Data search
Results for MligTC455_28827
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28827 | 979 | 20.40 | Mlig455_044793 | Neo: - Age: - |
PTPRD | Mlig455_044793 {REF} {Length: 5656} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=74.6]; Fibronectin type III domain [PF00041.23, score=72.1]} {Human: ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=120, Expect=6e-27]; ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=120, Expect=6e-27]; ENSG00000196090, PTPRT, protein tyrosine phosphatase, receptor type T, [Score=118, Expect=3e-26]} {Mouse: ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=120, Expect=4e-27]; ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=117, Expect=4e-26]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=92.4, Expect=1e-18]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=70.1, Expect=7e-12]} {Smed: dd_Smed_v6_13361_0_1, dd_Smed_v6_13361_0_1, [Score=75.5, Expect=1e-13]} {RNA1509_2576} {RNA1310_671.1} {RNA815_239} |
Cumulative graph for MligTC455_28827
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.492 | 4.704 | 0.03566 | 0.46876 | |
| RegionR2 | 0.258 | 4.704 | 0.54569 | 0.91216 | |
| RegionR3 | 0.314 | 4.704 | 0.37576 | 0.90899 | |
| RegionR4 | 0.505 | 4.704 | 0.17384 | 0.43923 | |
| RegionR5 | 0.456 | 4.704 | 0.15634 | 0.41454 | |
| RegionR6 | 0.896 | 4.704 | 0.00790 | 0.14537 | |
| RegionR7 | 0.584 | 4.704 | 0.17176 | 0.76136 | |
| RegionR8 | -0.521 | 4.704 | 0.41429 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.88 | 4.704 | 0.25314 | 0.96710 | |
| RegenerationR2 | 1.159 | 4.704 | 0.00008 | 0.01044 | |
| RegenerationR3 | 0.622 | 4.704 | 0.06107 | 0.41971 | |
| RegenerationR4 | -0.077 | 4.704 | 0.82164 | 0.99474 | |
| RegenerationR5 | 0.344 | 4.704 | 0.26543 | 0.69698 | |
| RegenerationR6 | -0.081 | 4.704 | 0.80476 | 0.97974 | |
| RegenerationBL | -0.356 | 4.704 | 0.42303 | 0.79120 | |
| RegenerationTP | -0.183 | 4.704 | 0.72133 | 1.00000 |
Genes with expression patterns similar to MligTC455_28827
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28827 | 979 | 20.4 | Mlig455_044793 | Neo: - Age: - |
PTPRD | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044793 {REF} {Length: 5656} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=74.6]; Fibronectin type III domain [PF00041.23, score=72.1]} {Human: ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=120, Expect=6e-27]; ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=120, Expect=6e-27]; ENSG00000196090, PTPRT, protein tyrosine phosphatase, receptor type T, [Score=118, Expect=3e-26]} {Mouse: ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=120, Expect=4e-27]; ENSMUSG00000053141, Ptprt, protein tyrosine phosphatase, receptor type, T, [Score=117, Expect=4e-26]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=92.4, Expect=1e-18]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=70.1, Expect=7e-12]} {Smed: dd_Smed_v6_13361_0_1, dd_Smed_v6_13361_0_1, [Score=75.5, Expect=1e-13]} {RNA1509_2576} {RNA1310_671.1} {RNA815_239} |
| 2. | MligTC455_24170 | 2908 | 60.58 | Mlig455_025932 | Neo: - Age: Down-Up-Down |
PDCD6 | 2.579 | - | - | 0.789 | 0.967 | 0.823 | - | Mlig455_025932 {REF} {Length: 1040} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=73.5]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF00036.34, score=67.4]; EF-hand domain pair [PF13833.8, score=55.2]; EF hand [PF13202.8, score=45.6]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=218, Expect=6e-72]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [RH, Score=216, Expect=3e-71]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=225, Expect=3e-75]} {Celegans: WBGene00019770, M04F3.4, [Score=193, Expect=6e-63]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=228, Expect=1e-76]} {RNA1509_12719, RNA1509_19462} {RNA1310_34663.1, RNA1509_12719} {RNA1509_12719, RNA815_17202} |
