Data search


search
Exact
Search

Results for MligTC455_28694

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28694 130 2.71 Mlig455_022358, Mlig455_056417

Neo: -

Age: -

Mlig455_022358 {REF} {Length: 3723} {Pfam: WSC domain [PF01822.21, score=51.5]; PAN domain [PF00024.28, score=22.7]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=46.2, Expect=9e-06]} {RNA1509_27921} {RNA1310_12910} {RNA815_27916}

Mlig455_056417 {REF} {Length: 1901} {Pfam: Integrase core domain [PF00665.28, score=39.8]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [Score=54.7, Expect=2e-09]} {RNA1509_27921} {RNA1310_246.1} {RNA815_27916}

Cumulative graph for MligTC455_28694

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.299 1.996 0.38995 1.00000
RegionR2 1.622 1.996 0.20144 0.56231
RegionR3 0.04 1.996 0.81631 1.00000
RegionR4 1.713 1.996 0.11117 0.32999
RegionR5 -0.535 1.996 0.96394 1.00000
RegionR6 -2.389 1.996 1.00000 1.00000
RegionR7 -0.967 1.996 0.98235 1.00000
RegionR8 -1.782 1.996 0.65701 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.48 1.996 0.77087 1.00000
RegenerationR2 -0.287 1.996 0.61064 0.91974
RegenerationR3 0.376 1.996 0.69802 0.94697
RegenerationR4 0.168 1.996 0.81240 0.99026
RegenerationR5 1.62 1.996 0.11994 0.51911
RegenerationR6 3.561 1.996 0.01077 0.12821
RegenerationBL 2.205 1.996 0.21383 0.55842
RegenerationTP 2.137 1.996 0.36971 0.80757


Genes with expression patterns similar to MligTC455_28694

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28694 130 2.71 Mlig455_022358, Mlig455_056417

Neo: -

Age: -

4 - - 1.000 1.000 1.000 1.000

Mlig455_022358 {REF} {Length: 3723} {Pfam: WSC domain [PF01822.21, score=51.5]; PAN domain [PF00024.28, score=22.7]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=46.2, Expect=9e-06]} {RNA1509_27921} {RNA1310_12910} {RNA815_27916}

Mlig455_056417 {REF} {Length: 1901} {Pfam: Integrase core domain [PF00665.28, score=39.8]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [Score=54.7, Expect=2e-09]} {RNA1509_27921} {RNA1310_246.1} {RNA815_27916}
2. MligTC455_42798 138 2.86 Mlig455_005345, Mlig455_005460

Neo: -

Age: logFC(26M/2M)=0.617

CLEC3A 1.903 - - 0.976 0.927 - -

Mlig455_005345 {REF} {Length: 1469} {Pfam: Lectin C-type domain [PF00059.23, score=22.7]} {RNA1509_35720} {RNA1310_2191.3} {RNA815_1425.1}

Mlig455_005460 {REF} {Length: 722} {Pfam: Lectin C-type domain [PF00059.23, score=25.6]} {Human: ENSG00000166509, CLEC3A, C-type lectin domain family 3 member A, [Score=47.8, Expect=3e-06]} {RNA1509_35720} {RNA1310_2191.3} {RNA815_1425.1}
3. MligTC455_44809 88 1.83 Mlig455_035938

Neo: -

Age: -

1.863 - - - 0.950 0.913 - Mlig455_035938 {REF} {Length: 1369} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=55.8, Expect=3e-09]} {RNA1310_28961.1} {RNA815_27532}
4. MligTC455_29929 164 3.41 Mlig455_030237, Mlig455_068015

Neo: -

Age: -

Region-enriched R2: 4.901/0.00350

SIX6 1.84 - - 0.953 0.887 - -

Mlig455_030237 {REF} {Length: 2545} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=152.1]; Homeodomain [PF00046.31, score=46.4]; Homeobox KN domain [PF05920.13, score=40.1]} {Human: ENSG00000184302, SIX6, SIX homeobox 6, [RH, Score=327, Expect=1e-109]; ENSG00000138083, SIX3, SIX homeobox 3, [RH, Score=325, Expect=8e-108]} {Mouse: ENSMUSG00000038805, Six3, sine oculis-related homeobox 3, [RH, Score=325, Expect=6e-108]; ENSMUSG00000021099, Six6, sine oculis-related homeobox 6, [RH, Score=323, Expect=2e-108]} {Dmel: FBgn0025360, Optix, [RH, Score=291, Expect=9e-93]} {Celegans: WBGene00000453, ceh-32, Homeobox protein ceh-32, [RH, Score=237, Expect=2e-72]} {Smed: dd_Smed_v6_11975_0_1, dd_Smed_v6_11975_0_1, [RH, Score=360, Expect=2e-119]} {RNA1509_39396} {RNA1310_25182.2} {RNA815_23127}

