - |
LRRC23 | 1.726 | - | - | 0.950 | - | 0.776 | - | Mlig455_056386 {REF} {Length: 1457} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=98.6]; Leucine-rich repeat [PF14580.8, score=60.6]; Leucine rich repeat [PF13855.8, score=58.7]; Leucine Rich repeat [PF13516.8, score=38.0]; Leucine Rich Repeat [PF00560.35, score=23.0]} {Human: ENSG00000010626, LRRC23, leucine rich repeat containing 23, [RH, Score=288, Expect=4e-95]} {Mouse: ENSMUSG00000030125, Lrrc23, leucine rich repeat containing 23, [RH, Score=321, Expect=2e-108]} {Dmel: FBgn0085440, Lgr4, Leucine-rich repeat-containing G protein-coupled receptor 4, [Score=54.3, Expect=1e-07]} {Celegans: WBGene00015516, C06A8.6, [Score=102, Expect=1e-24]} {Smed: dd_Smed_v6_8299_0_1, dd_Smed_v6_8299_0_1, [RH, Score=286, Expect=9e-95]} {RNA1509_2421} {RNA1310_22202.1} {RNA815_8780.1} |
| 5. | MligTC455_45702 | 777 | 16.19 | Mlig455_008333 | Neo: - Age: logFC(26M/2M)=-0.568 |
ADAM12 | 1.682 | - | - | 0.957 | 0.725 | - | - | Mlig455_008333 {REF} {Length: 3197} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=123.0]; Disintegrin [PF00200.25, score=72.7]; Metallo-peptidase family M12 [PF13688.8, score=51.8]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=42.1]; ADAM cysteine-rich [PF08516.14, score=40.6]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=38.9]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=38.3]} {Human: ENSG00000148848, ADAM12, ADAM metallopeptidase domain 12, [Score=236, Expect=1e-64]; ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [Score=231, Expect=3e-64]; ENSG00000149451, ADAM33, ADAM metallopeptidase domain 33, [Score=229, Expect=4e-63]} {Mouse: ENSMUSG00000054555, Adam12, a disintegrin and metallopeptidase domain 12 (meltrin alpha), [Score=228, Expect=2e-62]; ENSMUSG00000014725, Adam28, a disintegrin and metallopeptidase domain 28, [Score=226, Expect=5e-62]; ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [Score=225, Expect=1e-61]} {Dmel: FBgn0265140, Meltrin, [Score=250, Expect=7e-70]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [Score=216, Expect=2e-58]} {Smed: dd_Smed_v6_5143_0_1, dd_Smed_v6_5143_0_1, [Score=231, Expect=6e-63]} {RNA1509_7145} {RNA1310_4464.1, RNA1509_7145} {RNA1509_7145, RNA815_1440.1} |
| 6. | MligTC455_25167 | 113 | 2.36 | Mlig455_052954, Mlig455_061057 | Neo: - Age: - |
CLIP3 | 1.67 | 0.951 | - | - | 0.719 | - | - | Mlig455_052954 {REF} {Length: 2739} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=231.4]; Ankyrin repeats (3 copies) [PF12796.9, score=47.5]; Ankyrin repeat [PF00023.32, score=28.7]; Ankyrin repeats (many copies) [PF13637.8, score=26.0]} {Human: ENSG00000105270, CLIP3, CAP-Gly domain containing linker protein 3, [RH, Score=226, Expect=1e-65]} {Mouse: ENSMUSG00000013921, Clip3, CAP-GLY domain containing linker protein 3, [RH, Score=223, Expect=8e-65]} {Dmel: FBgn0020503, CLIP-190, Cytoplasmic linker protein 190, [Score=145, Expect=5e-36]} {Celegans: WBGene00009987, tbcb-1, Tubulin-specific chaperone B, [Score=64.3, Expect=2e-11]} {Smed: dd_Smed_v6_6540_0_1, dd_Smed_v6_6540_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_29697} {RNA1310_15773} {RNA815_18829} Mlig455_061057 {REF} {Length: 372} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=37.2]} {RNA1509_26416} {RNA1310_51603} {RNA815_10138} |
| 7. | MligTC455_31774 | 176 | 3.67 | Mlig455_026213, Mlig455_026264 | Neo: - Age: logFC(26M/2M)=-0.400 |
TRIM2, TRIM3 | 1.661 | - | - | - | 0.707 | - | 0.954 | Mlig455_026213 {REF} {Length: 2329} {Pfam: NHL repeat [PF01436.23, score=21.9]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=57.0, Expect=7e-08]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=55.1, Expect=3e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=56.6, Expect=5e-08]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=55.1, Expect=2e-07]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} Mlig455_026264 {REF} {Length: 2271} {Pfam: NHL repeat [PF01436.23, score=32.6]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=61.6, Expect=2e-09]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=60.5, Expect=5e-09]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=60.8, Expect=3e-09]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=60.5, Expect=4e-09]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} |
| 8. | MligTC455_53107 | 399 | 8.31 | Mlig455_064007, Mlig455_064048 | Neo: - |
CALM1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_064007 {REF} {Length: 822} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=120.8]; EF-hand domain pair [PF13499.8, score=117.4]; EF-hand domain pair [PF13833.8, score=95.4]; EF-hand domain [PF13405.8, score=90.8]; EF hand [PF13202.8, score=88.8]; EF-hand domain [PF14658.8, score=61.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=44.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.6]; Caleosin related protein [PF05042.15, score=20.6]; Dockerin type I domain [PF00404.20, score=20.0]; Family of unknown function (DUF5580) [PF17743.3, score=17.5]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=211, Expect=1e-70]; ENSG00000160014, CALM3, calmodulin 3, [Score=211, Expect=1e-70]; ENSG00000143933, CALM2, calmodulin 2, [Score=211, Expect=1e-70]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=211, Expect=8e-71]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=211, Expect=8e-71]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=211, Expect=8e-71]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=202, Expect=2e-67]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=212, Expect=2e-71]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=212, Expect=2e-71]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=212, Expect=2e-71]} {RNA1509_31589} {RNA1310_15824} {RNA815_18405} Mlig455_064048 {REF} {Length: 818} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=120.8]; EF-hand domain pair [PF13499.8, score=117.4]; EF-hand domain pair [PF13833.8, score=95.4]; EF-hand domain [PF13405.8, score=90.8]; EF hand [PF13202.8, score=88.8]; EF-hand domain [PF14658.8, score=61.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=44.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.6]; Caleosin related protein [PF05042.15, score=20.6]; Dockerin type I domain [PF00404.20, score=20.0]; Family of unknown function (DUF5580) [PF17743.3, score=17.5]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=211, Expect=1e-70]; ENSG00000160014, CALM3, calmodulin 3, [Score=211, Expect=1e-70]; ENSG00000143933, CALM2, calmodulin 2, [Score=211, Expect=1e-70]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=211, Expect=8e-71]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=211, Expect=8e-71]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=211, Expect=8e-71]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=202, Expect=2e-67]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=212, Expect=2e-71]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=212, Expect=2e-71]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=212, Expect=2e-71]} {RNA1509_31589} {RNA1310_15824, RNA1509_31589} {RNA1509_31589, RNA815_18405} |
| 9. | MligTC455_52894 | 103 | 2.15 | Mlig455_055947 | Neo: - Age: Down-Down-Up |
ANK3 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_055947 {REF} {Length: 3569} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=82.2]; Ankyrin repeats (many copies) [PF13637.8, score=78.5]; Ankyrin repeats (many copies) [PF13857.8, score=77.2]; Ankyrin repeat [PF13606.8, score=52.9]; Ankyrin repeat [PF00023.32, score=49.9]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=64.7, Expect=8e-10]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=61.2, Expect=6e-09]} {Dmel: FBgn0040372, G9a, [Score=61.6, Expect=4e-09]} {Celegans: WBGene00015646, mlt-10, [RH, Score=181, Expect=2e-47]} {Smed: dd_Smed_v6_9418_0_1, dd_Smed_v6_9418_0_1, [Score=106, Expect=7e-24]} {RNA1509_25185} {RNA1310_8316} {RNA815_7052} |
| 10. | MligTC455_40424 | 474 | 9.88 | Mlig455_029322 | Neo: - |
CALM2 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_029322 {REF} {Length: 1020} {Pfam: EF-hand domain pair [PF13833.8, score=26.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=69.7, Expect=2e-14]; ENSG00000160014, CALM3, calmodulin 3, [Score=68.9, Expect=2e-14]; ENSG00000198668, CALM1, calmodulin 1, [Score=68.9, Expect=2e-14]; ENSG00000178363, CALML3, calmodulin like 3, [Score=68.2, Expect=3e-14]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=70.5, Expect=1e-14]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=68.9, Expect=1e-14]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=68.9, Expect=1e-14]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=67.4, Expect=3e-14]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=67.8, Expect=2e-14]} {RNA1509_16604} {RNA1310_33121} {RNA815_17390} |
| 11. | MligTC455_47339 | 2585 | 53.86 | Mlig455_021460 | Neo: - Age: Down-Down-Up |
0.955 | - | - | 0.955 | - | - | - | Mlig455_021460 {REF} {Length: 3876} {RNA1509_11352, RNA1509_20750, RNA1509_29036} {RNA1310_46975.2, RNA1509_11352, RNA1509_20750} {RNA1509_11352, RNA1509_20750, RNA815_43340} | |
| 12. | MligTC455_36497 | 307 | 6.4 | Mlig455_027376 | Neo: - Age: - |
ANKRD28 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_027376 {REF} {Length: 4258} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=387.1]; Ankyrin repeats (many copies) [PF13637.8, score=338.0]; Ankyrin repeat [PF00023.32, score=278.6]; Ankyrin repeats (many copies) [PF13857.8, score=266.3]; Ankyrin repeat [PF13606.8, score=249.8]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=572, Expect=0.0]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=550, Expect=2e-177]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=573, Expect=0.0]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=231, Expect=5e-61]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=211, Expect=3e-55]} {Smed: dd_Smed_v6_7952_0_1, dd_Smed_v6_7952_0_1, [Score=392, Expect=6e-118]} {RNA1509_34578} {RNA1310_5778.1, RNA1509_34578} {RNA1509_34578, RNA815_24866} |