| 3. | MligTC455_19624 | 1716 | 35.75 | Mlig455_040484, Mlig455_040490, Mlig455_040497 | Neo: - Age: Down-Up-Down Regeneration-downregulated BL: -2.704 Regeneration-depleted BL: -2.704 |
2.552 | - | - | - | 0.845 | 0.757 | 0.950 | Mlig455_040484 {REF} {Length: 2839} {RNA1509_22148} {RNA1310_15057} {RNA815_15030} Mlig455_040490 {REF} {Length: 2905} {RNA1509_22148} {RNA1310_15057} {RNA815_15030} Mlig455_040497 {REF} {Length: 2610} {RNA1509_22148, RNA1509_29906} {RNA1310_15057, RNA1509_22148, RNA1509_29906} {RNA1509_22148, RNA1509_29906, RNA815_15030} |
|
| 4. | MligTC455_42033 | 3403 | 70.89 | Mlig455_036579, Mlig455_057772 | Neo: - |
KLHDC2, KLHDC3 | 2.536 | - | - | - | 0.951 | 0.718 | 0.867 | Mlig455_036579 {REF} {Length: 3037} {Pfam: Galactose oxidase, central domain [PF13418.8, score=91.4]; Galactose oxidase, central domain [PF13415.8, score=74.1]; Kelch motif [PF01344.27, score=64.2]; Kelch motif [PF13964.8, score=60.7]; Kelch motif [PF13854.8, score=57.8]; Kelch motif [PF07646.17, score=45.5]} {Human: ENSG00000124702, KLHDC3, kelch domain containing 3, [Score=75.5, Expect=2e-14]; ENSG00000165516, KLHDC2, kelch domain containing 2, [Score=73.2, Expect=6e-14]} {Mouse: ENSMUSG00000063576, Klhdc3, kelch domain containing 3, [Score=73.6, Expect=6e-14]; ENSMUSG00000020978, Klhdc2, kelch domain containing 2, [Score=72.4, Expect=1e-13]; ENSMUSG00000051890, Klhdc1, kelch domain containing 1, [Score=70.1, Expect=8e-13]} {Dmel: FBgn0034704, CG6758, [Score=62.0, Expect=3e-10]} {Celegans: WBGene00001827, hcf-1, HCF1 related; Host cell factor 1, [Score=68.2, Expect=3e-12]} {Smed: dd_Smed_v6_6196_0_1, dd_Smed_v6_6196_0_1, [Score=72.8, Expect=8e-14]} {RNA1509_52886} {RNA1310_14345.1} {RNA815_5318.1} Mlig455_057772 {REF} {Length: 2092} {Pfam: Galactose oxidase, central domain [PF13418.8, score=106.7]; Galactose oxidase, central domain [PF13415.8, score=85.2]; Kelch motif [PF13854.8, score=66.3]; Kelch motif [PF01344.27, score=64.0]; Kelch motif [PF13964.8, score=63.3]; Kelch motif [PF07646.17, score=44.8]} {Human: ENSG00000165516, KLHDC2, kelch domain containing 2, [Score=79.7, Expect=5e-16]} {Mouse: ENSMUSG00000020978, Klhdc2, kelch domain containing 2, [Score=76.3, Expect=1e-14]; ENSMUSG00000063576, Klhdc3, kelch domain containing 3, [Score=73.2, Expect=9e-14]} {Dmel: FBgn0034704, CG6758, [Score=62.0, Expect=5e-10]} {Celegans: WBGene00001827, hcf-1, HCF1 related; Host cell factor 1, [Score=68.9, Expect=3e-12]} {Smed: dd_Smed_v6_6196_0_1, dd_Smed_v6_6196_0_1, [Score=70.9, Expect=5e-13]} {RNA1509_24585, RNA1509_52886} {RNA1310_14345.1, RNA1509_24585, RNA1509_52886} {RNA1509_24585, RNA1509_52886, RNA815_5318.1} |
| 5. | MligTC455_18603 | 3778 | 78.7 | Mlig455_050242 | Neo: - Age: - |
CCDC39 | 2.518 | - | - | 0.710 | 0.958 | 0.850 | - | Mlig455_050242 {REF} {Length: 3281} {Human: ENSG00000284862, CCDC39, coiled-coil domain containing 39, [RH, Score=698, Expect=0.0]} {Mouse: ENSMUSG00000027676, Ccdc39, coiled-coil domain containing 39, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0037276, CG17387, [RH, Score=157, Expect=4e-39]} {Smed: dd_Smed_v6_5955_0_1, dd_Smed_v6_5955_0_1, [RH, Score=779, Expect=0.0]} {RNA1509_738} {RNA1310_4021} {RNA815_1219} |
| 6. | MligTC455_37572 | 2798 | 58.29 | Mlig455_009432 | Neo: - Age: logFC(26M/2M)=-0.283 |