Mlig455_068015 {REF} {Length: 2713} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=152.2]; Homeodomain [PF00046.31, score=46.4]; Homeobox KN domain [PF05920.13, score=40.1]} {Human: ENSG00000184302, SIX6, SIX homeobox 6, [RH, Score=327, Expect=1e-109]; ENSG00000138083, SIX3, SIX homeobox 3, [RH, Score=325, Expect=7e-108]} {Mouse: ENSMUSG00000038805, Six3, sine oculis-related homeobox 3, [RH, Score=325, Expect=5e-108]; ENSMUSG00000021099, Six6, sine oculis-related homeobox 6, [RH, Score=323, Expect=2e-108]} {Dmel: FBgn0025360, Optix, [RH, Score=291, Expect=1e-92]} {Celegans: WBGene00000453, ceh-32, Homeobox protein ceh-32, [RH, Score=237, Expect=1e-72]} {Smed: dd_Smed_v6_11975_0_1, dd_Smed_v6_11975_0_1, [RH, Score=360, Expect=1e-119]} {RNA1509_39396} {RNA1310_25182.2} {RNA815_23127}
5. MligTC455_53054 53 1.11 Mlig455_060861

Neo: -

Age: logFC(26M/2M)=-0.451

Region-enriched R4: 4.246/0.04410

1.798 - - - 0.967 - 0.831 Mlig455_060861 {REF} {Length: 1456} {RNA1509_13505} {RNA1310_40440.2} {RNA815_22046}
6. MligTC455_20879 113 2.36 Mlig455_001891, Mlig455_069718

Neo: -

Age: -

1.766 - - - 0.790 0.976 -

Mlig455_001891 {REF} {Length: 948} {RNA1310_27941} {RNA815_395.1}

Mlig455_069718 {REF} {Length: 699} {RNA1310_29587} {RNA815_395.1}
7. MligTC455_30247 89 1.86 Mlig455_001008

Neo: -

Age: -

1.761 - - - 0.983 - 0.778 Mlig455_001008 {REF} {Length: 5705} {Pfam: D5 N terminal like [PF08706.13, score=48.1]; Primase C terminal 2 (PriCT-2) [PF08707.13, score=46.9]} {RNA1509_20194} {RNA1310_3607.1} {RNA815_25300.1}
8. MligTC455_32445 285 5.93 Mlig455_041727, Mlig455_042282

Neo: -

Age: -

ANK2 1.75 - - 0.953 0.797 - -

Mlig455_041727 {REF} {Length: 4931} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=276.7]; Ankyrin repeats (many copies) [PF13637.8, score=238.3]; Ankyrin repeat [PF00023.32, score=223.0]; Ankyrin repeats (many copies) [PF13857.8, score=214.9]; Ankyrin repeat [PF13606.8, score=201.4]; Ion transport protein [PF00520.33, score=46.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=211, Expect=1e-54]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=290, Expect=2e-80]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=210, Expect=2e-54]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=489, Expect=7e-151]} {Smed: dd_Smed_v6_6201_0_2, dd_Smed_v6_6201_0_2, [RH, Score=745, Expect=0.0]} {RNA1509_18945} {RNA1310_1506.1, RNA1509_18945} {RNA1509_18945, RNA815_450.1}

Mlig455_042282 {REF} {Length: 4940} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=273.8]; Ankyrin repeats (many copies) [PF13637.8, score=232.4]; Ankyrin repeat [PF00023.32, score=218.4]; Ankyrin repeats (many copies) [PF13857.8, score=210.6]; Ankyrin repeat [PF13606.8, score=197.5]; Ion transport protein [PF00520.33, score=46.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=214, Expect=2e-55]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=204, Expect=1e-52]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=201, Expect=2e-51]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=205, Expect=6e-53]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=487, Expect=5e-150]} {Smed: dd_Smed_v6_6201_0_2, dd_Smed_v6_6201_0_2, [RH, Score=736, Expect=0.0]} {RNA1509_18945} {RNA1310_1506.1} {RNA815_8298}
9. MligTC455_44186 185 3.85 Mlig455_052492

