TomoSeq data search

Data search

Results for MligTC455_14596

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_14596	9	0.19	Mlig455_063884	Neo: - Age: -		Mlig455_063884 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_138760}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_14596

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_14596

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14596	9	0.19	Mlig455_063884	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_063884 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_138760}
2.	MligTC455_21429	18	0.37	Mlig455_049174	Neo: - Age: -		0.991	-	-	-	-	0.991	-	Mlig455_049174 {REF} {Length: 2613} {NoTransDecoderORF} {RNA1310_50381} {RNA815_39191}
3.	MligTC455_57696	4	0.08	Mlig455_019716	Neo: - Age: -		0.991	-	-	-	-	0.991	-	Mlig455_019716 {REF} {Length: 85} {NoTransDecoderORF}
4.	MligTC455_49644	38	0.79	Mlig455_027199	Neo: Int S/G2/M Age: -		0.987	-	-	-	-	0.987	-	Mlig455_027199 {REF} {Length: 2902} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.2]} {RNA1509_25402} {RNA1310_45818.1} {RNA815_14744.1}
5.	MligTC455_26220	49	1.03	Mlig455_032627	Neo: Irradiation Age: -		0.984	-	-	-	-	0.984	-	Mlig455_032627 {REF} {Length: 4049} {TRANSSPLICED} {RNA1509_38431} {RNA1310_17439} {RNA815_9396}
6.	MligTC455_03444	4	0.08	Mlig455_042385	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_042385 {REF} {Length: 2176} {RNA1509_35100} {RNA1310_18231} {RNA815_38824}
7.	MligTC455_57427	3	0.05	Mlig455_044620	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_044620 {REF} {Length: 323} {NoTransDecoderORF}
8.	MligTC455_22687	13	0.28	Mlig455_000568	Neo: - Age: -	GRIK3	0.974	-	-	-	-	0.974	-	Mlig455_000568 {REF} {Length: 3271} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=50.7]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=127, Expect=1e-29]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=123, Expect=3e-28]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=121, Expect=1e-27]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=120, Expect=2e-27]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=120, Expect=1e-27]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=119, Expect=3e-27]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=115, Expect=1e-25]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=122, Expect=2e-28]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=105, Expect=5e-23]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [Score=120, Expect=8e-28]} {RNA1310_20394.2} {RNA815_45848}
9.	MligTC455_08375	13	0.27	Mlig455_029564	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_029564 {REF} {Length: 647} {NoTransDecoderORF}
10.	MligTC455_18722	24	0.5	Mlig455_018294	Neo: Int S/G2/M Age: Up-Down-Down	PLK2	0.971	-	-	-	-	0.971	-	Mlig455_018294 {REF} {Length: 3188} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=53.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=23.3]} {Human: ENSG00000145632, PLK2, polo like kinase 2, [Score=75.1, Expect=3e-15]; ENSG00000166851, PLK1, polo like kinase 1, [Score=73.2, Expect=1e-14]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [Score=77.0, Expect=4e-16]; ENSMUSG00000021701, Plk2, polo like kinase 2, [Score=74.7, Expect=3e-15]} {Dmel: FBgn0003124, polo, [Score=65.1, Expect=3e-12]} {Celegans: WBGene00004042, plk-1, Serine/threonine-protein kinase plk-1, [Score=62.8, Expect=2e-11]} {Smed: dd_Smed_v6_3838_0_1, dd_Smed_v6_3838_0_1, [Score=60.5, Expect=6e-11]} {RNA1509_35335} {RNA1310_29286} {RNA815_15815}
11.	MligTC455_24099	11	0.23	Mlig455_007650	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_007650 {REF} {Length: 1423} {RNA1310_111576} {RNA815_14158.1}
12.	MligTC455_08916	9	0.2	Mlig455_009151	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_009151 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_49412} {RNA815_40095}
13.	MligTC455_44790	7	0.15	Mlig455_018751	Neo: - Age: -	CALML3	0.97	-	-	-	-	0.970	-	Mlig455_018751 {REF} {Length: 683} {Pfam: EF-hand domain pair [PF13499.8, score=85.7]; EF hand [PF00036.34, score=83.4]; EF-hand domain [PF13405.8, score=66.3]; EF-hand domain pair [PF13833.8, score=65.1]; EF hand [PF13202.8, score=46.0]; EF-hand domain [PF14658.8, score=27.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.7]; Family of unknown function (DUF5580) [PF17743.3, score=18.9]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=90.5, Expect=2e-23]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=90.1, Expect=2e-23]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=84.0, Expect=3e-21]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=75.5, Expect=5e-18]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=77.4, Expect=1e-18]} {RNA1509_9648} {RNA1310_21302} {RNA815_28645}
14.	MligTC455_09168	3	0.06	Mlig455_066421	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_066421 {REF} {Length: 1402} {tRNA: Val(CAC),pseudo, score=36.2} {RNA1509_51520} {RNA1310_36812} {RNA815_27203}
15.	MligTC455_25719	165	3.44	Mlig455_004747	Neo: - Age: -	CHP1	0.968	-	-	-	-	0.968	-	Mlig455_004747 {REF} {Length: 2272} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.0]; EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=28.8]; EF hand [PF13202.8, score=22.3]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000187446, CHP1, calcineurin like EF-hand protein 1, [Score=122, Expect=2e-34]} {Mouse: ENSMUSG00000014077, Chp1, calcineurin-like EF hand protein 1, [RH, Score=123, Expect=5e-35]} {Dmel: FBgn0037358, elm, ethanol sensitive with low memory, [RH, Score=142, Expect=9e-43]} {Celegans: WBGene00014109, chpf-1, Calcineurin-like EF-Hand Protein Family member, [RH, Score=115, Expect=2e-32]} {Smed: dd_Smed_v6_1504_0_1, dd_Smed_v6_1504_0_1, [RH, Score=118, Expect=9e-34]} {RNA1509_12947} {RNA1310_50406} {RNA815_26406}
16.	MligTC455_33332	15	0.32	Mlig455_050529	Neo: - Age: -	TLR4	0.968	-	-	-	-	0.968	-	Mlig455_050529 {REF} {Length: 5807} {Pfam: Leucine rich repeat [PF13855.8, score=88.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=65.7]; TIR domain [PF01582.22, score=26.4]; Leucine Rich Repeat [PF00560.35, score=23.4]; TIR domain [PF13676.8, score=21.7]} {Human: ENSG00000136869, TLR4, toll like receptor 4, [Score=83.2, Expect=1e-15]} {Mouse: ENSMUSG00000030600, Lrfn1, leucine rich repeat and fibronectin type III domain containing 1, [Score=72.0, Expect=2e-12]} {Dmel: FBgn0026760, Tehao, [Score=79.7, Expect=6e-15]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=53.1, Expect=8e-07]} {RNA1310_135658} {RNA815_11474}
17.	MligTC455_22189	82	1.71	Mlig455_046570	Neo: Irradiation Age: logFC(26M/2M)=-0.350 Region-enriched R5: 3.640/0.00155		0.967	-	-	-	-	0.967	-	Mlig455_046570 {REF} {Length: 3148} {Pfam: CDC45-like protein [PF02724.16, score=33.0]; GRAM domain [PF02893.22, score=32.2]; Nop14-like family [PF04147.14, score=24.4]; Presenilin [PF01080.19, score=22.1]} {Dmel: FBgn0085423, CG34394, [Score=51.2, Expect=1e-06]} {RNA1509_54746} {RNA1310_29343} {RNA815_28931}
18.	MligTC455_12423	7	0.14	Mlig455_067821	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_067821 {REF} {Length: 422} {NoTransDecoderORF} {RNA1509_20962} {RNA1310_1856.3} {RNA815_6906.1}
19.	MligTC455_57505	8	0.16	Mlig455_044679	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_044679 {REF} {Length: 278} {NoTransDecoderORF}
20.	MligTC455_43644	59	1.24	Mlig455_001464	Neo: Int S/G2/M Age: -	PMS2	0.964	-	-	-	-	0.964	-	Mlig455_001464 {REF} {Length: 5111} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=72.1]; MutL C terminal dimerisation domain [PF08676.13, score=63.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=21.4]} {Human: ENSG00000122512, PMS2, PMS1 homolog 2, mismatch repair system component, [RH, Score=312, Expect=1e-92]} {Mouse: ENSMUSG00000079109, Pms2, PMS1 homolog2, mismatch repair system component, [RH, Score=314, Expect=1e-93]} {Dmel: FBgn0011660, Pms2, [RH, Score=269, Expect=4e-77]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [RH, Score=245, Expect=2e-69]} {Smed: dd_Smed_v6_16760_0_2, dd_Smed_v6_16760_0_2, [RH, Score=260, Expect=2e-76]} {RNA1509_20911} {RNA1310_4642, RNA1509_20911} {RNA1509_20911, RNA815_7455}
21.	MligTC455_22408	69	1.43	Mlig455_020360	Neo: Int S/G2/M Age: Down-Up-Down	MAN1B1	0.963	-	-	-	-	0.963	-	Mlig455_020360 {REF} {Length: 3567} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=516.9]} {Human: ENSG00000177239, MAN1B1, mannosidase alpha class 1B member 1, [RH, Score=509, Expect=2e-173]} {Mouse: ENSMUSG00000036646, Man1b1, mannosidase, alpha, class 1B, member 1, [RH, Score=522, Expect=3e-179]} {Dmel: FBgn0039634, alpha-Man-Ib, alpha-Mannosidase class I b, [RH, Score=479, Expect=2e-162]} {Celegans: WBGene00020197, mans-3, alpha-1,2-Mannosidase, [RH, Score=454, Expect=3e-154]} {Smed: dd_Smed_v6_7032_0_1, dd_Smed_v6_7032_0_1, [RH, Score=514, Expect=3e-178]} {RNA1509_10584} {RNA1310_11173, RNA1509_10584} {RNA1509_10584, RNA815_9464}
22.	MligTC455_26289	103	2.15	Mlig455_031915	Neo: - Age: Up-Down-Down Region-enriched R2: 3.261/0.04331		0.962	-	-	-	-	0.962	-	Mlig455_031915 {REF} {Length: 3995} {Pfam: Elongation factor G C-terminus [PF00679.26, score=37.7]} {RNA1509_50100} {RNA1310_17404.1} {RNA815_5685.2}
23.	MligTC455_46590	69	1.44	Mlig455_042477	Neo: - Age: logFC(26M/2M)=-0.499	ANKRD50	0.962	-	-	-	-	0.962	-	Mlig455_042477 {REF} {Length: 4550} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=193.8]; Ankyrin repeats (many copies) [PF13637.8, score=113.6]; Ankyrin repeats (many copies) [PF13857.8, score=103.7]; Ankyrin repeat [PF13606.8, score=101.6]; Ankyrin repeat [PF00023.32, score=85.9]; Mab-21 protein [PF03281.16, score=30.8]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=165, Expect=7e-41]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=164, Expect=1e-40]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=159, Expect=7e-39]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=147, Expect=1e-35]} {Smed: dd_Smed_v6_2072_0_6, dd_Smed_v6_2072_0_6, [Score=145, Expect=5e-35]} {RNA1509_42401} {RNA1310_4658.1, RNA1509_42401} {RNA1509_42401, RNA815_6429.1}
24.	MligTC455_25648	207	4.31	Mlig455_032380	Neo: Int S/G2/M Age: -		0.959	-	-	-	-	0.959	-	Mlig455_032380 {REF} {Length: 2398} {RNA1310_62405.2} {RNA815_37381.1}
25.	MligTC455_52237	15	0.32	Mlig455_013491	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_013491 {REF} {Length: 1488} {NoTransDecoderORF} {RNA1509_50956} {RNA1310_27383} {RNA815_9852.1}
26.	MligTC455_16093	33	0.69	Mlig455_067277	Neo: - Age: Down-Up-Up Region-enriched R4: 4.796/0.01059	CETN2	0.958	-	-	-	-	0.958	-	Mlig455_067277 {REF} {Length: 886} {Pfam: EF-hand domain pair [PF13499.8, score=36.2]; EF hand [PF00036.34, score=36.0]; EF-hand domain [PF13405.8, score=32.4]; EF-hand domain pair [PF13833.8, score=26.0]; EF hand [PF13202.8, score=19.4]} {Human: ENSG00000147400, CETN2, centrin 2, [Score=58.9, Expect=1e-10]; ENSG00000143933, CALM2, calmodulin 2, [Score=56.6, Expect=1e-09]; ENSG00000198668, CALM1, calmodulin 1, [Score=56.6, Expect=2e-10]; ENSG00000160014, CALM3, calmodulin 3, [Score=56.6, Expect=2e-10]} {Mouse: ENSMUSG00000050996, Cetn1, centrin 1, [Score=63.5, Expect=2e-12]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=58.5, Expect=6e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=58.9, Expect=2e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=58.5, Expect=4e-11]} {RNA1310_39411} {RNA815_27208}
27.	MligTC455_05646	6	0.13	Mlig455_013878	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_013878 {REF} {Length: 366} {NoTransDecoderORF} {RNA1509_33205} {RNA1310_69080} {RNA815_19175.1}
28.	MligTC455_01345	8	0.16	Mlig455_002181	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_002181 {REF} {Length: 655} {NoTransDecoderORF} {RNA1509_33446} {RNA1310_9913} {RNA815_13562.1}
29.	MligTC455_06027	6	0.12	Mlig455_057701	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_057701 {REF} {Length: 584} {NoTransDecoderORF}
30.	MligTC455_25314	18	0.39	Mlig455_004144, Mlig455_019456	Neo: - Age: Down-Down-Up Region-enriched R4: 5.385/0.00156	MYRF	0.954	-	-	-	-	0.954	-	Mlig455_004144 {REF} {Length: 3239} {Pfam: NDT80 / PhoG like DNA-binding family [PF05224.14, score=61.0]; Myelin regulatory factor ICA domain [PF13887.8, score=56.4]; Chaperone of endosialidase [PF13884.8, score=26.5]} {Human: ENSG00000124920, MYRF, myelin regulatory factor, [Score=243, Expect=3e-66]} {Mouse: ENSMUSG00000036098, Myrf, myelin regulatory factor, [Score=238, Expect=1e-64]} {Dmel: FBgn0034985, CG3328, [Score=234, Expect=2e-63]} {Celegans: WBGene00004134, myrf-1, Myelin regulatory factor related, [RH, Score=164, Expect=3e-41]} {RNA1509_8962} {RNA1310_4590.2, RNA1509_8962} {RNA1509_8962, RNA815_1404} Mlig455_019456 {REF} {Length: 3217} {Pfam: NDT80 / PhoG like DNA-binding family [PF05224.14, score=61.0]; Myelin regulatory factor ICA domain [PF13887.8, score=56.4]; Chaperone of endosialidase [PF13884.8, score=26.5]} {Human: ENSG00000124920, MYRF, myelin regulatory factor, [Score=243, Expect=3e-66]} {Mouse: ENSMUSG00000036098, Myrf, myelin regulatory factor, [Score=238, Expect=1e-64]} {Dmel: FBgn0034985, CG3328, [Score=234, Expect=2e-63]} {Celegans: WBGene00004134, myrf-1, Myelin regulatory factor related, [RH, Score=164, Expect=2e-41]} {RNA1509_8962} {RNA1310_4590.2} {RNA815_1404}
31.	MligTC455_00615	4	0.09	Mlig455_044144	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_044144 {REF} {Length: 198} {TRANSSPLICED} {NoTransDecoderORF}
32.	MligTC455_03341	78	1.62	Mlig455_065359	Neo: - Age: Up-Down-Up		0.952	-	-	-	-	0.952	-	Mlig455_065359 {REF} {Length: 2340} {TRANSSPLICED} {RNA1509_28552} {RNA1310_15555} {RNA815_4371}
33.	MligTC455_40518	188	3.92	Mlig455_030879	Neo: - Age: Down-Up-Down		0.952	-	-	-	-	0.952	-	Mlig455_030879 {REF} {Length: 3875} {Pfam: L-fucokinase [PF07959.14, score=21.2]} {RNA1509_24525} {RNA1310_7771, RNA1509_24525} {RNA1509_24525, RNA815_2955}
34.	MligTC455_18491	8	0.17	Mlig455_064111	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_064111 {REF} {Length: 2875} {NoTransDecoderORF} {RNA1509_54153} {RNA1310_60879} {RNA815_57959}
35.	MligTC455_25537	267	5.55	Mlig455_004658	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_004658 {REF} {Length: 3956} {TRANSSPLICED} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=54.0]; Gamma tubulin complex component N-terminal [PF17681.3, score=19.7]} {Mouse: ENSMUSG00000033790, Tubgcp5, tubulin, gamma complex associated protein 5, [Score=57.4, Expect=8e-08]} {RNA1509_14096, RNA1509_41301} {RNA1310_22726, RNA1509_41301} {RNA1509_41301, RNA815_17783}
36.	MligTC455_51513	348	7.25	Mlig455_038556, Mlig455_053451	Neo: - Age: - Region-enriched R5: 2.235/0.02381		0.951	-	-	-	-	0.951	-	Mlig455_038556 {REF} {Length: 2714} {TRANSSPLICED} {RNA1509_37154} {RNA1310_37300, RNA1509_37154} {RNA1509_37154, RNA815_23625} Mlig455_053451 {REF} {Length: 3007} {TRANSSPLICED} {RNA1509_37154} {RNA1310_37300} {RNA815_23625}