RIBC2 | 1.849 | - | - | - | 0.960 | 0.889 | - | Mlig455_009432 {REF} {Length: 2170} {Pfam: RIB43A [PF05914.14, score=482.0]} {Human: ENSG00000128408, RIBC2, RIB43A domain with coiled-coils 2, [RH, Score=295, Expect=2e-97]} {Mouse: ENSMUSG00000022431, Ribc2, RIB43A domain with coiled-coils 2, [RH, Score=254, Expect=3e-81]} {Dmel: FBgn0036214, CG7264, [RH, Score=136, Expect=2e-36]} {Smed: dd_Smed_v6_26360_0_1, dd_Smed_v6_26360_0_1, [RH, Score=439, Expect=4e-154]} {RNA1509_2052, RNA1509_25329, RNA1509_44631} {RNA1310_13602.1, RNA1509_2052, RNA1509_25329, RNA1509_44631} {RNA1509_2052, RNA1509_25329, RNA1509_44631, RNA815_3363.1} |
| 7. | MligTC455_46696 | 2989 | 62.27 | Mlig455_028406, Mlig455_028419, Mlig455_028440 | Neo: - Age: - |
CFAP157 | 1.837 | - | - | - | 0.887 | - | 0.950 | Mlig455_028406 {REF} {Length: 2433} {TRANSSPLICED} {Human: ENSG00000160401, CFAP157, cilia and flagella associated protein 157, [RH, Score=182, Expect=3e-50]} {Mouse: ENSMUSG00000038987, Cfap157, cilia and flagella associated protein 157, [RH, Score=174, Expect=2e-47]} {Dmel: FBgn0036962, CG17122, [Score=92.0, Expect=2e-19]} {Smed: dd_Smed_v6_11523_0_1, dd_Smed_v6_11523_0_1, [RH, Score=186, Expect=8e-52]} {RNA1509_1958, RNA1509_49262} {RNA1310_7784, RNA1509_1958, RNA1509_49262} {RNA1509_1958, RNA1509_49262, RNA815_3029} Mlig455_028419 {REF} {Length: 2432} {TRANSSPLICED} {Human: ENSG00000160401, CFAP157, cilia and flagella associated protein 157, [RH, Score=182, Expect=3e-50]} {Mouse: ENSMUSG00000038987, Cfap157, cilia and flagella associated protein 157, [RH, Score=174, Expect=2e-47]} {Dmel: FBgn0036962, CG17122, [Score=92.0, Expect=2e-19]} {Smed: dd_Smed_v6_11523_0_1, dd_Smed_v6_11523_0_1, [RH, Score=186, Expect=8e-52]} {RNA1509_1958} {RNA1310_7784} {RNA815_3029} Mlig455_028440 {REF} {Length: 2427} {TRANSSPLICED} {Human: ENSG00000160401, CFAP157, cilia and flagella associated protein 157, [RH, Score=182, Expect=3e-50]} {Mouse: ENSMUSG00000038987, Cfap157, cilia and flagella associated protein 157, [RH, Score=174, Expect=2e-47]} {Dmel: FBgn0036962, CG17122, [Score=92.0, Expect=2e-19]} {Smed: dd_Smed_v6_11523_0_1, dd_Smed_v6_11523_0_1, [RH, Score=186, Expect=8e-52]} {RNA1509_1958} {RNA1310_7784} {RNA815_3029} |
| 8. | MligTC455_46944 | 2203 | 45.9 | Mlig455_006848, Mlig455_055094, Mlig455_055142 | Neo: - |
1.822 | - | - | - | 0.857 | 0.965 | - | Mlig455_006848 {REF} {Length: 3192} {Mouse: ENSMUSG00000021086, Ccdc175, coiled-coil domain containing 175, [RH, Score=57.4, Expect=5e-08]} {Smed: dd_Smed_v6_9798_0_1, dd_Smed_v6_9798_0_1, [RH, Score=291, Expect=2e-87]} {RNA1509_7270} {RNA1310_7123.1, RNA1509_7270} {RNA1509_7270, RNA815_2698} Mlig455_055094 {REF} {Length: 2987} {Mouse: ENSMUSG00000021086, Ccdc175, coiled-coil domain containing 175, [RH, Score=57.4, Expect=5e-08]} {Smed: dd_Smed_v6_9798_0_1, dd_Smed_v6_9798_0_1, [RH, Score=291, Expect=2e-87]} {RNA1509_32123, RNA1509_58459, RNA1509_7270} {RNA1310_7123.1, RNA1509_32123, RNA1509_58459} {RNA1509_32123, RNA1509_58459, RNA815_2698} Mlig455_055142 {REF} {Length: 2497} {Mouse: ENSMUSG00000021086, Ccdc175, coiled-coil domain containing 175, [RH, Score=57.8, Expect=4e-08]} {Smed: dd_Smed_v6_9798_0_1, dd_Smed_v6_9798_0_1, [RH, Score=287, Expect=9e-86]} {RNA1509_7270} {RNA1310_7123.1} {RNA815_2698} |
|
| 9. | MligTC455_41392 | 1282 | 26.7 | Mlig455_017725 | Neo: - Age: - |
CDC14A | 1.765 | - | - | - | 0.809 | - | 0.956 | Mlig455_017725 {REF} {Length: 4406} {Pfam: Dual specificity protein phosphatase, N-terminal half [PF14671.8, score=196.0]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=47.5]; Protein-tyrosine phosphatase [PF00102.29, score=22.3]; Inositol hexakisphosphate [PF14566.8, score=21.8]} {Human: ENSG00000079335, CDC14A, cell division cycle 14A, [RH, Score=554, Expect=0.0]} {Mouse: ENSMUSG00000033502, Cdc14a, CDC14 cell division cycle 14A, [RH, Score=546, Expect=0.0]} {Dmel: FBgn0031952, cdc14, cell division cycle 14, [RH, Score=451, Expect=4e-147]} {Celegans: WBGene00000383, cdc-14, Cell Division Cycle related, [RH, Score=355, Expect=3e-114]} {Smed: dd_Smed_v6_7798_0_1, dd_Smed_v6_7798_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_1975} {RNA1310_7304, RNA1509_1975} {RNA1509_1975, RNA815_1133} |
| 10. | MligTC455_32792 | 314 | 6.55 | Mlig455_010871 | Neo: - Age: Down-Up-Up Region-enriched R4: 2.924/0.00688 |
1.735 | - | - | - | 0.783 | 0.952 | - | Mlig455_010871 {REF} {Length: 1226} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=23.1]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=73.9, Expect=3e-15]} {RNA1509_54110} {RNA1310_37559} {RNA815_18549} | |
| 11. | MligTC455_32075 | 440 | 9.16 | Mlig455_018541 | Neo: - Age: - |
LIMD1 | 1.688 | - | 0.738 | - | - | 0.950 | - | Mlig455_018541 {REF} {Length: 2943} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=90.3]} {Human: ENSG00000144791, LIMD1, LIM domains containing 1, [RH, Score=245, Expect=1e-73]; ENSG00000142279, WTIP, WT1 interacting protein, [RH, Score=238, Expect=3e-73]} {Mouse: ENSMUSG00000025239, Limd1, LIM domains containing 1, [RH, Score=245, Expect=7e-74]; ENSMUSG00000036459, Wtip, WT1-interacting protein, [RH, Score=234, Expect=2e-72]} {Dmel: FBgn0030530, jub, Ajuba LIM protein, [RH, Score=237, Expect=2e-70]} {Celegans: WBGene00006999, zyx-1, Zyxin, [RH, Score=164, Expect=2e-44]} {Smed: dd_Smed_v6_9489_0_2, dd_Smed_v6_9489_0_2, [RH, Score=209, Expect=3e-63]} {RNA1509_13676} {RNA1310_9185} {RNA815_7030} |
| 12. | MligTC455_42585 | 1184 | 24.66 | Mlig455_042618, Mlig455_042653 | Neo: - Age: Up-Down-Down Region-enriched R4: 1.335/0.04456 |
0.964 | - | - | - | - | 0.964 | - | Mlig455_042618 {REF} {Length: 5242} {TRANSSPLICED} {RNA1509_27176, RNA1509_50344} {RNA1310_20034, RNA1509_27176, RNA1509_50344} {RNA1509_27176, RNA1509_50344, RNA815_23056} Mlig455_042653 {REF} {Length: 5047} {TRANSSPLICED} {RNA1509_27176, RNA1509_32638} {RNA1310_20034, RNA1509_32638} {RNA1509_32638, RNA815_23056} |
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| 13. | MligTC455_51978 | 1413 | 29.43 | Mlig455_021747 | Neo: - Age: logFC(26M/2M)=-0.241 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_021747 {REF} {Length: 1293} {Pfam: Protein of unknown function (DUF4532) [PF15046.8, score=65.4]} {Mouse: ENSMUSG00000079304, Tex52, testis expressed 52, [RH, Score=79.3, Expect=1e-16]} {Smed: dd_Smed_v6_6766_0_1, dd_Smed_v6_6766_0_1, [RH, Score=132, Expect=7e-37]} {RNA1509_33881, RNA1509_9696} {RNA1310_26984, RNA1509_33881, RNA1509_9696} {RNA1509_33881, RNA1509_9696, RNA815_12420} | |
| 14. | MligTC455_24169 | 2159 | 44.97 | Mlig455_025964 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.007/0.01417 |
PDCD6 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_025964 {REF} {Length: 1033} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=73.5]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF00036.34, score=67.4]; EF-hand domain pair [PF13833.8, score=55.2]; EF hand [PF13202.8, score=45.6]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=218, Expect=6e-72]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [RH, Score=216, Expect=3e-71]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=225, Expect=3e-75]} {Celegans: WBGene00019770, M04F3.4, [Score=193, Expect=6e-63]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=228, Expect=1e-76]} {RNA1509_19462, RNA1509_51684, RNA1509_8622} {RNA1310_33615, RNA1509_19462, RNA1509_51684, RNA1509_8622} {RNA1509_19462, RNA1509_51684, RNA1509_8622, RNA815_17202} |