Neo: -

Age: -

1.738 - - 0.962 0.776 - - Mlig455_052492 {REF} {Length: 959} {Pfam: Lectin C-type domain [PF00059.23, score=33.2]} {RNA1509_20946} {RNA1310_41618} {RNA815_32434}
10. MligTC455_34214 66 1.37 Mlig455_027682

Neo: -

Age: -

1.735 - - - 0.953 - 0.782 Mlig455_027682 {REF} {Length: 285} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}
11. MligTC455_28819 414 8.62 Mlig455_043756

Neo: -

Age: -

SNIP1 1.733 - - 0.950 0.783 - - Mlig455_043756 {REF} {Length: 5323} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=63.5]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=28.1]} {Human: ENSG00000163877, SNIP1, Smad nuclear interacting protein 1, [RH, Score=230, Expect=3e-72]} {Mouse: ENSMUSG00000050213, Snip1, Smad nuclear interacting protein 1, [RH, Score=229, Expect=2e-72]} {Dmel: FBgn0039943, CG17168, [RH, Score=231, Expect=8e-73]} {Celegans: WBGene00016323, C32E8.5, [RH, Score=219, Expect=9e-70]} {Smed: dd_Smed_v6_13351_0_1, dd_Smed_v6_13351_0_1, [RH, Score=108, Expect=5e-29]} {RNA1509_25457, RNA1509_55657, RNA1509_5701} {RNA1310_26892, RNA1509_25457, RNA1509_55657} {RNA1509_25457, RNA1509_55657, RNA815_453.1}
12. MligTC455_55962 215 4.49 Mlig455_005420

Neo: -

Age: -

1.732 - - - 0.967 - 0.765 Mlig455_005420 {REF} {Length: 1} {TRANSSPLICED} {NoTransDecoderORF}
13. MligTC455_03314 1048 21.84 Mlig455_065746

Neo: -

Age: -

1.731 - - 0.955 0.776 - - Mlig455_065746 {REF} {Length: 1336} {Pfam: Sperm-tail PG-rich repeat [PF07004.14, score=23.9]} {RNA1509_5447} {RNA1310_26690.1} {RNA815_11584}
14. MligTC455_42188 714 14.88 Mlig455_004983

Neo: -

Age: -

1.717 - - 0.973 0.744 - - Mlig455_004983 {REF} {Length: 958} {RNA1509_36666, RNA1509_48333} {RNA1310_81420, RNA1509_36666, RNA1509_48333} {RNA1509_36666, RNA1509_48333, RNA815_25950}
15. MligTC455_11765 292 6.08 Mlig455_032580, Mlig455_032642

Neo: -

Age: -

Region-specific R2: 6.434

Region-enriched R2: 4.662/0.03055

1.71 - - 0.958 0.752 - -

Mlig455_032580 {REF} {Length: 565} {RNA1509_42630} {RNA1310_64208} {RNA815_32993}

Mlig455_032642 {REF} {Length: 663} {RNA1509_42630} {RNA1310_64208} {RNA815_32993}
16. MligTC455_51445 198 4.13 Mlig455_026524

Neo: -

Age: -

1.695 - - - - 0.732 0.963 Mlig455_026524 {REF} {Length: 1888} {RNA1509_20584} {RNA1310_9709.1, RNA1509_20584} {RNA1509_20584, RNA815_5646}
17. MligTC455_42598 125 2.61 Mlig455_046563

Neo: -

Age: Up-Down-Down

EML1 1.69 - - - 0.961 - 0.729 Mlig455_046563 {REF} {Length: 4903} {Pfam: HELP motif [PF03451.16, score=64.1]; WD domain, G-beta repeat [PF00400.34, score=32.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.5]} {Human: ENSG00000066629, EML1, echinoderm microtubule associated protein like 1, [Score=261, Expect=1e-72]; ENSG00000125746, EML2, echinoderm microtubule associated protein like 2, [Score=260, Expect=2e-72]} {Mouse: ENSMUSG00000058070, Eml1, echinoderm microtubule associated protein like 1, [Score=268, Expect=4e-75]; ENSMUSG00000040811, Eml2, echinoderm microtubule associated protein like 2, [Score=267, Expect=1e-74]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=214, Expect=3e-56]} {Celegans: WBGene00001248, elp-1, Echinoderm microtubule-associated protein-like elp-1, [Score=140, Expect=1e-33]} {Smed: dd_Smed_v6_14226_0_1, dd_Smed_v6_14226_0_1, [Score=323, Expect=4e-92]} {RNA1310_20242} {RNA815_18784}
18. MligTC455_40060 205 4.27 Mlig455_009580

Neo: -

Age: -

0.975 - - - - - 0.975 Mlig455_009580 {REF} {Length: 4714} {RNA1509_51795} {RNA1310_40937}
19. MligTC455_31319 363 7.55 Mlig455_032192, Mlig455_039630

Neo: -

Age: Down-Up-Down

0.974 - - - 0.974 - -

Mlig455_032192 {REF} {Length: 2082} {TRANSSPLICED} {RNA1509_14413} {RNA1310_10720.1} {RNA815_3565}

Mlig455_039630 {REF} {Length: 2262} {TRANSSPLICED} {RNA1509_14413} {RNA1310_10720.1} {RNA815_3565}
20. MligTC455_30982 26 0.55 Mlig455_050218

Neo: -

Age: -

MB 0.972 - - - 0.972 - - Mlig455_050218 {REF} {Length: 3902} {Pfam: Globin [PF00042.24, score=56.5]} {Human: ENSG00000198125, MB, myoglobin, [RH, Score=47.0, Expect=5e-07]} {Mouse: ENSMUSG00000018893, Mb, myoglobin, [RH, Score=45.1, Expect=1e-06]} {Celegans: WBGene00008996, glb-14, GLoBin related, [Score=46.2, Expect=2e-06]} {Smed: dd_Smed_v6_15997_0_1, dd_Smed_v6_15997_0_1, [Score=46.2, Expect=1e-06]} {RNA1509_23358} {RNA1310_47695} {RNA815_55072.1}
21. MligTC455_44800 403 8.4 Mlig455_013948, Mlig455_039343

Neo: -

Age: Down-Down-Up

Region-enriched R8: 3.937/0.01062

Regeneration-downregulated BL: -8.303

Regeneration-depleted BL: -8.303

0.966 - - - 0.966 - -

Mlig455_013948 {REF} {Length: 595} {RNA1509_58184} {RNA1310_30957} {RNA815_17521}

Mlig455_039343 {REF} {Length: 595} {RNA1509_58184} {RNA1310_30957, RNA1509_58184} {RNA1509_58184, RNA815_17521}
22. MligTC455_26358 428 8.93 Mlig455_012675

Neo: -

Age: logFC(26M/2M)=-0.338

Region-enriched R2: 1.608/0.04280

NOTCH2 0.965 - - 0.965 - - - Mlig455_012675 {REF} {Length: 4700} {Pfam: EGF-like domain [PF00008.29, score=144.8]; Ankyrin repeats (3 copies) [PF12796.9, score=86.3]; Human growth factor-like EGF [PF12661.9, score=80.1]; Ankyrin repeats (many copies) [PF13857.8, score=70.9]; Ankyrin repeat [PF00023.32, score=65.4]; Ankyrin repeats (many copies) [PF13637.8, score=61.9]; Ankyrin repeat [PF13606.8, score=58.6]; LNR domain [PF00066.19, score=52.0]; EGF-like domain [PF07974.15, score=46.9]; Calcium-binding EGF domain [PF07645.17, score=31.9]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=311, Expect=2e-87]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=329, Expect=2e-93]} {Dmel: FBgn0004647, N, Notch, [Score=325, Expect=6e-92]} {Celegans: WBGene00003001, lin-12, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=214, Expect=1e-56]} {RNA1509_20447, RNA1509_55795} {RNA1310_1718.1, RNA1509_20447, RNA1509_55795} {RNA1509_20447, RNA1509_55795, RNA815_12429}
23. MligTC455_31727 319 6.64 Mlig455_052802

Neo: -

Age: -

Region-enriched R2: 1.942/0.03690

BBS7 0.965 - - - - - 0.965 Mlig455_052802 {REF} {Length: 3681} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=24.7]; FG-GAP-like repeat [PF13517.8, score=19.2]} {Human: ENSG00000138686, BBS7, Bardet-Biedl syndrome 7, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000037325, Bbs7, Bardet-Biedl syndrome 7 (human), [RH, Score=730, Expect=0.0]} {Celegans: WBGene00003892, osm-12, Bardet-Biedl syndrome 7 protein homolog, [RH, Score=395, Expect=1e-127]} {Smed: dd_Smed_v6_15015_0_1, dd_Smed_v6_15015_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_7138} {RNA1310_7894, RNA1509_7138} {RNA1509_7138, RNA815_2924}
24. MligTC455_37184 31 0.64 Mlig455_067992

Neo: -

Age: -

Region-enriched R2: 5.014/0.03873

0.963 - - 0.963 - - - Mlig455_067992 {REF} {Length: 3179} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.8]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=105, Expect=1e-25]} {RNA1509_21018} {RNA1310_39938} {RNA815_28063}
25. MligTC455_47079 31 0.66 Mlig455_004459

Neo: -

Age: Up-Down-Down

SSUH2 0.962 - - - 0.962 - - Mlig455_004459 {REF} {Length: 1975} {Pfam: DnaJ central domain [PF00684.21, score=20.3]} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=189, Expect=3e-56]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=156, Expect=8e-44]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=89.7, Expect=1e-19]} {RNA1509_29510} {RNA1310_15488} {RNA815_5650}
26. MligTC455_22180 88 1.84 Mlig455_006898

Neo: -

Age: -

0.961 - - - - - 0.961 Mlig455_006898 {REF} {Length: 5800} {RNA1509_12420} {RNA1310_87510} {RNA815_50698}
27. MligTC455_27438 28 0.57 Mlig455_040406

Neo: -

Age: -

DCDC1 0.961 - - - 0.961 - - Mlig455_040406 {REF} {Length: 6068} {Pfam: Doublecortin [PF03607.19, score=39.6]} {Human: ENSG00000170959, DCDC1, doublecortin domain containing 1, [Score=356, Expect=2e-99]} {Smed: dd_Smed_v6_11770_0_1, dd_Smed_v6_11770_0_1, [Score=191, Expect=1e-48]} {RNA1509_9003} {RNA1310_581.1} {RNA815_1282}
28. MligTC455_30943 42 0.89 Mlig455_068809, Mlig455_068810

Neo: -

Age: Down-Up-Down

0.961 - - - - - 0.961

Mlig455_068809 {REF} {Length: 1938} {Pfam: Septin [PF00735.20, score=34.8]; AAA domain [PF13476.8, score=32.1]; 50S ribosome-binding GTPase [PF01926.25, score=31.7]; AIG1 family [PF04548.18, score=25.2]; RsgA GTPase [PF03193.18, score=23.7]; AAA domain [PF13245.8, score=19.9]; ABC transporter [PF00005.29, score=19.8]; Type II/IV secretion system protein [PF00437.22, score=19.8]; AAA domain [PF13401.8, score=19.2]} {Dmel: FBgn0011710, Sep1, Septin 1, [Score=47.8, Expect=1e-05]} {Celegans: WBGene00015956, C18B2.5, [Score=66.6, Expect=1e-11]} {RNA1509_28039} {RNA1310_11027} {RNA815_822.2}

Mlig455_068810 {REF} {Length: 4596} {TRANSSPLICED} {Pfam: AIG1 family [PF04548.18, score=36.0]; Septin [PF00735.20, score=34.3]; 50S ribosome-binding GTPase [PF01926.25, score=30.8]; RsgA GTPase [PF03193.18, score=21.8]; AAA domain [PF13476.8, score=19.4]; Type II/IV secretion system protein [PF00437.22, score=18.2]} {Celegans: WBGene00015956, C18B2.5, [RH, Score=91.3, Expect=1e-18]} {RNA1509_28039} {RNA1310_2622} {RNA815_822.1}
29. MligTC455_31626 38 0.79 Mlig455_032857

Neo: -

Age: -

SLC23A1 0.96 - - - 0.960 - - Mlig455_032857 {REF} {Length: 2462} {Pfam: Permease family [PF00860.22, score=281.6]} {Human: ENSG00000170482, SLC23A1, solute carrier family 23 member 1, [Score=400, Expect=4e-132]; ENSG00000089057, SLC23A2, solute carrier family 23 member 2, [Score=380, Expect=1e-123]} {Mouse: ENSMUSG00000029847, Slc23a4, solute carrier family 23 member 4, [Score=421, Expect=4e-140]} {Dmel: FBgn0037807, CG6293, [Score=355, Expect=2e-115]} {Celegans: WBGene00008252, C51E3.6, [RH, Score=250, Expect=1e-75]} {Smed: dd_Smed_v6_9401_0_1, dd_Smed_v6_9401_0_1, [RH, Score=304, Expect=9e-96]} {RNA1509_16219} {RNA1310_39982} {RNA815_42063}
30. MligTC455_41325 202 4.2 Mlig455_025012

Neo: -

Age: Up-Down-Up

CCDC151 0.96 - - 0.960 - - - Mlig455_025012 {REF} {Length: 2382} {TRANSSPLICED} {Human: ENSG00000198003, CCDC151, coiled-coil domain containing 151, [Score=251, Expect=5e-75]} {Mouse: ENSMUSG00000039632, Ccdc151, coiled-coil domain containing 151, [Score=261, Expect=4e-79]} {Dmel: FBgn0036219, CCDC151, Coiled-coil domain containing protein 151, [Score=111, Expect=2e-25]} {Smed: dd_Smed_v6_4526_0_1, dd_Smed_v6_4526_0_1, [Score=463, Expect=3e-158]} {RNA1509_18758} {RNA1310_9513.1} {RNA815_24234}
31. MligTC455_53623 66 1.37 Mlig455_062576

Neo: -

Age: -

0.96 - - 0.960 - - - Mlig455_062576 {REF} {Length: 3190} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=87.2]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=77.7]} {Dmel: FBgn0029723, Proc-R, Proctolin receptor, [RH, Score=76.6, Expect=1e-14]} {Celegans: WBGene00010986, sprr-1, Sex Peptide Receptor (Drosophila) Related, [Score=93.2, Expect=3e-20]} {Smed: dd_Smed_v6_16149_0_1, dd_Smed_v6_16149_0_1, [Score=141, Expect=4e-38]} {RNA1509_25415} {RNA1310_42304} {RNA815_54656}
32. MligTC455_20366 315 6.57 Mlig455_016461, Mlig455_016527, Mlig455_049812

Neo: -

Age: -

0.959 - - - - - 0.959

Mlig455_016461 {REF} {Length: 3503} {RNA1509_38265} {RNA1310_8609} {RNA815_9870}

Mlig455_016527 {REF} {Length: 3465} {RNA1509_38265} {RNA1310_8609} {RNA815_9870}

Mlig455_049812 {REF} {Length: 3193} {RNA1509_38265} {RNA1310_8609} {RNA815_9870}
33. MligTC455_35129 445 9.27 Mlig455_021818

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.554

Regeneration-downregulated R2: -1.936

Regeneration-depleted R2: -1.936

TTLL2 0.959 - - 0.959 - - - Mlig455_021818 {REF} {Length: 3696} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=228.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=21.7]; YheC/D like ATP-grasp [PF14398.8, score=20.9]} {Human: ENSG00000120440, TTLL2, tubulin tyrosine ligase like 2, [RH, Score=330, Expect=7e-103]} {Mouse: ENSMUSG00000079722, Ttll2, tubulin tyrosine ligase-like family, member 2, [RH, Score=323, Expect=4e-101]} {Dmel: FBgn0051108, CG31108, [Score=206, Expect=2e-55]} {Celegans: WBGene00008331, ttll-5, Tubulin Tyrosine Ligase Like, [Score=192, Expect=9e-52]} {Smed: dd_Smed_v6_6390_0_2, dd_Smed_v6_6390_0_2, [Score=218, Expect=2e-59]} {RNA1509_45879, RNA1509_46017, RNA1509_5384} {RNA1310_3598, RNA1509_45879, RNA1509_46017, RNA1509_5384} {RNA1509_45879, RNA1509_46017, RNA1509_5384, RNA815_5905}
34. MligTC455_35773 89 1.86 Mlig455_064449, Mlig455_064456

Neo: -

Age: -

Region-enriched R2: 5.198/0.00725

NANP 0.959 - - - 0.959 - -

Mlig455_064449 {REF} {Length: 503} {NoTransDecoderORF} {RNA1310_53432.2}

Mlig455_064456 {REF} {Length: 3122} {Pfam: Haloacid dehalogenase-like hydrolase [PF13419.8, score=56.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=55.3]; HAD-hyrolase-like [PF13242.8, score=44.6]} {Human: ENSG00000170191, NANP, N-acetylneuraminic acid phosphatase, [RH, Score=47.4, Expect=8e-06]} {Mouse: ENSMUSG00000053916, Nanp, N-acetylneuraminic acid phosphatase, [RH, Score=48.5, Expect=2e-06]} {Celegans: WBGene00018465, F45E1.4, [RH, Score=147, Expect=4e-43]} {Smed: dd_Smed_v6_2813_0_3, dd_Smed_v6_2813_0_3, [Score=174, Expect=2e-50]} {RNA1310_59243} {RNA815_62364}
35. MligTC455_49368 219 4.56 Mlig455_049632

Neo: -

Age: logFC(26M/2M)=-0.345

PCDH11X 0.959 - - 0.959 - - - Mlig455_049632 {REF} {Length: 4529} {Pfam: Cadherin domain [PF00028.19, score=310.0]; Cadherin-like [PF16184.7, score=32.9]; Cadherin-like [PF08266.14, score=23.9]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=295, Expect=6e-83]; ENSG00000184226, PCDH9, protocadherin 9, [Score=293, Expect=2e-82]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=292, Expect=1e-81]; ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=289, Expect=4e-80]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=298, Expect=6e-84]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=295, Expect=3e-82]; ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=289, Expect=3e-81]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=288, Expect=1e-81]} {Dmel: FBgn0284247, ds, dachsous, [Score=279, Expect=4e-77]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=191, Expect=3e-49]} {Smed: dd_Smed_v6_8478_0_1, dd_Smed_v6_8478_0_1, [RH, Score=426, Expect=1e-133]} {RNA1509_15753, RNA1509_45690} {RNA1310_2027.1, RNA1509_15753, RNA1509_45690} {RNA1509_15753, RNA1509_45690, RNA815_4427}
36. MligTC455_52468 516 10.76 Mlig455_064232

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.559

C11orf1 0.959 - - 0.959 - - - Mlig455_064232 {REF} {Length: 1198} {Pfam: Protein of unknown function (DUF1143) [PF06608.13, score=55.2]} {Human: ENSG00000137720, C11orf1, chromosome 11 open reading frame 1, [RH, Score=52.0, Expect=4e-09]} {Mouse: ENSMUSG00000037971, 1110032A03Rik, RIKEN cDNA 1110032A03 gene, [RH, Score=53.1, Expect=3e-09]} {RNA1509_29539} {RNA1310_48982, RNA1509_29539} {RNA1509_29539, RNA815_26980.2}
37. MligTC455_03670 210 4.37 Mlig455_065514

Neo: -

Age: -

TRPM3 0.955 - - 0.955 - - - Mlig455_065514 {REF} {Length: 9718} {Pfam: SLOG in TRPM [PF18139.3, score=153.7]; SLOG in TRPM, prokaryote [PF18171.3, score=58.2]; Ion transport protein [PF00520.33, score=49.9]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=254, Expect=2e-67]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=258, Expect=1e-68]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=257, Expect=2e-68]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=184, Expect=2e-46]} {Smed: dd_Smed_v6_17981_0_2, dd_Smed_v6_17981_0_2, [Score=924, Expect=0.0]} {RNA1509_15907, RNA1509_51848} {RNA1310_532.1, RNA1509_51848} {RNA1509_51848, RNA815_4201}
38. MligTC455_09664 40 0.84 Mlig455_008164, Mlig455_008202, Mlig455_069585

Neo: -

Age: -

0.954 - - - - 0.954 -

Mlig455_008164 {REF} {Length: 176} {NoTransDecoderORF}

Mlig455_008202 {REF} {Length: 1122} {NoTransDecoderORF} {RNA1509_8906} {RNA1310_1712.1} {RNA815_474.1}

Mlig455_069585 {REF} {Length: 1108} {NoTransDecoderORF} {RNA1509_8906} {RNA1310_1712.1} {RNA815_474.1}
39. MligTC455_53009 196 4.09 Mlig455_018669, Mlig455_018873, Mlig455_020421, Mlig455_046084, Mlig455_070730

Neo: -

Age: Up-Down-Down

Region-enriched R4: 3.634/0.04662

0.954 - - - 0.954 - -

Mlig455_018669 {REF} {Length: 1152} {TRANSSPLICED} {Pfam: MftR C-terminal domain [PF17754.3, score=18.7]} {RNA1509_24093} {RNA1310_59695} {RNA815_17884.1}

Mlig455_018873 {REF} {Length: 1154} {TRANSSPLICED} {Pfam: MftR C-terminal domain [PF17754.3, score=18.7]} {RNA1509_24093} {RNA1310_77206} {RNA815_17884.1}

Mlig455_020421 {REF} {Length: 822} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_34847} {RNA1310_77206} {RNA815_17884.1}

Mlig455_046084 {REF} {Length: 768} {TRANSSPLICED} {RNA1509_35561} {RNA1310_52621} {RNA815_21429.1}

Mlig455_070730 {REF} {Length: 605} {NoTransDecoderORF} {RNA1509_52245} {RNA1310_72970.1} {RNA815_21429.2}
40. MligTC455_46429 48 1 Mlig455_042128

Neo: -

Age: -

0.953 - - - 0.953 - - Mlig455_042128 {REF} {Length: 1428} {Pfam: F5/8 type C domain [PF00754.27, score=33.1]} {RNA1310_65361} {RNA815_33677}
41. MligTC455_03669 200 4.17 Mlig455_037827

Neo: -

Age: Up-Down-Up

TRPM3 0.952 - - 0.952 - - - Mlig455_037827 {REF} {Length: 5234} {Pfam: Ion transport protein [PF00520.33, score=51.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=180, Expect=2e-47]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=183, Expect=7e-49]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=174, Expect=8e-46]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=169, Expect=2e-44]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=122, Expect=8e-29]} {Smed: dd_Smed_v6_17981_0_2, dd_Smed_v6_17981_0_2, [Score=342, Expect=4e-105]} {RNA1509_15907} {RNA1310_532.1} {RNA815_4201}
42. MligTC455_37143 389 8.11 Mlig455_051875, Mlig455_051900, Mlig455_053144

Neo: -

Age: -

Region-enriched R5: 3.075/0.00001

GRIK3 0.952 - - - 0.952 - -

Mlig455_051875 {REF} {Length: 4101} {Pfam: Ligand-gated ion channel [PF00060.28, score=150.6]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=106.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=69.1]; Thiamine transporter protein (Thia_YuaJ) [PF09515.12, score=19.4]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=380, Expect=6e-117]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=373, Expect=2e-114]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=381, Expect=1e-117]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=371, Expect=5e-114]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=364, Expect=2e-111]} {Dmel: FBgn0039927, CG11155, [Score=353, Expect=2e-107]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=324, Expect=5e-97]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=416, Expect=2e-130]} {RNA1509_28025} {RNA1310_2952.1} {RNA815_6075}

Mlig455_051900 {REF} {Length: 3909} {Pfam: Ligand-gated ion channel [PF00060.28, score=150.6]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=106.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=69.1]; Thiamine transporter protein (Thia_YuaJ) [PF09515.12, score=19.4]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=380, Expect=6e-117]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=373, Expect=2e-114]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=381, Expect=1e-117]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=371, Expect=5e-114]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=364, Expect=2e-111]} {Dmel: FBgn0039927, CG11155, [Score=353, Expect=2e-107]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=324, Expect=5e-97]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=416, Expect=2e-130]} {RNA1509_28025} {RNA1310_2952.1} {RNA815_9064}

Mlig455_053144 {REF} {Length: 4100} {Pfam: Ligand-gated ion channel [PF00060.28, score=150.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=106.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=69.0]; Thiamine transporter protein (Thia_YuaJ) [PF09515.12, score=19.0]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=380, Expect=6e-117]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=368, Expect=7e-113]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=380, Expect=4e-117]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=366, Expect=3e-112]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=364, Expect=3e-111]} {Dmel: FBgn0038837, CG3822, [Score=355, Expect=1e-108]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=323, Expect=8e-97]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=412, Expect=4e-129]} {RNA1509_28025} {RNA1310_2952.1} {RNA815_6075}
43. MligTC455_02500 53 1.11 Mlig455_021873

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_021873 {REF} {Length: 136} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_13656} {RNA815_1450.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA