M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_28600

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28600 90 1.88 Mlig455_010981

Neo: -

Age: -

 Mlig455_010981 {REF} {Length: 5815} {RNA1509_37486} {RNA1310_30004.1} {RNA815_31633}

Cumulative graph for MligTC455_28600

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.965 1.675 0.99991 1.00000
RegionR2 3.608 1.675 0.04405 0.24645
RegionR3 -0.029 1.675 1.00000 1.00000
RegionR4 -1.672 1.675 0.99969 1.00000
RegionR5 1.406 1.675 0.28117 0.60971
RegionR6 2.303 1.675 0.12851 0.64882
RegionR7 2.762 1.675 0.10381 0.61286
RegionR8 -3.414 1.675 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.382 1.675 0.99998 1.00000
RegenerationR2 1.033 1.675 0.35849 0.78802
RegenerationR3 3.553 1.675 0.04237 0.36026
RegenerationR4 4.507 1.675 0.00247 0.06405
RegenerationR5 2.956 1.675 0.02129 0.25264
RegenerationR6 1.351 1.675 0.36404 0.70787
RegenerationBL 3.19 1.675 0.09905 0.36993
RegenerationTP 4.905 1.675 0.02007 0.24295


Genes with expression patterns similar to MligTC455_28600

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28600 90 1.88 Mlig455_010981

Neo: -

Age: -

 4 - - 1.000 1.000 1.000 1.000 Mlig455_010981 {REF} {Length: 5815} {RNA1509_37486} {RNA1310_30004.1} {RNA815_31633}
2. MligTC455_49936 134 2.79 Mlig455_025477, Mlig455_033596

Neo: -

Age: Down-Up-Down

Region-enriched R3: 2.907/0.03091

 2.577 - - - 0.909 0.953 0.715

Mlig455_025477 {REF} {Length: 934} {RNA1310_65296} {RNA815_34444}

Mlig455_033596 {REF} {Length: 936} {RNA1310_65296} {RNA815_34444}
3. MligTC455_27800 102 2.12 Mlig455_016297

Neo: -

Age: Down-Down-Up

 1.893 - - 0.984 - 0.909 - Mlig455_016297 {REF} {Length: 4934} {RNA1509_52468} {RNA1310_42461} {RNA815_10757}
4. MligTC455_22542 99 2.06 Mlig455_024204

Neo: -

Age: logFC(26M/2M)=-0.480

 1.722 - - - 0.769 0.953 - Mlig455_024204 {REF} {Length: 3023} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=139.9]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=59.3, Expect=8e-09]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=102, Expect=2e-22]} {RNA1509_39836} {RNA1310_9102.1, RNA1509_39836} {RNA1509_39836, RNA815_18669}
5. MligTC455_23491 83 1.73 Mlig455_059101

Neo: -

Age: -

 1.683 - - - 0.959 0.724 - Mlig455_059101 {REF} {Length: 2808} {TRANSSPLICED} {RNA1509_38122} {RNA1310_8876.1} {RNA815_14615.1}
6. MligTC455_24671 92 1.91 Mlig455_014396

Neo: -

Age: -

 TRHR 1.679 - - 0.726 0.953 - - Mlig455_014396 {REF} {Length: 1582} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=63.3]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=28.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.0]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=54.3, Expect=2e-07]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=53.1, Expect=3e-07]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=68.2, Expect=4e-12]} {Smed: dd_Smed_v6_24805_0_1, dd_Smed_v6_24805_0_1, [RH, Score=216, Expect=1e-66]} {RNA1310_20543} {RNA815_8393}
7. MligTC455_54347 206 4.29 Mlig455_061086

Neo: -

Age: -

 ULK1 0.98 - - - 0.980 - - Mlig455_061086 {REF} {Length: 7837} {Pfam: Protein kinase domain [PF00069.27, score=98.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=65.6]; Fungal protein kinase [PF17667.3, score=25.3]} {Human: ENSG00000177169, ULK1, unc-51 like autophagy activating kinase 1, [Score=77.8, Expect=2e-14]; ENSG00000083290, ULK2, unc-51 like autophagy activating kinase 2, [Score=75.9, Expect=8e-14]; ENSG00000197168, NEK5, NIMA related kinase 5, [Score=75.1, Expect=1e-13]} {Mouse: ENSMUSG00000029512, Ulk1, unc-51 like kinase 1, [Score=77.8, Expect=1e-14]} {Dmel: FBgn0001079, fu, fused, [Score=74.3, Expect=9e-14]} {Celegans: WBGene00004044, plk-3, Serine/threonine-protein kinase plk-3, [Score=72.4, Expect=3e-13]} {Smed: dd_Smed_v6_5138_0_1, dd_Smed_v6_5138_0_1, [Score=73.6, Expect=9e-14]} {RNA1509_14320, RNA1509_47696, RNA1509_59722} {RNA1310_3761, RNA1509_47696, RNA1509_59722} {RNA1509_47696, RNA1509_59722, RNA815_1143}
8. MligTC455_42793 226 4.7 Mlig455_050974

Neo: -

Age: -

 WTAP 0.978 - - 0.978 - - - Mlig455_050974 {REF} {Length: 1345} {TRANSSPLICED} {Pfam: WTAP/Mum2p family [PF17098.7, score=159.6]} {Human: ENSG00000146457, WTAP, WT1 associated protein, [RH, Score=154, Expect=2e-44]} {Mouse: ENSMUSG00000060475, Wtap, Wilms tumour 1-associating protein, [RH, Score=154, Expect=1e-44]} {Dmel: FBgn0000662, fl(2)d, female lethal d, [RH, Score=160, Expect=7e-46]} {Smed: dd_Smed_v6_2322_0_4, dd_Smed_v6_2322_0_4, [RH, Score=151, Expect=3e-42]} {RNA1509_18776, RNA1509_34568} {RNA1310_27242, RNA1509_18776, RNA1509_34568} {RNA1509_18776, RNA1509_34568, RNA815_24536}
9. MligTC455_17266 62 1.3 Mlig455_043650

Neo: -

Age: -

 0.975 - - - 0.975 - - Mlig455_043650 {REF} {Length: 2826} {RNA1310_48878} {RNA815_25527}
10. MligTC455_32799 248 5.16 Mlig455_058551

Neo: Int S/G2/M

Age: Down-Up-Down

 0.974 - - - 0.974 - - Mlig455_058551 {REF} {Length: 2723} {TRANSSPLICED} {RNA1509_21425, RNA1509_22662, RNA1509_30808, RNA1509_44899, RNA1509_50201} {RNA1310_22057, RNA1509_21425, RNA1509_22662, RNA1509_30808, RNA1509_44899, RNA1509_50201} {RNA1509_21425, RNA1509_22662, RNA1509_30808, RNA1509_44899, RNA1509_50201, RNA815_23554.1}
11. MligTC455_50542 61 1.28 Mlig455_033117

Neo: -

Age: logFC(26M/2M)=-1.103

 NFIA 0.974 - - - 0.974 - - Mlig455_033117 {REF} {Length: 3593} {Human: ENSG00000162599, NFIA, nuclear factor I A, [Score=85.1, Expect=1e-16]; ENSG00000147862, NFIB, nuclear factor I B, [Score=84.0, Expect=2e-16]; ENSG00000008441, NFIX, nuclear factor I X, [Score=82.4, Expect=8e-16]; ENSG00000141905, NFIC, nuclear factor I C, [Score=81.6, Expect=1e-15]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [Score=84.3, Expect=6e-17]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [Score=84.3, Expect=1e-16]; ENSMUSG00000055053, Nfic, nuclear factor I/C, [Score=82.8, Expect=2e-16]; ENSMUSG00000001911, Nfix, nuclear factor I/X, [Score=81.3, Expect=1e-15]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=84.3, Expect=1e-16]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=90.5, Expect=1e-18]} {Smed: dd_Smed_v6_12312_0_1, dd_Smed_v6_12312_0_1, [Score=151, Expect=1e-37]} {RNA1310_40008.1} {RNA815_37863}
12. MligTC455_34533 317 6.61 Mlig455_043101, Mlig455_043112

Neo: -

Age: -

 CASP2 0.973 - - 0.973 - - -

Mlig455_043101 {REF} {Length: 3060} {TRANSSPLICED} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=48.1, Expect=5e-06]} {RNA1509_8195} {RNA1310_3988} {RNA815_1585}

Mlig455_043112 {REF} {Length: 3062} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=108.6]} {Human: ENSG00000106144, CASP2, caspase 2, [Score=84.7, Expect=1e-16]} {Mouse: ENSMUSG00000029863, Casp2, caspase 2, [Score=84.7, Expect=7e-17]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=90.9, Expect=1e-19]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=91.3, Expect=4e-20]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=73.9, Expect=2e-14]} {RNA1509_8195} {RNA1310_3988, RNA1509_8195} {RNA1509_8195, RNA815_1585}
13. MligTC455_11783 101 2.1 Mlig455_025464

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_025464 {REF} {Length: 1208} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_30520.2} {RNA815_25802}
14. MligTC455_34561 32 0.66 Mlig455_029143

Neo: -

Age: Up-Down-Down

 GLRA3 0.971 - - - - 0.971 - Mlig455_029143 {REF} {Length: 7433} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=120.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=70.3]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=218, Expect=1e-65]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=213, Expect=1e-63]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=217, Expect=5e-65]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=211, Expect=3e-63]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=207, Expect=3e-61]} {Dmel: FBgn0024963, GluClalpha, [Score=212, Expect=1e-63]} {Celegans: WBGene00001591, glc-1, Glutamate-gated chloride channel alpha, [Score=190, Expect=3e-55]} {Smed: dd_Smed_v6_14666_0_1, dd_Smed_v6_14666_0_1, [Score=204, Expect=7e-61]} {RNA1509_39008} {RNA1310_37356} {RNA815_55517}
15. MligTC455_44910 1185 24.68 Mlig455_014380

Neo: -

Age: Down-Up-Up

 0.971 - - - - 0.971 - Mlig455_014380 {REF} {Length: 2014} {RNA1509_23540} {RNA1310_33807, RNA1509_23540} {RNA1509_23540, RNA815_16127}
16. MligTC455_16983 56 1.17 Mlig455_065034

Neo: -

Age: -

 0.97 - - - 0.970 - - Mlig455_065034 {REF} {Length: 1689} {Pfam: Glycine rich protein [PF12810.9, score=30.9]} {RNA1310_53101} {RNA815_30313.1}
17. MligTC455_26371 80 1.66 Mlig455_037295

Neo: -

Age: -

 DDB1 0.968 - - 0.968 - - - Mlig455_037295 {REF} {Length: 5087} {Pfam: Mono-functional DNA-alkylating methyl methanesulfonate N-term [PF10433.11, score=295.5]} {Human: ENSG00000167986, DDB1, damage specific DNA binding protein 1, [Score=606, Expect=0.0]} {Mouse: ENSMUSG00000024740, Ddb1, damage specific DNA binding protein 1, [Score=610, Expect=0.0]} {Dmel: FBgn0260962, pic, piccolo, [Score=550, Expect=5e-180]} {Celegans: WBGene00010890, ddb-1, DNA damage-binding protein 1, [Score=379, Expect=1e-115]} {Smed: dd_Smed_v6_4952_0_1, dd_Smed_v6_4952_0_1, [Score=384, Expect=2e-116]} {RNA1509_6460} {RNA1310_1777.1} {RNA815_1989}
18. MligTC455_37734 209 4.35 Mlig455_026065, Mlig455_037309

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.415

Region-enriched R2: 3.701/0.01497

 0.968 - - - - 0.968 -

Mlig455_026065 {REF} {Length: 2262} {NoTransDecoderORF} {RNA1509_29718} {RNA1310_43342, RNA1509_29718} {RNA1509_29718, RNA815_21104}

Mlig455_037309 {REF} {Length: 1432} {NoTransDecoderORF} {RNA1509_29718} {RNA1310_43342} {RNA815_21104}
19. MligTC455_42140 434 9.05 Mlig455_039068

Neo: -

Age: -

 CCDC12 0.967 - - - - 0.967 - Mlig455_039068 {REF} {Length: 2152} {TRANSSPLICED} {Pfam: cwf18 pre-mRNA splicing factor [PF08315.14, score=100.2]} {Human: ENSG00000160799, CCDC12, coiled-coil domain containing 12, [RH, Score=97.8, Expect=2e-25]} {Mouse: ENSMUSG00000019659, Ccdc12, coiled-coil domain containing 12, [RH, Score=99.0, Expect=3e-26]} {Dmel: FBgn0039732, CG15525, [RH, Score=100, Expect=9e-27]} {Celegans: WBGene00022092, Y69A2AR.21, [RH, Score=58.5, Expect=6e-11]} {RNA1509_39598} {RNA1310_35228} {RNA815_13463.1}
20. MligTC455_49348 106 2.22 Mlig455_042275

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_042275 {REF} {Length: 1278} {NoTransDecoderORF} {RNA1509_58228} {RNA1310_48769.2} {RNA815_29333}
21. MligTC455_16971 57 1.18 Mlig455_016184

Neo: -

Age: -

 FOXD3 0.965 - - - 0.965 - - Mlig455_016184 {REF} {Length: 2865} {Pfam: Forkhead domain [PF00250.20, score=127.5]} {Human: ENSG00000187140, FOXD3, forkhead box D3, [RH, Score=191, Expect=2e-55]; ENSG00000170122, FOXD4, forkhead box D4, [RH, Score=190, Expect=2e-55]} {Mouse: ENSMUSG00000067261, Foxd3, forkhead box D3, [RH, Score=191, Expect=2e-55]; ENSMUSG00000116152, Foxd3, forkhead box D3, [RH, Score=191, Expect=2e-55]} {Dmel: FBgn0004896, fd59A, forkhead domain 59A, [RH, Score=203, Expect=2e-60]} {Celegans: WBGene00006853, unc-130, [RH, Score=192, Expect=6e-58]} {Smed: dd_Smed_v6_23249_0_1, dd_Smed_v6_23249_0_1, [RH, Score=218, Expect=1e-66]} {RNA1310_61767.1} {RNA815_49318}
22. MligTC455_43345 77 1.6 Mlig455_047797

Neo: -

Age: Up-Down-Down

Regeneration-upregulated BL: 6.463

Regeneration-enriched BL: 6.463

 AARS 0.965 - - - 0.965 - - Mlig455_047797 {REF} {Length: 2939} {Human: ENSG00000090861, AARS, alanyl-tRNA synthetase, [Score=49.3, Expect=2e-06]} {Mouse: ENSMUSG00000031960, Aars, alanyl-tRNA synthetase, [Score=47.8, Expect=6e-06]} {RNA1509_2824} {RNA1310_45009} {RNA815_1373.1}
23. MligTC455_30122 93 1.94 Mlig455_030832

Neo: -

Age: -

 NPFFR2 0.964 - - - - 0.964 - Mlig455_030832 {REF} {Length: 5210} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=176.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=25.4]; Olfactory receptor [PF13853.8, score=23.6]} {Human: ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=158, Expect=2e-43]} {Mouse: ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=155, Expect=3e-42]} {Dmel: FBgn0038880, SIFaR, SIFamide receptor, [RH, Score=199, Expect=2e-56]} {Celegans: WBGene00008278, npr-10, NeuroPeptide Receptor family, [Score=125, Expect=6e-32]} {Smed: dd_Smed_v6_45004_0_1, dd_Smed_v6_45004_0_1, [RH, Score=206, Expect=3e-62]} {RNA1509_19670} {RNA1310_13919, RNA1509_19670} {RNA1509_19670, RNA815_23469.1}
24. MligTC455_32808 28 0.59 Mlig455_035028, Mlig455_053438

Neo: -

Age: -

Region-enriched R2: 7.450/0.04766

 WSCD2 0.964 - - - - 0.964 -

Mlig455_035028 {REF} {Length: 1155} {Pfam: WSC domain [PF01822.21, score=54.3]; PAN domain [PF00024.28, score=21.2]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=48.9, Expect=3e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=47.0, Expect=8e-06]} {RNA1310_133946}

Mlig455_053438 {REF} {Length: 1155} {Pfam: WSC domain [PF01822.21, score=54.3]; PAN domain [PF00024.28, score=21.2]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=48.9, Expect=3e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=47.0, Expect=8e-06]} {RNA1310_133946}
25. MligTC455_30943 42 0.89 Mlig455_068809, Mlig455_068810

Neo: -

Age: Down-Up-Down

 0.963 - - - - 0.963 -

Mlig455_068809 {REF} {Length: 1938} {Pfam: Septin [PF00735.20, score=34.8]; AAA domain [PF13476.8, score=32.1]; 50S ribosome-binding GTPase [PF01926.25, score=31.7]; AIG1 family [PF04548.18, score=25.2]; RsgA GTPase [PF03193.18, score=23.7]; AAA domain [PF13245.8, score=19.9]; ABC transporter [PF00005.29, score=19.8]; Type II/IV secretion system protein [PF00437.22, score=19.8]; AAA domain [PF13401.8, score=19.2]} {Dmel: FBgn0011710, Sep1, Septin 1, [Score=47.8, Expect=1e-05]} {Celegans: WBGene00015956, C18B2.5, [Score=66.6, Expect=1e-11]} {RNA1509_28039} {RNA1310_11027} {RNA815_822.2}

Mlig455_068810 {REF} {Length: 4596} {TRANSSPLICED} {Pfam: AIG1 family [PF04548.18, score=36.0]; Septin [PF00735.20, score=34.3]; 50S ribosome-binding GTPase [PF01926.25, score=30.8]; RsgA GTPase [PF03193.18, score=21.8]; AAA domain [PF13476.8, score=19.4]; Type II/IV secretion system protein [PF00437.22, score=18.2]} {Celegans: WBGene00015956, C18B2.5, [RH, Score=91.3, Expect=1e-18]} {RNA1509_28039} {RNA1310_2622} {RNA815_822.1}
26. MligTC455_11481 34 0.7 Mlig455_039032

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.619

 0.962 - - - - 0.962 - Mlig455_039032 {REF} {Length: 1091} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=49.2]} {RNA1509_55830} {RNA1310_49297} {RNA815_45968}
27. MligTC455_34812 109 2.27 Mlig455_019010

Neo: -

Age: -

 INTS11 0.961 - - - - - 0.961 Mlig455_019010 {REF} {Length: 2959} {TRANSSPLICED} {Pfam: Beta-Casp domain [PF10996.10, score=92.5]; Metallo-beta-lactamase superfamily domain [PF16661.7, score=66.7]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=57.6]; Metallo-beta-lactamase superfamily [PF00753.29, score=47.1]; Beta-lactamase superfamily domain [PF12706.9, score=35.6]} {Human: ENSG00000127054, INTS11, integrator complex subunit 11, [RH, Score=752, Expect=0.0]} {Mouse: ENSMUSG00000029034, Ints11, integrator complex subunit 11, [RH, Score=748, Expect=0.0]} {Dmel: FBgn0039691, IntS11, Integrator 11, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00008642, F10B5.8, [RH, Score=662, Expect=0.0]} {Smed: dd_Smed_v6_10577_0_1, dd_Smed_v6_10577_0_1, [RH, Score=715, Expect=0.0]} {RNA1509_11563} {RNA1310_10198, RNA1509_11563} {RNA1509_11563, RNA815_3817}
28. MligTC455_38164 13 0.27 Mlig455_027447, Mlig455_027450, Mlig455_050652, Mlig455_050712

Neo: -

Age: Up-Down-Down

 PKD2L1, PKDREJ 0.961 - - - - 0.961 -

Mlig455_027447 {REF} {Length: 3023} {Pfam: Polycystin cation channel [PF08016.14, score=77.8]; Lectin C-type domain [PF00059.23, score=31.1]} {Human: ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=69.3, Expect=3e-11]} {Mouse: ENSMUSG00000037578, Pkd2l1, polycystic kidney disease 2-like 1, [Score=70.5, Expect=8e-12]} {Dmel: FBgn0040333, brv3, brivido-3, [Score=50.1, Expect=9e-06]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=54.3, Expect=5e-07]} {Smed: dd_Smed_v6_9977_0_3, dd_Smed_v6_9977_0_3, [Score=66.2, Expect=4e-11]} {RNA1509_36495} {RNA1310_23140.1} {RNA815_29106}

Mlig455_027450 {REF} {Length: 6767} {Pfam: REJ domain [PF02010.17, score=79.6]} {RNA1509_36495} {RNA1310_14058} {RNA815_29482}

Mlig455_050652 {REF} {Length: 10436} {Pfam: Polycystin cation channel [PF08016.14, score=86.6]; Lectin C-type domain [PF00059.23, score=31.0]; Helix-turn-helix domain [PF13936.8, score=22.0]; Homeodomain-like domain [PF13384.8, score=19.0]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=80.1, Expect=4e-14]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=119, Expect=3e-26]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=78.6, Expect=5e-14]} {Smed: dd_Smed_v6_13975_0_1, dd_Smed_v6_13975_0_1, [Score=170, Expect=3e-42]} {RNA1509_36495} {RNA1310_14058} {RNA815_29482}

Mlig455_050712 {REF} {Length: 3654} {Pfam: REJ domain [PF02010.17, score=74.4]} {RNA1509_58823} {RNA1310_41476} {RNA815_46213}
29. MligTC455_40944 28 0.59 Mlig455_063864

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_063864 {REF} {Length: 279} {NoTransDecoderORF} {RNA1509_41236, RNA1509_51543} {RNA1310_39627, RNA1509_41236} {RNA1509_41236, RNA815_33289}
30. MligTC455_51356 297 6.18 Mlig455_002800, Mlig455_002813

Neo: -

Age: logFC(26M/2M)=-0.335

Regeneration-upregulated BL: 4.447

Regeneration-enriched BL: 4.447

 ARNTL 0.961 - - - 0.961 - -

Mlig455_002800 {REF} {Length: 4003} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=41.7]; PAS domain [PF14598.8, score=32.2]; PAS fold [PF08447.14, score=26.1]} {Human: ENSG00000133794, ARNTL, aryl hydrocarbon receptor nuclear translocator like, [Score=174, Expect=4e-46]} {Mouse: ENSMUSG00000055116, Arntl, aryl hydrocarbon receptor nuclear translocator-like, [Score=175, Expect=2e-46]} {Dmel: FBgn0023094, cyc, cycle, [Score=147, Expect=2e-38]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=117, Expect=8e-28]} {Smed: dd_Smed_v6_9171_0_1, dd_Smed_v6_9171_0_1, [Score=107, Expect=5e-24]} {RNA1509_21517} {RNA1310_20501.1} {RNA815_14602}

Mlig455_002813 {REF} {Length: 3183} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=41.7]; PAS fold [PF08447.14, score=26.6]; PAS domain [PF14598.8, score=26.0]} {Human: ENSG00000133794, ARNTL, aryl hydrocarbon receptor nuclear translocator like, [Score=172, Expect=6e-45]} {Mouse: ENSMUSG00000055116, Arntl, aryl hydrocarbon receptor nuclear translocator-like, [Score=172, Expect=2e-45]} {Dmel: FBgn0023094, cyc, cycle, [Score=146, Expect=6e-38]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=116, Expect=2e-27]} {Smed: dd_Smed_v6_9171_0_1, dd_Smed_v6_9171_0_1, [Score=110, Expect=7e-25]} {RNA1509_21517} {RNA1310_20501.1} {RNA815_14602}
31. MligTC455_28773 151 3.15 Mlig455_014768, Mlig455_025167, Mlig455_046102, Mlig455_056419, Mlig455_063940

Neo: -

Age: -

 0.96 - - - - 0.960 -

Mlig455_014768 {REF} {Length: 115} {NoTransDecoderORF} {RNA1509_31462} {RNA1310_23820} {RNA815_18445}

Mlig455_025167 {REF} {Length: 510} {NoTransDecoderORF} {RNA1509_32564} {RNA1310_77730} {RNA815_37446}

Mlig455_046102 {REF} {Length: 325} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}

Mlig455_056419 {REF} {Length: 287} {NoTransDecoderORF} {RNA1509_46268} {RNA1310_13777} {RNA815_18445}

Mlig455_063940 {REF} {Length: 3198} {RNA1509_31462} {RNA1310_56831} {RNA815_38594}
32. MligTC455_50597 118 2.47 Mlig455_000141

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_000141 {REF} {Length: 1083} {RNA1310_48250} {RNA815_57079}
33. MligTC455_23331 165 3.43 Mlig455_016108, Mlig455_036912

Neo: -

Age: -

 0.959 - - - - 0.959 -

Mlig455_016108 {REF} {Length: 1041} {NoTransDecoderORF} {RNA1509_24217} {RNA1310_48796} {RNA815_25805}

Mlig455_036912 {REF} {Length: 669} {NoTransDecoderORF} {RNA1509_24217} {RNA1310_48796} {RNA815_25805}
34. MligTC455_39779 16 0.33 Mlig455_055061, Mlig455_064058

Neo: -

Age: -

 0.958 - - - - 0.958 -

Mlig455_055061 {REF} {Length: 1004} {Pfam: PWWP domain [PF00855.19, score=30.8]} {RNA1310_99156}

Mlig455_064058 {REF} {Length: 699} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.1]} {RNA1509_25422} {RNA1310_16033} {RNA815_318.1}
35. MligTC455_38476 437 9.11 Mlig455_006464

Neo: -

Age: logFC(26M/2M)=-0.343

 ESPNL 0.957 - - - - 0.957 - Mlig455_006464 {REF} {Length: 3836} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.2]; Ankyrin repeats (many copies) [PF13637.8, score=89.0]; Ankyrin repeats (many copies) [PF13857.8, score=69.1]; Ankyrin repeat [PF13606.8, score=57.6]; Ankyrin repeat [PF00023.32, score=40.2]} {Human: ENSG00000144488, ESPNL, espin like, [RH, Score=131, Expect=4e-31]} {Mouse: ENSMUSG00000049515, Espnl, espin-like, [RH, Score=129, Expect=1e-30]; ENSMUSG00000028943, Espn, espin, [RH, Score=125, Expect=2e-29]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=85.9, Expect=7e-17]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=92.4, Expect=5e-19]} {Smed: dd_Smed_v6_14434_0_1, dd_Smed_v6_14434_0_1, [RH, Score=112, Expect=8e-26]} {RNA1509_15655} {RNA1310_12610} {RNA815_27159.1}
36. MligTC455_36491 421 8.76 Mlig455_023802, Mlig455_030304, Mlig455_034629, Mlig455_050822

Neo: -

Age: -

 0.956 - - - - 0.956 -

Mlig455_023802 {REF} {Length: 944} {NoTransDecoderORF} {RNA1509_46050} {RNA1310_18890.3} {RNA815_24468}

Mlig455_030304 {REF} {Length: 878} {NoTransDecoderORF} {RNA1509_33973} {RNA1310_101860} {RNA815_62864}

Mlig455_034629 {REF} {Length: 1103} {NoTransDecoderORF} {RNA1509_52098} {RNA1310_24226} {RNA815_10062.1}

Mlig455_050822 {REF} {Length: 265} {NoTransDecoderORF} {RNA1509_33973} {RNA1310_317.1} {RNA815_24468}
37. MligTC455_07672 31 0.65 Mlig455_046827

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_046827 {REF} {Length: 804} {NoTransDecoderORF}
38. MligTC455_17631 1238 25.8 Mlig455_068095

Neo: -

Age: -

Region-enriched R2: 1.244/0.02935

Regeneration-depleted BL: -2.369
Regeneration-depleted R6: -1.764

 0.955 - - - - 0.955 - Mlig455_068095 {REF} {Length: 2575} {TRANSSPLICED} {Pfam: DNA-binding nuclear phosphoprotein p8 [PF10195.11, score=28.1]} {Smed: dd_Smed_v6_713_0_1, dd_Smed_v6_713_0_1, [Score=42.7, Expect=6e-07]} {RNA1509_18275, RNA1509_20405, RNA1509_41679, RNA1509_41747, RNA1509_50124} {RNA1310_62289, RNA1509_18275, RNA1509_20405, RNA1509_41679, RNA1509_41747, RNA1509_50124} {RNA1509_18275, RNA1509_20405, RNA1509_41679, RNA1509_41747, RNA1509_50124, RNA815_37650}
39. MligTC455_23254 56 1.16 Mlig455_020486

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_020486 {REF} {Length: 1473} {TRANSSPLICED} {RNA1310_31763} {RNA815_30486}
40. MligTC455_24508 1741 36.26 Mlig455_006045, Mlig455_006046, Mlig455_023285, Mlig455_023286, Mlig455_056744

Neo: -

Age: -

Region-enriched R3: 2.162/0.00074

Regeneration-depleted BL: -4.650
Regeneration-depleted R3: -3.081

 0.953 - - - - 0.953 -

Mlig455_006045 {REF} {Length: 1830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27174, RNA1509_32433, RNA1509_34832, RNA1509_41190} {RNA1310_27054.1, RNA1509_27174, RNA1509_32433, RNA1509_34832, RNA1509_41190} {RNA1509_27174, RNA1509_32433, RNA1509_34832, RNA1509_41190, RNA815_12624.1}

Mlig455_006046 {REF} {Length: 1491} {TRANSSPLICED} {RNA1509_41190} {RNA1310_27054.1} {RNA815_12624.1}

Mlig455_023285 {REF} {Length: 1780} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41190} {RNA1310_27054.1} {RNA815_12624.1}

Mlig455_023286 {REF} {Length: 1781} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41190} {RNA1310_27054.1} {RNA815_12624.1}

Mlig455_056744 {REF} {Length: 1491} {TRANSSPLICED} {RNA1509_19154, RNA1509_41190, RNA1509_54970} {RNA1310_27054.1, RNA1509_19154, RNA1509_54970} {RNA1509_19154, RNA1509_54970, RNA815_13840}
41. MligTC455_37879 44 0.92 Mlig455_043317

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_043317 {REF} {Length: 2821} {RNA1310_10915} {RNA815_31437}
42. MligTC455_45519 148 3.08 Mlig455_011435, Mlig455_061176

Neo: -

Age: -

 0.953 - - - 0.953 - -

Mlig455_011435 {REF} {Length: 2322} {RNA1310_38993} {RNA815_43660}

Mlig455_061176 {REF} {Length: 3147} {RNA1509_51062} {RNA1310_38993} {RNA815_43660}
43. MligTC455_16340 123 2.57 Mlig455_013287, Mlig455_035931

Neo: -

Age: -

 0.952 - - - - 0.952 -

Mlig455_013287 {REF} {Length: 1035} {NoTransDecoderORF}

Mlig455_035931 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1509_26559} {RNA1310_20727.1} {RNA815_9605}
44. MligTC455_21900 66 1.37 Mlig455_005766, Mlig455_005785, Mlig455_005810, Mlig455_005812

Neo: -

Age: logFC(26M/2M)=0.602

 0.952 - - - - 0.952 -

Mlig455_005766 {REF} {Length: 3659} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=132.5]; WSC domain [PF01822.21, score=28.1]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=63.2, Expect=6e-10]} {Smed: dd_Smed_v6_21491_0_1, dd_Smed_v6_21491_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_46373} {RNA1310_11892} {RNA815_9334}

Mlig455_005785 {REF} {Length: 4002} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=97.9]; WSC domain [PF01822.21, score=28.0]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=60.1, Expect=5e-09]} {Smed: dd_Smed_v6_22386_0_1, dd_Smed_v6_22386_0_1, [Score=52.8, Expect=2e-07]} {RNA1509_46373} {RNA1310_11892} {RNA815_9334}

Mlig455_005810 {REF} {Length: 1048} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=68.5]} {Smed: dd_Smed_v6_21491_0_1, dd_Smed_v6_21491_0_1, [Score=63.5, Expect=3e-11]} {RNA1310_64615} {RNA815_38158}

Mlig455_005812 {REF} {Length: 2129} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=72.7]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=61.6, Expect=4e-10]} {Smed: dd_Smed_v6_22386_0_1, dd_Smed_v6_22386_0_1, [Score=52.4, Expect=8e-08]} {RNA1509_47157} {RNA1310_11892} {RNA815_9334}
45. MligTC455_44857 114 2.38 Mlig455_019521

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.499

 B3GAT1 0.952 - - 0.952 - - - Mlig455_019521 {REF} {Length: 2177} {Pfam: Glycosyltransferase family 43 [PF03360.18, score=205.7]} {Human: ENSG00000109956, B3GAT1, beta-1,3-glucuronyltransferase 1, [Score=227, Expect=6e-73]; ENSG00000149541, B3GAT3, beta-1,3-glucuronyltransferase 3, [Score=226, Expect=2e-72]} {Mouse: ENSMUSG00000071649, B3gat3, beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I), [Score=229, Expect=7e-74]; ENSMUSG00000045994, B3gat1, beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P), [Score=226, Expect=1e-72]} {Dmel: FBgn0066114, GlcAT-I, [Score=190, Expect=3e-59]} {Celegans: WBGene00005026, sqv-8, Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase sqv-8, [RH, Score=197, Expect=3e-61]} {Smed: dd_Smed_v6_9931_0_1, dd_Smed_v6_9931_0_1, [Score=244, Expect=1e-80]} {RNA1509_54337} {RNA1310_31341.1} {RNA815_14950}
46. MligTC455_52701 111 2.31 Mlig455_038863

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_038863 {REF} {Length: 2330} {RNA1509_55277, RNA1509_55492} {RNA1310_20064, RNA1509_55277, RNA1509_55492} {RNA1509_55277, RNA1509_55492, RNA815_15327}
47. MligTC455_10246 210 4.37 Mlig455_004245, Mlig455_006260, Mlig455_047626, Mlig455_063989

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.568

 DUT 0.951 - - - - 0.951 -

Mlig455_004245 {REF} {Length: 706} {Pfam: dUTPase [PF00692.21, score=102.8]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=108, Expect=2e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=101, Expect=1e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=93.6, Expect=2e-24]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=101, Expect=1e-25]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=107, Expect=2e-30]} {RNA1509_13675} {RNA1310_861.2} {RNA815_32869.2}

Mlig455_006260 {REF} {Length: 712} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=100.7]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=107, Expect=1e-29]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.0, Expect=2e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=92.4, Expect=5e-24]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=99.0, Expect=1e-24]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=107, Expect=2e-30]} {RNA1509_13675} {RNA1310_861.2} {RNA815_32869.2}

Mlig455_047626 {REF} {Length: 711} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=100.8]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=108, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.4, Expect=1e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=93.6, Expect=2e-24]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=100, Expect=4e-25]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=107, Expect=2e-30]} {RNA1509_13675} {RNA1310_861.2} {RNA815_32869.2}

Mlig455_063989 {REF} {Length: 708} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=100.8]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=108, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.4, Expect=1e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=93.6, Expect=2e-24]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=100, Expect=4e-25]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=107, Expect=2e-30]} {RNA1509_13675} {RNA1310_861.2} {RNA815_32869.2}
48. MligTC455_11326 37 0.78 Mlig455_052259

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_052259 {REF} {Length: 631} {NoTransDecoderORF} {RNA1509_23259} {RNA1310_20623} {RNA815_40388}
49. MligTC455_29474 48 1 Mlig455_037282

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_037282 {REF} {Length: 586} {NoTransDecoderORF} {RNA1509_43957} {RNA1310_26620} {RNA815_37878}
50. MligTC455_31621 181 3.76 Mlig455_027745

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_027745 {REF} {Length: 2899} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=39.8]; C2H2-type zinc finger [PF13894.8, score=25.4]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=21.0]} {Dmel: FBgn0003963, ush, u-shaped, [Score=59.3, Expect=1e-08]} {RNA1509_20943} {RNA1310_6862} {RNA815_17333}
51. MligTC455_08794 15 0.31 Mlig455_055241

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_055241 {REF} {Length: 292} {NoTransDecoderORF} {RNA1509_55672} {RNA1310_142492} {RNA815_57567}
52. MligTC455_30495 7279 151.64 Mlig455_057847

Neo: -

Age: -

Regeneration-upregulated BL: 1.661

Regeneration-enriched BL: 1.661

 0.95 - - - 0.950 - - Mlig455_057847 {REF} {Length: 1211} {RNA1509_23257} {RNA1310_55514} {RNA815_20637}
53. MligTC455_50636 95 1.98 Mlig455_007948, Mlig455_008048, Mlig455_008049

Neo: -

Age: -

 0.95 - - - 0.950 - -

Mlig455_007948 {REF} {Length: 3635} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=22.0]; Ig-like C2-type domain [PF06328.13, score=21.9]; Immunoglobulin domain [PF00047.27, score=20.1]} {RNA1310_56409} {RNA815_31320}

Mlig455_008048 {REF} {Length: 1059} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=22.0]; Ig-like C2-type domain [PF06328.13, score=21.9]; Immunoglobulin domain [PF00047.27, score=20.1]} {RNA1310_56409}

Mlig455_008049 {REF} {Length: 367} {NoTransDecoderORF} {RNA1310_117876}
54. MligTC455_52092 37 0.76 Mlig455_025474

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_025474 {REF} {Length: 901} {Pfam: Pancreatic hormone peptide [PF00159.20, score=19.5]} {RNA1509_56567} {RNA1310_46347} {RNA815_35686}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA