Data search
Results for MligTC455_29073
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29073 | 88 | 1.84 | Mlig455_029132, Mlig455_040198 | Neo: - Age: - |
Mlig455_029132 {REF} {Length: 2937} {NoTransDecoderORF} {RNA1509_45811} {RNA1310_50362} {RNA815_3257.3} Mlig455_040198 {REF} {Length: 1035} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_4307.1} {RNA815_2326} |
Cumulative graph for MligTC455_29073
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.324 | 1.863 | 1.00000 | 1.00000 | |
| RegionR2 | 0.499 | 1.863 | 0.59072 | 0.94401 | |
| RegionR3 | 0.288 | 1.863 | 0.64819 | 1.00000 | |
| RegionR4 | 0.967 | 1.863 | 0.42503 | 0.75272 | |
| RegionR5 | 1.057 | 1.863 | 0.30549 | 0.64224 | |
| RegionR6 | -0.544 | 1.863 | 0.86692 | 1.00000 | |
| RegionR7 | -3.618 | 1.863 | 1.00000 | 1.00000 | |
| RegionR8 | 3.675 | 1.863 | 0.00822 | 0.16882 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.4 | 1.863 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.286 | 1.863 | 0.13437 | 0.56131 | |
| RegenerationR3 | 0.555 | 1.863 | 0.60524 | 0.91022 | |
| RegenerationR4 | 0.452 | 1.863 | 0.68123 | 0.94607 | |
| RegenerationR5 | 0.613 | 1.863 | 0.49406 | 0.85540 | |
| RegenerationR6 | 2.085 | 1.863 | 0.06625 | 0.32317 | |
| RegenerationBL | -0.342 | 1.863 | 0.82124 | 1.00000 | |
| RegenerationTP | 0.829 | 1.863 | 0.55539 | 0.93672 |
Genes with expression patterns similar to MligTC455_29073
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29073 | 88 | 1.84 | Mlig455_029132, Mlig455_040198 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_029132 {REF} {Length: 2937} {NoTransDecoderORF} {RNA1509_45811} {RNA1310_50362} {RNA815_3257.3} Mlig455_040198 {REF} {Length: 1035} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_4307.1} {RNA815_2326} |
|
| 2. | MligTC455_27191 | 87 | 1.81 | Mlig455_069613 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.833 Region-enriched R2: 4.460/0.00883 |
RNF213 | 1.751 | 0.798 | - | - | - | 0.953 | - | Mlig455_069613 {REF} {Length: 9312} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=52.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=48.5]; P-loop containing dynein motor region [PF12775.9, score=35.6]; Sigma-54 interaction domain [PF14532.8, score=23.5]; AAA ATPase domain [PF13191.8, score=22.0]; ATPase domain predominantly from Archaea [PF01637.20, score=21.6]; ABC transporter [PF00005.29, score=20.0]; AAA domain [PF13401.8, score=19.1]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=402, Expect=1e-111]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=380, Expect=6e-105]} {RNA1509_3638, RNA1509_52214} {RNA1310_14.1, RNA1509_52214} {RNA1509_52214, RNA815_16.1} |
| 3. | MligTC455_24037 | 331 | 6.89 | Mlig455_033370 | Neo: - Age: - |
0.978 | - | - | - | - | 0.978 | - | Mlig455_033370 {REF} {Length: 1530} {TRANSSPLICED} {Pfam: PAXIP1-associated-protein-1 C term PTIP binding protein [PF15364.8, score=19.9]} {RNA1509_59545} {RNA1310_63661, RNA1509_59545} {RNA1509_59545, RNA815_38848.2} | |
| 4. | MligTC455_42619 | 223 | 4.65 | Mlig455_023045, Mlig455_029542, Mlig455_042845, Mlig455_070405 | Neo: - Age: - |
0.971 | - | - | - | - | - | 0.971 | Mlig455_023045 {REF} {Length: 2368} {Pfam: Nucleoporin protein Ndc1-Nup [PF09531.12, score=19.1]} {RNA1509_56228} {RNA1310_23761.2} {RNA815_24346} Mlig455_029542 {REF} {Length: 2291} {Pfam: Nucleoporin protein Ndc1-Nup [PF09531.12, score=19.0]} {RNA1509_56228} {RNA1310_23761.2} {RNA815_24346} Mlig455_042845 {REF} {Length: 925} {Pfam: Nucleoporin protein Ndc1-Nup [PF09531.12, score=19.0]} {RNA1509_56228} {RNA1310_23761.2} {RNA815_24346} Mlig455_070405 {REF} {Length: 3268} {Pfam: Nucleoporin protein Ndc1-Nup [PF09531.12, score=19.1]} {RNA1509_56228} {RNA1310_23761.2} {RNA815_24346} |
|
| 5. | MligTC455_21785 | 107 | 2.24 | Mlig455_005064 | Neo: - |
