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Results for MligTC455_34941

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34941 1300 27.08 Mlig455_050149

Neo: -

Age: logFC(26M/2M)=0.240

 MIA2 Mlig455_050149 {REF} {Length: 7267} {TRANSSPLICED} {Human: ENSG00000150527, MIA2, MIA SH3 domain ER export factor 2, [RH, Score=67.0, Expect=3e-10]; ENSG00000285123, CTAGE6, CTAGE family member 6, [RH, Score=65.9, Expect=6e-10]; ENSG00000271321, CTAGE6, CTAGE family member 6, [RH, Score=65.9, Expect=6e-10]; ENSG00000285172, CTAGE15, CTAGE family member 15, [RH, Score=65.5, Expect=7e-10]; ENSG00000271079, CTAGE15, CTAGE family member 15, [RH, Score=65.5, Expect=7e-10]; ENSG00000236761, CTAGE9, CTAGE family member 9, [RH, Score=65.1, Expect=9e-10]} {Mouse: ENSMUSG00000056050, Mia3, melanoma inhibitory activity 3, [RH, Score=64.3, Expect=7e-10]; ENSMUSG00000021000, Mia2, melanoma inhibitory activity 2, [RH, Score=62.8, Expect=4e-09]} {Dmel: FBgn0031842, Tango1, Transport and Golgi organization 1, [RH, Score=82.4, Expect=3e-15]} {RNA1509_2081, RNA1509_43176} {RNA1310_854.2, RNA1509_43176} {RNA1509_43176, RNA815_1012.1}

Cumulative graph for MligTC455_34941

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.265 4.968 0.71982 1.00000
RegionR2 0.03 4.968 0.93208 1.00000
RegionR3 -0.247 4.968 0.39083 0.92097
RegionR4 0.272 4.968 0.40169 0.72818
RegionR5 0.205 4.968 0.40963 0.76852
RegionR6 0.242 4.968 0.38865 0.96420
RegionR7 -0.403 4.968 0.31035 0.94458
RegionR8 -0.364 4.968 0.46678 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.192 4.968 0.11685 0.84373
RegenerationR2 0.067 4.968 0.82311 0.99583
RegenerationR3 0.255 4.968 0.44653 0.83056
RegenerationR4 -0.044 4.968 0.89168 1.00000
RegenerationR5 0.11 4.968 0.70910 0.95529
RegenerationR6 0.206 4.968 0.51566 0.81710
RegenerationBL 1.25 4.968 0.00040 0.01202
RegenerationTP 0.273 4.968 0.54511 0.92996


Genes with expression patterns similar to MligTC455_34941

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34941 1300 27.08 Mlig455_050149

Neo: -

Age: logFC(26M/2M)=0.240

 MIA2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_050149 {REF} {Length: 7267} {TRANSSPLICED} {Human: ENSG00000150527, MIA2, MIA SH3 domain ER export factor 2, [RH, Score=67.0, Expect=3e-10]; ENSG00000285123, CTAGE6, CTAGE family member 6, [RH, Score=65.9, Expect=6e-10]; ENSG00000271321, CTAGE6, CTAGE family member 6, [RH, Score=65.9, Expect=6e-10]; ENSG00000285172, CTAGE15, CTAGE family member 15, [RH, Score=65.5, Expect=7e-10]; ENSG00000271079, CTAGE15, CTAGE family member 15, [RH, Score=65.5, Expect=7e-10]; ENSG00000236761, CTAGE9, CTAGE family member 9, [RH, Score=65.1, Expect=9e-10]} {Mouse: ENSMUSG00000056050, Mia3, melanoma inhibitory activity 3, [RH, Score=64.3, Expect=7e-10]; ENSMUSG00000021000, Mia2, melanoma inhibitory activity 2, [RH, Score=62.8, Expect=4e-09]} {Dmel: FBgn0031842, Tango1, Transport and Golgi organization 1, [RH, Score=82.4, Expect=3e-15]} {RNA1509_2081, RNA1509_43176} {RNA1310_854.2, RNA1509_43176} {RNA1509_43176, RNA815_1012.1}
2. MligTC455_46300 592 12.33 Mlig455_029207

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.553/0.00026

 1.827 0.868 - - - - 0.959 Mlig455_029207 {REF} {Length: 1314} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30245, RNA1509_35999, RNA1509_52366} {RNA1310_3145, RNA1509_30245, RNA1509_35999, RNA1509_52366} {RNA1509_30245, RNA1509_35999, RNA1509_52366, RNA815_27045}
3. MligTC455_39837 838 17.46 Mlig455_060185

Neo: -

Age: -

 FPGT-TNNI3K 1.807 - 0.842 - 0.965 - - Mlig455_060185 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: FAM220 family [PF15487.8, score=160.3]; Ankyrin repeats (3 copies) [PF12796.9, score=61.7]; Ankyrin repeat [PF00023.32, score=55.1]; Ankyrin repeat [PF13606.8, score=52.3]; Ankyrin repeats (many copies) [PF13637.8, score=49.7]; Ankyrin repeats (many copies) [PF13857.8, score=43.9]} {Human: ENSG00000259030, FPGT-TNNI3K, FPGT-TNNI3K readthrough, [Score=64.3, Expect=3e-10]; ENSG00000039560, RAI14, retinoic acid induced 14, [Score=63.9, Expect=4e-10]; ENSG00000116783, TNNI3K, TNNI3 interacting kinase, [Score=63.9, Expect=4e-10]; ENSG00000101752, MIB1, mindbomb E3 ubiquitin protein ligase 1, [Score=62.8, Expect=9e-10]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=68.6, Expect=8e-12]} {Dmel: FBgn0263601, mib1, mind bomb 1, [Score=61.2, Expect=1e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=62.8, Expect=4e-10]} {Smed: dd_Smed_v6_5280_0_1, dd_Smed_v6_5280_0_1, [RH, Score=232, Expect=1e-70]} {RNA1509_12503} {RNA1310_20571, RNA1509_12503} {RNA1509_12503, RNA815_27567}
4. MligTC455_53536 6320 131.67 Mlig455_046722, Mlig455_046837, Mlig455_046844

Neo: -

Age: logFC(26M/2M)=0.195

Regeneration-upregulated BL: 2.033

Regeneration-enriched BL: 2.033

 HNRNPH1, HNRNPH2 1.688 - 0.730 - - 0.958 -

Mlig455_046722 {REF} {Length: 2332} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=111.4]} {Human: ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=8e-68]; ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=226, Expect=4e-68]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=8e-68]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=4e-67]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=230, Expect=1e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=5e-68]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=3e-67]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=132, Expect=7e-33]} {Celegans: WBGene00006367, sym-2, RNA-binding protein sym-2, [Score=112, Expect=3e-27]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=3e-47]} {RNA1509_3891} {RNA1310_9870.1} {RNA815_3405}

Mlig455_046837 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.3]} {Human: ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=226, Expect=4e-68]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=6e-68]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=6e-68]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=4e-67]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=230, Expect=1e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=4e-68]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=3e-67]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=133, Expect=4e-33]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [RH, Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=3e-47]} {RNA1509_3891} {RNA1310_9870.1, RNA1509_3891} {RNA1509_3891, RNA815_3405}

Mlig455_046844 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.2]} {Human: ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=1e-67]; ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=224, Expect=3e-67]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=1e-67]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=219, Expect=7e-66]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=228, Expect=7e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=2e-67]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=220, Expect=4e-66]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=133, Expect=4e-33]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [RH, Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=2e-47]} {RNA1509_3891} {RNA1310_9870.1} {RNA815_3405}
5. MligTC455_30371 1006 20.96 Mlig455_056792

Neo: Int S/G2/M

Age: -

 PPHLN1 0.953 - - - - 0.953 - Mlig455_056792 {REF} {Length: 4639} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=33.4]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [RH, Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [RH, Score=80.9, Expect=2e-16]} {Celegans: WBGene00013307, Y57G11C.9, [Score=56.2, Expect=3e-08]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [Score=112, Expect=7e-27]} {RNA1509_16220, RNA1509_16318, RNA1509_17626} {RNA1310_18930, RNA1509_16220, RNA1509_17626} {RNA1509_16220, RNA1509_17626, RNA815_5252.1}
6. MligTC455_27746 2246 46.8 Mlig455_026528

Neo: -

Age: -

 USP43 0.952 - - - 0.952 - - Mlig455_026528 {REF} {Length: 4903} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=211.4]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=52.3]} {Human: ENSG00000154914, USP43, ubiquitin specific peptidase 43, [RH, Score=285, Expect=3e-80]} {Mouse: ENSMUSG00000020905, Usp43, ubiquitin specific peptidase 43, [RH, Score=287, Expect=3e-81]; ENSMUSG00000063317, Usp31, ubiquitin specific peptidase 31, [RH, Score=273, Expect=1e-75]} {Dmel: FBgn0050421, Usp15-31, Ubiquitin specific protease 15/31, [RH, Score=248, Expect=2e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=111, Expect=8e-25]} {Smed: dd_Smed_v6_9753_0_1, dd_Smed_v6_9753_0_1, [RH, Score=219, Expect=1e-58]} {RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143} {RNA1310_1291, RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143} {RNA1509_1499, RNA1509_24777, RNA1509_29215, RNA1509_30622, RNA1509_31713, RNA1509_60143, RNA815_779.1}
7. MligTC455_30372 989 20.61 Mlig455_056814

Neo: -

Age: Down-Up-Up

 PPHLN1 0.951 - - - - 0.951 - Mlig455_056814 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=33.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.5]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [RH, Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [RH, Score=80.9, Expect=2e-16]} {Celegans: WBGene00013307, Y57G11C.9, [Score=73.9, Expect=6e-14]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [RH, Score=108, Expect=2e-25]} {RNA1509_34398, RNA1509_38819} {RNA1310_37435, RNA1509_38819} {RNA1509_38819, RNA815_18313}
8. MligTC455_40179 405 8.43 Mlig455_003559

Neo: Int S/G2/M

Age: -

 SRFBP1 0.95 - - - - 0.950 - Mlig455_003559 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: BUD22 [PF09073.12, score=34.6]} {Human: ENSG00000151304, SRFBP1, serum response factor binding protein 1, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_9477_0_1, dd_Smed_v6_9477_0_1, [Score=46.6, Expect=1e-05]} {RNA1509_28746} {RNA1310_17756, RNA1509_28746} {RNA1509_28746, RNA815_1312.1}

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