TomoSeq data search

Data search

Results for MligTC455_36836

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36836

71

1.47

Mlig455_048099

Neo: -

Age: -

Mlig455_048099 {REF} {Length: 1394} {TRANSSPLICED} {RNA1509_58153} {RNA1310_20702.1, RNA1509_58153} {RNA1509_58153, RNA815_50889}

Cumulative graph for MligTC455_36836

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.78	1.838	0.49981	1.00000
RegionR2	0.307	1.838	0.76481	1.00000
RegionR3	0.282	1.838	0.75903	1.00000
RegionR4	1.252	1.838	0.27425	0.58080
RegionR5	1.408	1.838	0.12381	0.35368
RegionR6	-0.602	1.838	0.97052	1.00000
RegionR7	0.855	1.838	0.55934	1.00000
RegionR8	0.277	1.838	0.82582	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.44	1.838	0.99996	1.00000
RegenerationR2	0.537	1.838	0.47343	0.85917
RegenerationR3	0.38	1.838	0.66046	0.93337
RegenerationR4	0.035	1.838	0.97542	1.00000
RegenerationR5	0.202	1.838	0.76251	0.97634
RegenerationR6	2.08	1.838	0.02802	0.20921
RegenerationBL	-1.554	1.838	0.39680	0.76571
RegenerationTP	-1.149	1.838	0.52263	0.91550

Genes with expression patterns similar to MligTC455_36836

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36836	71	1.47	Mlig455_048099	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048099 {REF} {Length: 1394} {TRANSSPLICED} {RNA1509_58153} {RNA1310_20702.1, RNA1509_58153} {RNA1509_58153, RNA815_50889}
2.	MligTC455_51562	331	6.9	Mlig455_031005	Neo: Irradiation Age: -	RMI1	1.839	-	-	-	-	0.876	0.963	Mlig455_031005 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: RecQ mediated genome instability protein [PF08585.14, score=132.5]; Recq-mediated genome instability protein 1, C-terminal OB-fold [PF16099.7, score=41.0]} {Human: ENSG00000178966, RMI1, RecQ mediated genome instability 1, [RH, Score=120, Expect=1e-28]} {Mouse: ENSMUSG00000035367, Rmi1, RecQ mediated genome instability 1, [RH, Score=115, Expect=4e-26]} {Celegans: WBGene00011576, rmh-2, RMi1 (RMI1) Homolog, [Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_15427_0_1, dd_Smed_v6_15427_0_1, [RH, Score=97.1, Expect=7e-21]} {RNA1509_19306} {RNA1310_8212.2} {RNA815_20681}
3.	MligTC455_34971	458	9.55	Mlig455_025024	Neo: - Age: Up-Down-Up Region-enriched R2: 1.994/0.04087 Region-enriched R5: 1.574/0.00381		1.815	-	-	-	-	0.862	0.953	Mlig455_025024 {REF} {Length: 1861} {TRANSSPLICED} {RNA1509_42153} {RNA1310_15720.1, RNA1509_42153} {RNA1509_42153, RNA815_7713}
4.	MligTC455_13656	118	2.45	Mlig455_027799	Neo: Irradiation Age: Down-Up-Down Region-enriched R6: 2.903/0.03822		1.778	0.825	-	-	-	0.953	-	Mlig455_027799 {REF} {Length: 4703} {RNA1509_57337} {RNA1310_9265} {RNA815_13115}
5.	MligTC455_31128	677	14.09	Mlig455_014434, Mlig455_014442	Neo: - Age: Down-Down-Up	LIG4	1.742	-	-	-	-	0.950	0.792	Mlig455_014434 {REF} {Length: 3798} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.6]; RNA ligase [PF09414.12, score=29.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=252, Expect=3e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=133, Expect=8e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459} Mlig455_014442 {REF} {Length: 3787} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.7]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]; RNA ligase [PF09414.12, score=27.4]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=649, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=641, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=253, Expect=2e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=134, Expect=5e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=570, Expect=0.0]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459}
6.	MligTC455_22172	104	2.17	Mlig455_031624	Neo: Irradiation Age: -	CHTF18	1.676	-	-	0.956	-	0.720	-	Mlig455_031624 {REF} {Length: 3172} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=34.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=23.5]; AAA ATPase domain [PF13191.8, score=20.6]} {Human: ENSG00000127586, CHTF18, chromosome transmission fidelity factor 18, [RH, Score=320, Expect=4e-94]} {Mouse: ENSMUSG00000019214, Chtf18, CTF18, chromosome transmission fidelity factor 18, [RH, Score=306, Expect=1e-89]} {Dmel: FBgn0015376, cutlet, [RH, Score=303, Expect=2e-88]} {Celegans: WBGene00010676, ctf-18, [RH, Score=209, Expect=2e-56]} {Smed: dd_Smed_v6_13246_0_1, dd_Smed_v6_13246_0_1, [RH, Score=283, Expect=9e-83]} {RNA1509_22604} {RNA1310_8860, RNA1509_22604} {RNA1509_22604, RNA815_20367}
7.	MligTC455_31788	171	3.56	Mlig455_052678	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.348		0.975	-	-	-	-	0.975	-	Mlig455_052678 {REF} {Length: 1703} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=24.1]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_13276.1}
8.	MligTC455_50153	477	9.93	Mlig455_061605	Neo: - Age: -	BDH1	0.969	-	-	-	-	-	0.969	Mlig455_061605 {REF} {Length: 1818} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=138.9]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=92.3]; KR domain [PF08659.12, score=19.8]} {Human: ENSG00000161267, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000275544, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000025423, HSD17B6, hydroxysteroid 17-beta dehydrogenase 6, [Score=163, Expect=9e-47]} {Mouse: ENSMUSG00000046598, Bdh1, 3-hydroxybutyrate dehydrogenase, type 1, [Score=173, Expect=2e-50]} {Dmel: FBgn0033679, CG8888, [RH, Score=108, Expect=4e-26]} {Celegans: WBGene00000979, dhs-16, 3 beta-hydroxysteroid dehydrogenase dhs-16, [Score=135, Expect=7e-36]} {Smed: dd_Smed_v6_8012_0_1, dd_Smed_v6_8012_0_1, [RH, Score=147, Expect=5e-41]} {RNA1509_18804, RNA1509_53392} {RNA1310_15769, RNA1509_18804, RNA1509_53392} {RNA1509_18804, RNA1509_53392, RNA815_8900.1}
9.	MligTC455_13022	748	15.59	Mlig455_049274, Mlig455_050620	Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R4: 2.175/0.00009 Region-enriched R5: 2.026/0.00001		0.968	-	-	-	-	0.968	-	Mlig455_049274 {REF} {Length: 1993} {TRANSSPLICED} {RNA1509_11804} {RNA1310_14843} {RNA815_6608} Mlig455_050620 {REF} {Length: 1986} {TRANSSPLICED} {RNA1509_11804} {RNA1310_14843} {RNA815_6608}
10.	MligTC455_50746	169	3.52	Mlig455_002815	Neo: - Age: logFC(26M/2M)=0.391	TYW5	0.966	-	-	-	-	-	0.966	Mlig455_002815 {REF} {Length: 1947} {TRANSSPLICED} {Pfam: Cupin-like domain [PF13621.8, score=116.6]; JmjC domain, hydroxylase [PF02373.24, score=20.1]; Cupin superfamily protein [PF08007.14, score=19.8]} {Human: ENSG00000162971, TYW5, tRNA-yW synthesizing protein 5, [RH, Score=252, Expect=9e-82]} {Mouse: ENSMUSG00000048495, Tyw5, tRNA-yW synthesizing protein 5, [RH, Score=243, Expect=2e-78]} {Dmel: FBgn0035166, CG13902, [Score=69.7, Expect=6e-13]} {Smed: dd_Smed_v6_8202_0_1, dd_Smed_v6_8202_0_1, [RH, Score=243, Expect=7e-79]} {RNA1509_22421, RNA1509_40253} {RNA1310_30547, RNA1509_22421, RNA1509_40253} {RNA1509_22421, RNA1509_40253, RNA815_8750}
11.	MligTC455_19844	270	5.62	Mlig455_068340	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_068340 {REF} {Length: 348} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_28703} {RNA1310_21339} {RNA815_12138.1}
12.	MligTC455_16923	265	5.52	Mlig455_024968	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_024968 {REF} {Length: 3408} {TRANSSPLICED} {RNA1509_32595} {RNA1310_28336} {RNA815_24187}
13.	MligTC455_48228	4552	94.84	Mlig455_014234, Mlig455_014249, Mlig455_044931	Neo: - Age: - Region-enriched R5: 1.097/0.00014 Regeneration-upregulated BL: 1.340 Regeneration-enriched BL: 1.340	TMEM120B	0.954	-	-	-	-	-	0.954	Mlig455_014234 {REF} {Length: 2077} {Pfam: TMPIT-like protein [PF07851.15, score=447.4]; Syntaxin [PF00804.27, score=20.7]} {Human: ENSG00000188735, TMEM120B, transmembrane protein 120B, [RH, Score=357, Expect=1e-121]} {Mouse: ENSMUSG00000054434, Tmem120b, transmembrane protein 120B, [RH, Score=355, Expect=3e-121]} {Dmel: FBgn0040384, CG32795, [RH, Score=360, Expect=1e-122]} {Celegans: WBGene00019716, M01G5.3, [RH, Score=259, Expect=2e-83]} {Smed: dd_Smed_v6_3041_0_1, dd_Smed_v6_3041_0_1, [RH, Score=376, Expect=1e-129]} {RNA1509_24513, RNA1509_3019, RNA1509_34336} {RNA1310_13709, RNA1509_24513, RNA1509_3019, RNA1509_34336} {RNA1509_24513, RNA1509_3019, RNA1509_34336, RNA815_5133} Mlig455_014249 {REF} {Length: 2078} {Pfam: TMPIT-like protein [PF07851.15, score=447.4]; Syntaxin [PF00804.27, score=20.7]} {Human: ENSG00000188735, TMEM120B, transmembrane protein 120B, [RH, Score=356, Expect=2e-121]} {Mouse: ENSMUSG00000054434, Tmem120b, transmembrane protein 120B, [RH, Score=355, Expect=4e-121]} {Dmel: FBgn0040384, CG32795, [RH, Score=361, Expect=7e-123]} {Celegans: WBGene00019716, M01G5.3, [RH, Score=259, Expect=3e-83]} {Smed: dd_Smed_v6_3041_0_1, dd_Smed_v6_3041_0_1, [RH, Score=376, Expect=1e-129]} {RNA1509_16077} {RNA1310_13709, RNA1509_16077} {RNA1509_16077, RNA815_5133} Mlig455_044931 {REF} {Length: 1941} {Pfam: TMPIT-like protein [PF07851.15, score=312.6]; Syntaxin [PF00804.27, score=21.1]} {Human: ENSG00000188735, TMEM120B, transmembrane protein 120B, [Score=273, Expect=1e-89]} {Mouse: ENSMUSG00000054434, Tmem120b, transmembrane protein 120B, [Score=273, Expect=2e-89]} {Dmel: FBgn0040384, CG32795, [Score=282, Expect=9e-93]} {Celegans: WBGene00019716, M01G5.3, [Score=195, Expect=4e-59]} {Smed: dd_Smed_v6_3041_0_1, dd_Smed_v6_3041_0_1, [Score=302, Expect=2e-101]} {RNA1509_3019} {RNA1310_13709} {RNA815_5133}
14.	MligTC455_47302	310	6.45	Mlig455_022908	Neo: - Age: -	ARHGAP24	0.953	-	-	-	-	-	0.953	Mlig455_022908 {REF} {Length: 2620} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=38.9]} {Human: ENSG00000138639, ARHGAP24, Rho GTPase activating protein 24, [Score=75.9, Expect=7e-14]; ENSG00000163219, ARHGAP25, Rho GTPase activating protein 25, [Score=73.6, Expect=4e-13]; ENSG00000128805, ARHGAP22, Rho GTPase activating protein 22, [Score=73.2, Expect=6e-13]} {Mouse: ENSMUSG00000057315, Arhgap24, Rho GTPase activating protein 24, [Score=78.6, Expect=8e-15]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=69.7, Expect=1e-12]} {RNA1509_23863} {RNA1310_16225.1, RNA1509_23863} {RNA1509_23863, RNA815_11840}
15.	MligTC455_38990	188	3.93	Mlig455_050451	Neo: - Age: - Region-enriched R6: 3.665/0.02106		0.952	-	-	-	-	-	0.952	Mlig455_050451 {REF} {Length: 2510} {Pfam: Aminotransferase class-V [PF00266.21, score=52.4]} {Smed: dd_Smed_v6_6547_0_1, dd_Smed_v6_6547_0_1, [RH, Score=204, Expect=7e-62]} {RNA1509_19354} {RNA1310_15282} {RNA815_6721.1}
16.	MligTC455_40504	747	15.55	Mlig455_046809, Mlig455_069965	Neo: - Age: logFC(26M/2M)=-0.362	FAM81A	0.951	-	-	-	-	0.951	-	Mlig455_046809 {REF} {Length: 2773} {TRANSSPLICED} {Human: ENSG00000157470, FAM81A, family with sequence similarity 81 member A, [RH, Score=138, Expect=1e-36]} {Mouse: ENSMUSG00000032224, Fam81a, family with sequence similarity 81, member A, [RH, Score=135, Expect=4e-36]; ENSMUSG00000109228, Fam81b, family with sequence similarity 81, member B, [RH, Score=134, Expect=7e-35]} {Smed: dd_Smed_v6_13185_0_1, dd_Smed_v6_13185_0_1, [RH, Score=251, Expect=2e-80]} {RNA1509_22796, RNA1509_4545} {RNA1310_18883, RNA1509_22796} {RNA1509_22796, RNA815_6683} Mlig455_069965 {REF} {Length: 2693} {TRANSSPLICED} {Pfam: Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) [PF09712.12, score=22.4]; Apoptogenic protein 1 [PF10231.11, score=20.2]} {Human: ENSG00000157470, FAM81A, family with sequence similarity 81 member A, [RH, Score=138, Expect=6e-36]} {Mouse: ENSMUSG00000032224, Fam81a, family with sequence similarity 81, member A, [RH, Score=135, Expect=3e-35]; ENSMUSG00000109228, Fam81b, family with sequence similarity 81, member B, [RH, Score=132, Expect=9e-34]} {Smed: dd_Smed_v6_13185_0_1, dd_Smed_v6_13185_0_1, [RH, Score=246, Expect=3e-77]} {RNA1509_4545} {RNA1310_18883} {RNA815_6683}

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