KRIT1 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_005064 {REF} {Length: 4037} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.0]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeat [PF00023.32, score=35.8]; Ankyrin repeat [PF13606.8, score=32.7]; FERM central domain [PF00373.20, score=26.3]} {Human: ENSG00000001631, KRIT1, KRIT1, ankyrin repeat containing, [RH, Score=218, Expect=2e-60]; ENSG00000285953, AC000120.3, novel protein, [RH, Score=209, Expect=2e-57]} {Mouse: ENSMUSG00000000600, Krit1, KRIT1, ankyrin repeat containing, [RH, Score=207, Expect=1e-56]} {Dmel: FBgn0029137, Patsas, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00013955, kri-1, KRIT 1 (Krev interaction trapped/cerebral cavernous malformation 1) homolog; Krev interaction trapped/cerebral cavernous malformation 1 isoform a, [RH, Score=85.9, Expect=5e-17]} {Smed: dd_Smed_v6_10935_0_1, dd_Smed_v6_10935_0_1, [RH, Score=137, Expect=3e-33]} {RNA1509_17918} {RNA1310_6799, RNA1509_17918} {RNA1509_17918, RNA815_1724} |
| 6. | MligTC455_26259 | 76 | 1.59 | Mlig455_026466 | Neo: - Age: - |
SSUH2 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_026466 {REF} {Length: 2558} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=211, Expect=9e-64]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=168, Expect=6e-48]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=67.8, Expect=3e-12]} {RNA1509_35931} {RNA1310_33249} {RNA815_15534} |
| 7. | MligTC455_08961 | 17 | 0.36 | Mlig455_062229 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_062229 {REF} {Length: 871} {NoTransDecoderORF} {RNA1310_57807.1} | |
| 8. | MligTC455_42514 | 28 | 0.59 | Mlig455_027746 | Neo: - Age: Up-Down-Down |
KCNC2 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_027746 {REF} {Length: 2596} {Pfam: Ion transport protein [PF00520.33, score=123.8]; BTB/POZ domain [PF02214.24, score=86.8]; Ion channel [PF07885.18, score=37.1]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=284, Expect=2e-86]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=279, Expect=3e-85]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=270, Expect=2e-81]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=279, Expect=3e-85]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=270, Expect=2e-81]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=280, Expect=7e-87]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [Score=303, Expect=3e-94]} {Smed: dd_Smed_v6_13250_0_1, dd_Smed_v6_13250_0_1, [Score=286, Expect=3e-88]} {RNA1509_33421} {RNA1310_15684} {RNA815_16308} |
| 9. | MligTC455_45814 | 62 | 1.28 | Mlig455_035781 | Neo: - Age: - |
OTX1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_035781 {REF} {Length: 1786} {Pfam: Homeodomain [PF00046.31, score=69.6]} {Human: ENSG00000115507, OTX1, orthodenticle homeobox 1, [Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000005917, Otx1, orthodenticle homeobox 1, [Score=128, Expect=2e-33]; ENSMUSG00000021848, Otx2, orthodenticle homeobox 2, [Score=122, Expect=2e-32]} {Dmel: FBgn0085369, Drgx, Dorsal root ganglia homeobox, [Score=97.4, Expect=9e-22]} {Celegans: WBGene00006652, ttx-1, Homeodomain protein TTX-1, [Score=114, Expect=1e-28]} {Smed: dd_Smed_v6_15516_0_1, dd_Smed_v6_15516_0_1, [RH, Score=98.2, Expect=2e-22]} {RNA1509_34770} {RNA1310_31442} {RNA815_3742.2} |
| 10. | MligTC455_31747 | 4603 | 95.89 | Mlig455_020372 | Neo: - Age: logFC(26M/2M)=-0.254 |
PCCA | 0.957 | - | - | - | - | 0.957 | - | Mlig455_020372 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=273.4]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.3]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.3]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.3]; Biotin-requiring enzyme [PF00364.24, score=57.2]; Biotin-lipoyl like [PF13533.8, score=37.1]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.8]; ATP-grasp domain [PF02222.24, score=29.9]; RimK-like ATP-grasp domain [PF08443.13, score=23.8]; ATP-grasp domain [PF02655.16, score=21.1]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=861, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=457, Expect=2e-151]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=823, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1032, Expect=0.0]} {RNA1509_275} {RNA1310_9293.1, RNA1509_275} {RNA1509_275, RNA815_1830.1} |
| 11. | MligTC455_31748 | 4554 | 94.87 | Mlig455_020432 | Neo: - Age: - |
PCCA | 0.957 | - | - | - | - | 0.957 | - | Mlig455_020432 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=272.9]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.4]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.5]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.1]; Biotin-requiring enzyme [PF00364.24, score=57.8]; Biotin-lipoyl like [PF13533.8, score=37.6]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.2]; ATP-grasp domain [PF02222.24, score=29.6]; RimK-like ATP-grasp domain [PF08443.13, score=23.5]; ATP-grasp domain [PF02655.16, score=20.7]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=846, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=861, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=456, Expect=4e-151]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=830, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1027, Expect=0.0]} {RNA1509_275, RNA1509_3750} {RNA1310_9293.1, RNA1509_3750} {RNA1509_3750, RNA815_1830.1} |
| 12. | MligTC455_19146 | 66 | 1.38 | Mlig455_056018 | Neo: Neoblast Age: - |
TOMM22 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_056018 {REF} {Length: 1394} {TRANSSPLICED} {Pfam: Mitochondrial import receptor subunit Tom22 [PF04281.15, score=45.0]} {Human: ENSG00000100216, TOMM22, translocase of outer mitochondrial membrane 22, [RH, Score=50.4, Expect=4e-08]} {Mouse: ENSMUSG00000022427, Tomm22, translocase of outer mitochondrial membrane 22, [RH, Score=47.8, Expect=3e-07]} {Dmel: FBgn0035473, mge, maggie, [Score=70.1, Expect=5e-16]} {Celegans: WBGene00021133, tomm-22, Mitochondrial import receptor subunit TOM22 homolog, [RH, Score=76.6, Expect=7e-19]} {RNA1509_7031} {RNA1310_43451} {RNA815_36165} |
| 13. | MligTC455_10035 | 177 | 3.7 | Mlig455_070770 | Neo: Irradiation |
0.953 | - | - | - | - | 0.953 | - | Mlig455_070770 {REF} {Length: 1452} {NoTransDecoderORF} {RNA1509_18811} {RNA1310_39704} {RNA815_51915} | |
| 14. | MligTC455_06639 | 28 | 0.59 | Mlig455_027528, Mlig455_070528 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_027528 {REF} {Length: 1236} {NoTransDecoderORF} {RNA1509_27597} {RNA1310_113309} {RNA815_43545} Mlig455_070528 {REF} {Length: 780} {NoTransDecoderORF} {RNA1509_23206} {RNA1310_113309} {RNA815_43545} |
|
| 15. | MligTC455_08226 | 28 | 0.59 | Mlig455_063400 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_063400 {REF} {Length: 1266} {NoTransDecoderORF} {RNA1310_75890.1} {RNA815_38364} | |
| 16. | MligTC455_12553 | 207 | 4.31 | Mlig455_039172 | Neo: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_039172 {REF} {Length: 1710} {Pfam: WSC domain [PF01822.21, score=101.1]; F5/8 type C domain [PF00754.27, score=57.4]; Clip-domain serine protease homolog Scarface [PF18399.3, score=25.3]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_2342_0_1, dd_Smed_v6_2342_0_1, [Score=58.2, Expect=3e-09]} {RNA1509_17809} {RNA1310_28139} {RNA815_13563} | |
| 17. | MligTC455_25058 | 7 | 0.15 | Mlig455_029944 | Neo: - Age: Up-Down-Down |
HERC2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_029944 {REF} {Length: 9352} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=324.8]; HECT-domain (ubiquitin-transferase) [PF00632.27, score=182.7]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=136.1]} {Human: ENSG00000128731, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1546, Expect=0.0]; ENSG00000276802, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1545, Expect=0.0]} {Mouse: ENSMUSG00000030451, Herc2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1470, Expect=0.0]} {Dmel: FBgn0031107, HERC2, HECT and RLD domain containing protein 2, [RH, Score=1266, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [Score=116, Expect=8e-27]} {Smed: dd_Smed_v6_3885_0_1, dd_Smed_v6_3885_0_1, [RH, Score=1101, Expect=0.0]} {RNA1509_2217, RNA1509_56877} {RNA1310_95.1, RNA1509_56877} {RNA1509_56877, RNA815_620} |
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