M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_40148

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40148 859 17.90 Mlig455_017851, Mlig455_047871

Neo: -

Age: -

Region-enriched R4: 2.301/0.00625

Mlig455_017851 {REF} {Length: 2678} {RNA1509_11917, RNA1509_28007, RNA1509_35856} {RNA1310_13722, RNA1509_11917, RNA1509_28007, RNA1509_35856} {RNA1509_11917, RNA1509_28007, RNA1509_35856, RNA815_5229}

Mlig455_047871 {REF} {Length: 1990} {RNA1509_11917} {RNA1310_13722} {RNA815_5229}

Cumulative graph for MligTC455_40148

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.302 4.367 0.80462 1.00000
RegionR2 -0.348 4.367 0.62536 0.96781
RegionR3 1.239 4.367 0.02269 0.25611
RegionR4 2.301 4.367 0.00053 0.00625
RegionR5 0.874 4.367 0.10491 0.31498
RegionR6 0.007 4.367 0.98695 1.00000
RegionR7 -1.186 4.367 0.11368 0.63912
RegionR8 -2.584 4.367 0.00990 0.18686

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.27 4.367 0.86026 1.00000
RegenerationR2 -0.964 4.367 0.16619 0.60353
RegenerationR3 -0.653 4.367 0.34830 0.76964
RegenerationR4 -0.447 4.367 0.54772 0.89169
RegenerationR5 0.2 4.367 0.78007 0.98187
RegenerationR6 0.174 4.367 0.81228 0.98387
RegenerationBL -0.084 4.367 0.92507 1.00000
RegenerationTP 0.212 4.367 0.82158 1.00000


Genes with expression patterns similar to MligTC455_40148

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40148 859 17.9 Mlig455_017851, Mlig455_047871

Neo: -

Age: -

Region-enriched R4: 2.301/0.00625

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_017851 {REF} {Length: 2678} {RNA1509_11917, RNA1509_28007, RNA1509_35856} {RNA1310_13722, RNA1509_11917, RNA1509_28007, RNA1509_35856} {RNA1509_11917, RNA1509_28007, RNA1509_35856, RNA815_5229}

Mlig455_047871 {REF} {Length: 1990} {RNA1509_11917} {RNA1310_13722} {RNA815_5229}
2. MligTC455_24961 372 7.76 Mlig455_010250

Neo: -

Age: Up-Down-Down

Region-enriched R3: 2.273/0.00043

 ABCC1 3.355 0.792 - - 0.955 0.751 0.857 Mlig455_010250 {REF} {Length: 1326} {Pfam: ABC transporter transmembrane region [PF00664.25, score=124.4]; ABC transporter [PF00005.29, score=99.5]; RecF/RecN/SMC N terminal domain [PF02463.21, score=26.9]} {Human: ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=691, Expect=0.0]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=691, Expect=0.0]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=684, Expect=0.0]} {Mouse: ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=688, Expect=0.0]; ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=678, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=724, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [Score=640, Expect=0.0]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=790, Expect=0.0]} {RNA1509_27415} {RNA1310_660} {RNA815_1295}
3. MligTC455_24962 365 7.6 Mlig455_010262

Neo: -

Age: -

Region-enriched R3: 2.305/0.00050

 ABCC1 2.629 0.798 - - 0.951 - 0.880 Mlig455_010262 {REF} {Length: 5982} {Pfam: ABC transporter transmembrane region [PF00664.25, score=251.6]; ABC transporter [PF00005.29, score=174.9]; 50S ribosome-binding GTPase [PF01926.25, score=29.8]; RecF/RecN/SMC N terminal domain [PF02463.21, score=29.8]; AAA ATPase domain [PF13191.8, score=25.4]; RsgA GTPase [PF03193.18, score=22.0]; P-loop containing region of AAA domain [PF13555.8, score=21.5]; Dynamin family [PF00350.25, score=19.7]} {Human: ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1432, Expect=0.0]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1432, Expect=0.0]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [RH, Score=1415, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [RH, Score=1436, Expect=0.0]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [RH, Score=1417, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [RH, Score=1425, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [RH, Score=1211, Expect=0.0]} {Smed: dd_Smed_v6_6609_0_1, dd_Smed_v6_6609_0_1, [RH, Score=1689, Expect=0.0]} {RNA1509_3541} {RNA1310_660, RNA1509_3541} {RNA1509_3541, RNA815_1295}
4. MligTC455_19589 1267 26.39 Mlig455_019782, Mlig455_019805

Neo: -

Age: Down-Down-Up

Region-enriched R3: 2.513/0.00008
Region-enriched R4: 2.414/0.00063
Region-enriched R5: 2.371/0.00008
Region-enriched R6: 1.844/0.03273

 2.619 0.731 - - 0.965 - 0.923

Mlig455_019782 {REF} {Length: 858} {RNA1509_20360} {RNA1310_37068} {RNA815_23648}

Mlig455_019805 {REF} {Length: 869} {RNA1509_20360, RNA1509_54648} {RNA1310_37068, RNA1509_54648} {RNA1509_54648, RNA815_23648}
5. MligTC455_01050 3538 73.71 Mlig455_012178, Mlig455_028829, Mlig455_028849

Neo: -

Age: logFC(26M/2M)=0.346

 2.51 0.817 - - 0.951 - 0.742

Mlig455_012178 {REF} {Length: 448} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_31304} {RNA1310_64210.2}

Mlig455_028829 {REF} {Length: 3866} {RNA1509_44198} {RNA1310_7625.1} {RNA815_9375.1}

Mlig455_028849 {REF} {Length: 3623} {RNA1509_31304, RNA1509_42179, RNA1509_56589} {RNA1310_7625.1, RNA1509_31304, RNA1509_42179, RNA1509_56589} {RNA1509_31304, RNA1509_42179, RNA1509_56589, RNA815_9375.1}
6. MligTC455_48392 2721 56.69 Mlig455_067175

Neo: -

Age: Up-Down-Up

 A1CF 1.866 - - - 0.961 - 0.905 Mlig455_067175 {REF} {Length: 4533} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=114.0]; RNA recognition motif [PF16367.7, score=29.0]; double strand RNA binding domain from DEAD END PROTEIN 1 [PF14709.9, score=26.7]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [Score=414, Expect=1e-133]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [Score=400, Expect=2e-128]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [Score=394, Expect=4e-126]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=333, Expect=1e-102]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=275, Expect=3e-81]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=441, Expect=2e-143]} {RNA1509_1358, RNA1509_37347} {RNA1310_15318, RNA1509_37347} {RNA1509_37347, RNA815_6951}
7. MligTC455_49086 274 5.71 Mlig455_011515

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.627

Region-enriched R3: 2.565/0.00416
Region-enriched R5: 2.441/0.00091
Region-enriched R6: 2.339/0.03988

 RAC1 1.833 - - - 0.951 - 0.882 Mlig455_011515 {REF} {Length: 1740} {Pfam: Ras family [PF00071.24, score=159.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=69.7]; ADP-ribosylation factor family [PF00025.23, score=26.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=221, Expect=2e-73]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=218, Expect=1e-72]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=217, Expect=4e-72]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=221, Expect=1e-73]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=217, Expect=3e-72]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=217, Expect=3e-72]} {Dmel: FBgn0010333, Rac1, [Score=221, Expect=3e-74]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=226, Expect=5e-76]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=223, Expect=6e-75]} {RNA1509_17203} {RNA1310_15755.1} {RNA815_8276}
8. MligTC455_25347 479 9.98 Mlig455_019271

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.925

Region-enriched R3: 2.998/0.00011

 1.818 - - - 0.968 - 0.850 Mlig455_019271 {REF} {Length: 1957} {Pfam: Deoxynucleoside kinase [PF01712.21, score=19.6]} {RNA1509_59253} {RNA1310_16258} {RNA815_552.1}
9. MligTC455_24146 2470 51.46 Mlig455_060904, Mlig455_069370, Mlig455_069388

Neo: -

Age: logFC(26M/2M)=-0.509

Region-enriched R4: 1.799/0.00434
Region-enriched R3: 1.761/0.00220
Region-enriched R5: 1.603/0.00247

 1.811 - - - 0.986 - 0.825

Mlig455_060904 {REF} {Length: 1171} {Pfam: WW domain-binding protein 1 [PF11669.10, score=23.0]} {RNA1509_12053, RNA1509_23482} {RNA1310_48182, RNA1509_23482} {RNA1509_23482, RNA815_22213}

Mlig455_069370 {REF} {Length: 1132} {RNA1509_12053} {RNA1310_48182} {RNA815_22213}

Mlig455_069388 {REF} {Length: 1155} {Pfam: WW domain-binding protein 1 [PF11669.10, score=23.6]} {RNA1509_12053} {RNA1310_48182} {RNA815_22213}
10. MligTC455_12709 342 7.13 Mlig455_000494

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.963

Region-enriched R3: 4.960/0.00124
Region-enriched R5: 4.179/0.00235

Regeneration-upregulated TP: 7.755

Regeneration-enriched TP: 7.755

 1.803 - - - 0.972 - 0.831 Mlig455_000494 {REF} {Length: 1364} {RNA1509_6476} {RNA1310_70627.1} {RNA815_15963}
11. MligTC455_48968 2833 59.01 Mlig455_068344

Neo: -

Age: -

 1.796 - - - 0.968 - 0.828 Mlig455_068344 {REF} {Length: 680} {TRANSSPLICED} {Pfam: Type III secretion system lipoprotein chaperone (YscW) [PF09619.12, score=24.2]} {RNA1509_52356} {RNA1310_19739.1} {RNA815_20380}
12. MligTC455_19520 711 14.82 Mlig455_018524

Neo: -

Age: logFC(26M/2M)=-0.243

 PTDSS2 1.785 - - - 0.958 - 0.827 Mlig455_018524 {REF} {Length: 3134} {TRANSSPLICED} {Pfam: Phosphatidyl serine synthase [PF03034.17, score=388.0]} {Human: ENSG00000174915, PTDSS2, phosphatidylserine synthase 2, [Score=480, Expect=7e-167]} {Mouse: ENSMUSG00000025495, Ptdss2, phosphatidylserine synthase 2, [Score=483, Expect=3e-168]} {Dmel: FBgn0037010, CG4825, [Score=269, Expect=1e-84]} {Celegans: WBGene00012095, pssy-2, PhosphatidylSerine SYnthase, [Score=275, Expect=3e-86]} {Smed: dd_Smed_v6_7678_0_1, dd_Smed_v6_7678_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_10186, RNA1509_15443, RNA1509_19161, RNA1509_25562, RNA1509_26982} {RNA1310_5581, RNA1509_10186, RNA1509_15443, RNA1509_19161, RNA1509_25562, RNA1509_26982} {RNA1509_10186, RNA1509_15443, RNA1509_19161, RNA1509_25562, RNA1509_26982, RNA815_3642.1}
13. MligTC455_34132 637 13.26 Mlig455_001144, Mlig455_001306

Neo: -

Age: logFC(26M/2M)=-0.466

Region-enriched R3: 2.010/0.00006
Region-enriched R5: 1.734/0.00009

 1.76 0.802 - - - - 0.958

Mlig455_001144 {REF} {Length: 2159} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.7]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=23.1]} {RNA1509_32599} {RNA1310_21009} {RNA815_32959}

Mlig455_001306 {REF} {Length: 2354} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.6]} {RNA1310_21009} {RNA815_32959}
14. MligTC455_43369 2802 58.37 Mlig455_067767

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.465

 ACHE 1.76 - - - 0.958 - 0.802 Mlig455_067767 {REF} {Length: 11472} {Pfam: Carboxylesterase family [PF00135.30, score=972.4]; alpha/beta hydrolase fold [PF07859.15, score=53.6]} {Human: ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=222, Expect=1e-60]} {Mouse: ENSMUSG00000023328, Ache, acetylcholinesterase, [Score=215, Expect=1e-58]} {Dmel: FBgn0027584, CG4757, [RH, Score=181, Expect=7e-48]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=189, Expect=5e-50]} {Smed: dd_Smed_v6_10334_0_1, dd_Smed_v6_10334_0_1, [Score=191, Expect=7e-51]} {RNA1509_27104, RNA1509_6008, RNA1509_82} {RNA1310_83.1, RNA1509_27104, RNA1509_6008, RNA1509_82} {RNA1509_27104, RNA1509_6008, RNA1509_82, RNA815_40.1}
15. MligTC455_22295 61 1.27 Mlig455_013847

Neo: -

Age: -

Region-enriched R4: 4.322/0.00351

 1.743 0.784 - - - - 0.959 Mlig455_013847 {REF} {Length: 739} {RNA1509_27316} {RNA1310_79145} {RNA815_31484}
16. MligTC455_18707 1872 38.99 Mlig455_027577

Neo: -

Age: Up-Down-Down

Region-enriched R3: 2.006/0.00181

 QRICH2 1.736 - - - 0.965 - 0.771 Mlig455_027577 {REF} {Length: 5745} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=74.7, Expect=1e-12]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [Score=103, Expect=1e-21]} {RNA1509_3833} {RNA1310_27824} {RNA815_7635}
17. MligTC455_11294 430 8.95 Mlig455_068327

Neo: -

Age: -

 1.727 - - - 0.966 - 0.761 Mlig455_068327 {REF} {Length: 1267} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=21.5]} {RNA1509_10965} {RNA1310_87215.1} {RNA815_44952}
18. MligTC455_11295 996 20.74 Mlig455_007322, Mlig455_068328

Neo: -

Age: Down-Up-Down

 MTHFR 1.724 - - - 0.966 - 0.758

Mlig455_007322 {REF} {Length: 3390} {Pfam: Methylenetetrahydrofolate reductase [PF02219.19, score=342.2]} {Human: ENSG00000177000, MTHFR, methylenetetrahydrofolate reductase, [Score=642, Expect=0.0]} {Mouse: ENSMUSG00000029009, Mthfr, methylenetetrahydrofolate reductase, [Score=643, Expect=0.0]} {Dmel: FBgn0036157, CG7560, [Score=85.5, Expect=1e-17]} {Celegans: WBGene00015512, mthf-1, Probable methylenetetrahydrofolate reductase, [Score=538, Expect=0.0]} {Smed: dd_Smed_v6_8918_0_1, dd_Smed_v6_8918_0_1, [Score=650, Expect=0.0]} {RNA1509_10965, RNA1509_9760} {RNA1310_13357, RNA1509_10965} {RNA1509_10965, RNA815_21219}

Mlig455_068328 {REF} {Length: 5336} {Pfam: Methylenetetrahydrofolate reductase [PF02219.19, score=343.2]} {Human: ENSG00000177000, MTHFR, methylenetetrahydrofolate reductase, [Score=640, Expect=0.0]} {Mouse: ENSMUSG00000029009, Mthfr, methylenetetrahydrofolate reductase, [Score=642, Expect=0.0]} {Dmel: FBgn0036157, CG7560, [Score=85.5, Expect=1e-17]} {Celegans: WBGene00015512, mthf-1, Probable methylenetetrahydrofolate reductase, [Score=537, Expect=0.0]} {Smed: dd_Smed_v6_8918_0_1, dd_Smed_v6_8918_0_1, [Score=653, Expect=0.0]} {RNA1509_27425, RNA1509_9760} {RNA1310_13357, RNA1509_27425, RNA1509_9760} {RNA1509_27425, RNA1509_9760, RNA815_21219}
19. MligTC455_40876 1006 20.96 Mlig455_028183

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.153/0.01519
Region-enriched R3: 1.090/0.00901

 ETHE1 1.716 0.766 - - 0.950 - - Mlig455_028183 {REF} {Length: 1716} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily [PF00753.29, score=45.0]} {Human: ENSG00000105755, ETHE1, ETHE1, persulfide dioxygenase, [RH, Score=323, Expect=6e-112]} {Mouse: ENSMUSG00000064254, Ethe1, ethylmalonic encephalopathy 1, [RH, Score=321, Expect=4e-111]} {Dmel: FBgn0050022, CG30022, [RH, Score=292, Expect=2e-99]} {Celegans: WBGene00007886, ethe-1, ETHE1 (Human ETHylmalonic Encephalopathy) homolog, [RH, Score=286, Expect=1e-97]} {Smed: dd_Smed_v6_944_0_1, dd_Smed_v6_944_0_1, [RH, Score=318, Expect=2e-110]} {RNA1509_7310} {RNA1310_16001.1} {RNA815_19195}
20. MligTC455_19697 1053 21.93 Mlig455_057993

Neo: -

Age: -

 ALDH5A1 1.71 - 0.746 - 0.964 - - Mlig455_057993 {REF} {Length: 2552} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=540.1]} {Human: ENSG00000112294, ALDH5A1, aldehyde dehydrogenase 5 family member A1, [RH, Score=479, Expect=3e-165]} {Mouse: ENSMUSG00000035936, Aldh5a1, aldhehyde dehydrogenase family 5, subfamily A1, [RH, Score=510, Expect=1e-177]} {Dmel: FBgn0039349, Ssadh, Succinic semialdehyde dehydrogenase, [RH, Score=491, Expect=2e-170]} {Celegans: WBGene00000113, alh-7, ALdehyde deHydrogenase, [RH, Score=395, Expect=2e-133]} {Smed: dd_Smed_v6_8292_0_1, dd_Smed_v6_8292_0_1, [RH, Score=441, Expect=5e-151]} {RNA1509_33545, RNA1509_37104, RNA1509_51041, RNA1509_57730} {RNA1310_16721.1, RNA1509_33545, RNA1509_37104, RNA1509_51041} {RNA1509_33545, RNA1509_37104, RNA1509_51041, RNA815_12649.1}
21. MligTC455_53238 596 12.41 Mlig455_035167

Neo: -

Age: Up-Down-Up

Region-enriched R4: 1.901/0.01128

 1.686 0.731 - - - - 0.955 Mlig455_035167 {REF} {Length: 2562} {Pfam: ADP-ribosyl cyclase [PF02267.19, score=167.1]} {RNA1509_44710} {RNA1310_17806, RNA1509_44710} {RNA1509_44710, RNA815_24749}
22. MligTC455_52146 827 17.23 Mlig455_032252

Neo: -

Age: logFC(26M/2M)=-0.952

 TRPM3 0.967 - - - 0.967 - - Mlig455_032252 {REF} {Length: 6060} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=72.4]; Ankyrin repeats (many copies) [PF13857.8, score=66.1]; Ankyrin repeats (many copies) [PF13637.8, score=61.9]; Ankyrin repeat [PF00023.32, score=39.9]; Ankyrin repeat [PF13606.8, score=32.8]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=73.9, Expect=2e-12]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=4e-12]; ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=73.2, Expect=4e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=75.9, Expect=4e-13]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=75.1, Expect=7e-13]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=74.7, Expect=8e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=77.0, Expect=1e-13]} {Celegans: WBGene00020293, nep-20, NEPrilysin metallopeptidase family, [Score=59.3, Expect=2e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=107, Expect=2e-23]} {RNA1509_16507} {RNA1310_1619} {RNA815_2087}
23. MligTC455_26608 1940 40.41 Mlig455_041390, Mlig455_069356

Neo: -

Age: Up-Down-Up

 UVRAG 0.966 - - - 0.966 - -

Mlig455_041390 {REF} {Length: 2829} {TRANSSPLICED} {Pfam: Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=38.5]} {Human: ENSG00000198382, UVRAG, UV radiation resistance associated, [RH, Score=85.1, Expect=1e-16]} {Mouse: ENSMUSG00000035354, Uvrag, UV radiation resistance associated gene, [RH, Score=85.5, Expect=8e-17]} {Dmel: FBgn0032499, Uvrag, UV-resistance associated gene, [RH, Score=58.5, Expect=1e-08]} {RNA1509_12878, RNA1509_54980} {RNA1310_8382, RNA1509_54980} {RNA1509_54980, RNA815_22184}

Mlig455_069356 {REF} {Length: 2738} {TRANSSPLICED} {Pfam: Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=40.0]} {Human: ENSG00000198382, UVRAG, UV radiation resistance associated, [RH, Score=85.9, Expect=3e-17]} {Mouse: ENSMUSG00000035354, Uvrag, UV radiation resistance associated gene, [RH, Score=86.3, Expect=2e-17]} {Dmel: FBgn0032499, Uvrag, UV-resistance associated gene, [RH, Score=57.8, Expect=1e-08]} {RNA1509_12878} {RNA1310_8382} {RNA815_22184}
24. MligTC455_42334 1589 33.1 Mlig455_022785

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.524

Region-specific R5: 3.885

Region-enriched R5: 3.849/0.00000

 CTSL 0.965 - - - 0.965 - - Mlig455_022785 {REF} {Length: 1818} {TRANSSPLICED} {Pfam: Papain family cysteine protease [PF00112.25, score=284.4]; Cathepsin propeptide inhibitor domain (I29) [PF08246.14, score=47.9]; Peptidase C1-like family [PF03051.17, score=22.6]} {Human: ENSG00000135047, CTSL, cathepsin L, [Score=335, Expect=4e-113]; ENSG00000136943, CTSV, cathepsin V, [Score=332, Expect=5e-112]} {Mouse: ENSMUSG00000021477, Ctsl, cathepsin L, [Score=331, Expect=6e-112]; ENSMUSG00000042243, BC051665, cDNA sequence BC051665, [Score=317, Expect=2e-106]} {Dmel: FBgn0013770, Cp1, Cysteine proteinase-1, [Score=358, Expect=8e-123]} {Celegans: WBGene00000776, cpl-1, CathePsin L family, [RH, Score=339, Expect=3e-115]} {Smed: dd_Smed_v6_48_0_1, dd_Smed_v6_48_0_1, [Score=362, Expect=2e-124]} {RNA1509_18771, RNA1509_3570, RNA1509_5553} {RNA1310_23406.1, RNA1509_18771, RNA1509_3570, RNA1509_5553} {RNA1509_18771, RNA1509_3570, RNA1509_5553, RNA815_6973.1}
25. MligTC455_44082 1524 31.75 Mlig455_000547

Neo: -

Age: logFC(26M/2M)=-0.310

Region-enriched R4: 1.014/0.01171

 SLC30A1 0.961 - - - 0.961 - - Mlig455_000547 {REF} {Length: 4129} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=161.1]} {Human: ENSG00000170385, SLC30A1, solute carrier family 30 member 1, [Score=235, Expect=2e-70]} {Mouse: ENSMUSG00000037434, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=235, Expect=1e-70]; ENSMUSG00000110850, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=235, Expect=1e-70]} {Dmel: FBgn0035432, ZnT63C, Zinc transporter 63C, [Score=146, Expect=3e-38]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=92.0, Expect=1e-19]} {Smed: dd_Smed_v6_3042_0_1, dd_Smed_v6_3042_0_1, [Score=301, Expect=4e-97]} {RNA1509_16572, RNA1509_18374, RNA1509_32458, RNA1509_43388, RNA1509_48373, RNA1509_48567, RNA1509_48958, RNA1509_51367} {RNA1310_16932, RNA1509_16572, RNA1509_18374, RNA1509_32458, RNA1509_43388, RNA1509_48373, RNA1509_48567, RNA1509_48958, RNA1509_51367} {RNA1509_16572, RNA1509_18374, RNA1509_32458, RNA1509_43388, RNA1509_48373, RNA1509_48567, RNA1509_48958, RNA1509_51367, RNA815_13815}
26. MligTC455_31182 1394 29.04 Mlig455_053151

Neo: -

Age: -

Region-enriched R6: 3.486/0.00001
Region-enriched R5: 3.334/0.00000
Region-enriched R4: 3.071/0.00047
Region-enriched R3: 2.674/0.00253

 ANPEP 0.959 - - - 0.959 - - Mlig455_053151 {REF} {Length: 4509} {Pfam: ERAP1-like C-terminal domain [PF11838.10, score=262.3]; Peptidase family M1 domain [PF01433.22, score=247.1]; Peptidase M1 N-terminal domain [PF17900.3, score=145.8]} {Human: ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [RH, Score=581, Expect=0.0]} {Mouse: ENSMUSG00000039062, Anpep, alanyl (membrane) aminopeptidase, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0039640, CG14516, [RH, Score=538, Expect=9e-176]} {Celegans: WBGene00011587, T07F10.1, Aminopeptidase, [RH, Score=436, Expect=8e-137]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [RH, Score=639, Expect=0.0]} {RNA1509_13872, RNA1509_1573, RNA1509_32492} {RNA1310_1662.1, RNA1509_13872, RNA1509_32492} {RNA1509_13872, RNA1509_32492, RNA815_486.1}
27. MligTC455_42335 1565 32.61 Mlig455_022967

Neo: Irradiation

Age: logFC(26M/2M)=0.408

Region-specific R5: 3.926

Region-enriched R5: 3.882/0.00000

 CTSL 0.959 - - - 0.959 - - Mlig455_022967 {REF} {Length: 1542} {TRANSSPLICED} {Pfam: Papain family cysteine protease [PF00112.25, score=136.2]; Cathepsin propeptide inhibitor domain (I29) [PF08246.14, score=48.4]} {Human: ENSG00000135047, CTSL, cathepsin L, [Score=199, Expect=1e-61]; ENSG00000136943, CTSV, cathepsin V, [Score=190, Expect=7e-58]} {Mouse: ENSMUSG00000021477, Ctsl, cathepsin L, [Score=191, Expect=2e-58]; ENSMUSG00000042243, BC051665, cDNA sequence BC051665, [Score=189, Expect=8e-58]; ENSMUSG00000056728, Ctsll3, cathepsin L-like 3, [Score=182, Expect=2e-55]} {Dmel: FBgn0013770, Cp1, Cysteine proteinase-1, [Score=210, Expect=6e-66]} {Celegans: WBGene00000776, cpl-1, CathePsin L family, [Score=194, Expect=4e-60]} {Smed: dd_Smed_v6_48_0_1, dd_Smed_v6_48_0_1, [Score=223, Expect=2e-71]} {RNA1509_33936} {RNA1310_25515.1, RNA1509_33936} {RNA1509_33936, RNA815_6973.1}
28. MligTC455_38536 1494 31.12 Mlig455_068146

Neo: -

Age: logFC(26M/2M)=-0.338

 PSMB7 0.957 - - - 0.957 - - Mlig455_068146 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=169.0]} {Human: ENSG00000136930, PSMB7, proteasome subunit beta 7, [RH, Score=319, Expect=2e-109]} {Mouse: ENSMUSG00000026750, Psmb7, proteasome (prosome, macropain) subunit, beta type 7, [RH, Score=319, Expect=1e-109]} {Dmel: FBgn0023174, Prosbeta2, Proteasome beta2 subunit, [RH, Score=287, Expect=4e-97]} {Celegans: WBGene00003948, pbs-2, Proteasome subunit beta type, [RH, Score=198, Expect=4e-62]} {Smed: dd_Smed_v6_1264_0_1, dd_Smed_v6_1264_0_1, [RH, Score=298, Expect=1e-101]} {RNA1509_11730} {RNA1310_16755.1} {RNA815_14858}
29. MligTC455_50691 108 2.24 Mlig455_060074

Neo: -

Age: Down-Up-Up

 PSAP 0.957 - - - - - 0.957 Mlig455_060074 {REF} {Length: 2234} {Pfam: Saposin-like type B, region 2 [PF03489.19, score=60.5]; Saposin A-type domain [PF02199.17, score=41.8]; Saposin-like type B, region 1 [PF05184.17, score=33.5]} {Human: ENSG00000197746, PSAP, prosaposin, [Score=87.4, Expect=4e-18]} {Mouse: ENSMUSG00000004207, Psap, prosaposin, [Score=85.1, Expect=2e-17]} {Smed: dd_Smed_v6_2944_0_1, dd_Smed_v6_2944_0_1, [Score=47.8, Expect=5e-06]} {RNA1509_29018, RNA1509_37661} {RNA1310_18934, RNA1509_29018, RNA1509_37661} {RNA1509_29018, RNA1509_37661, RNA815_36123}
30. MligTC455_25362 87 1.82 Mlig455_040990, Mlig455_056413

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.568

Region-enriched R4: 4.366/0.01154

 0.956 - - - - - 0.956

Mlig455_040990 {REF} {Length: 969} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=63.6]; Thymidylate kinase [PF02223.19, score=29.8]; AAA domain [PF13238.8, score=19.4]} {RNA1509_25070} {RNA1310_555.3} {RNA815_552.1}

Mlig455_056413 {REF} {Length: 2918} {RNA1509_59253} {RNA1310_555.3, RNA1509_59253} {RNA1509_59253, RNA815_552.1}
31. MligTC455_08784 74 1.55 Mlig455_018978

Neo: -

Age: -

Region-enriched R4: 3.721/0.00921

 0.955 - - - - - 0.955 Mlig455_018978 {REF} {Length: 741} {RNA1310_46406}
32. MligTC455_46609 2150 44.79 Mlig455_053851

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.194

Region-enriched R5: 1.084/0.00000

 CNIH1 0.953 - - - 0.953 - - Mlig455_053851 {REF} {Length: 1914} {Pfam: Cornichon protein [PF03311.16, score=151.4]} {Human: ENSG00000100528, CNIH1, cornichon family AMPA receptor auxiliary protein 1, [RH, Score=178, Expect=5e-58]} {Mouse: ENSMUSG00000015759, Cnih1, cornichon family AMPA receptor auxiliary protein 1, [RH, Score=178, Expect=3e-58]} {Dmel: FBgn0000339, cni, cornichon, [RH, Score=198, Expect=2e-66]} {Celegans: WBGene00011648, cni-1, Protein cornichon homolog 1, [RH, Score=176, Expect=1e-57]} {Smed: dd_Smed_v6_3713_0_1, dd_Smed_v6_3713_0_1, [RH, Score=184, Expect=4e-61]} {RNA1509_16720, RNA1509_48707, RNA1509_7949, RNA1509_8602} {RNA1310_42536, RNA1509_16720, RNA1509_48707, RNA1509_7949, RNA1509_8602} {RNA1509_16720, RNA1509_48707, RNA1509_7949, RNA1509_8602, RNA815_20742}
33. MligTC455_46673 2511 52.31 Mlig455_001920

Neo: -

Age: -

 WAS 0.953 - - - 0.953 - - Mlig455_001920 {REF} {Length: 3207} {Pfam: WH1 domain [PF00568.25, score=84.7]; P21-Rho-binding domain [PF00786.30, score=27.1]; WH2 motif [PF02205.22, score=19.9]} {Human: ENSG00000015285, WAS, Wiskott-Aldrich syndrome, [RH, Score=138, Expect=7e-35]} {Mouse: ENSMUSG00000029684, Wasl, Wiskott-Aldrich syndrome-like (human), [RH, Score=98.6, Expect=2e-23]} {Dmel: FBgn0024273, WASp, [Score=93.2, Expect=8e-20]} {Smed: dd_Smed_v6_1987_0_1, dd_Smed_v6_1987_0_1, [RH, Score=79.7, Expect=8e-16]} {RNA1509_15317, RNA1509_16868, RNA1509_3515} {RNA1310_20700, RNA1509_15317, RNA1509_16868, RNA1509_3515} {RNA1509_15317, RNA1509_16868, RNA1509_3515, RNA815_12150.1}
34. MligTC455_42529 1053 21.93 Mlig455_050818

Neo: Irradiation

Age: logFC(26M/2M)=0.320

Region-specific R5: 4.061

Region-enriched R5: 3.801/0.00000
Region-enriched R6: 2.361/0.00459

 0.952 - - - 0.952 - - Mlig455_050818 {REF} {Length: 1422} {TRANSSPLICED} {RNA1509_10427, RNA1509_20462, RNA1509_24340} {RNA1310_21686, RNA1509_10427, RNA1509_20462, RNA1509_24340} {RNA1509_10427, RNA1509_20462, RNA1509_24340, RNA815_8467.1}
35. MligTC455_21562 1621 33.76 Mlig455_060592

Neo: -

Age: -

Region-enriched R5: 1.227/0.00001

 SCAMP1 0.95 - - - 0.950 - - Mlig455_060592 {REF} {Length: 3000} {TRANSSPLICED} {Pfam: SCAMP family [PF04144.15, score=200.1]} {Human: ENSG00000085365, SCAMP1, secretory carrier membrane protein 1, [RH, Score=261, Expect=6e-85]; ENSG00000140497, SCAMP2, secretory carrier membrane protein 2, [RH, Score=248, Expect=6e-80]} {Mouse: ENSMUSG00000021687, Scamp1, secretory carrier membrane protein 1, [RH, Score=262, Expect=2e-85]} {Dmel: FBgn0040285, Scamp, [RH, Score=235, Expect=6e-75]} {Celegans: WBGene00004743, scm-1, Secretory carrier-associated membrane protein, [Score=192, Expect=2e-58]} {Smed: dd_Smed_v6_8593_0_1, dd_Smed_v6_8593_0_1, [RH, Score=238, Expect=5e-77]} {RNA1509_19649} {RNA1310_11060.1} {RNA815_1980.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA