Data search
Results for MligTC455_41808
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41808 | 221 | 4.60 | Mlig455_062501 | Neo: Irradiation Age: logFC(26M/2M)=0.280 |
Mlig455_062501 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=26.7]} {Celegans: WBGene00009553, hinf-1, HIstone Nuclear Factor p (P) homolog, [Score=51.6, Expect=2e-06]} {RNA1509_17341} {RNA1310_16943} {RNA815_24677.1} |
Cumulative graph for MligTC455_41808
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.706 | 2.795 | 0.66341 | 1.00000 | |
| RegionR2 | -0.35 | 2.795 | 0.65159 | 0.98618 | |
| RegionR3 | -0.177 | 2.795 | 0.77671 | 1.00000 | |
| RegionR4 | -0.592 | 2.795 | 0.35221 | 0.67413 | |
| RegionR5 | 1.176 | 2.795 | 0.01274 | 0.06899 | |
| RegionR6 | 0.58 | 2.795 | 0.32416 | 0.91350 | |
| RegionR7 | 0.141 | 2.795 | 0.86297 | 1.00000 | |
| RegionR8 | -0.072 | 2.795 | 0.94633 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.435 | 2.795 | 0.31730 | 1.00000 | |
| RegenerationR2 | 0.511 | 2.795 | 0.39189 | 0.80907 | |
| RegenerationR3 | 0.331 | 2.795 | 0.60835 | 0.91187 | |
| RegenerationR4 | 0.935 | 2.795 | 0.12410 | 0.53561 | |
| RegenerationR5 | -0.098 | 2.795 | 0.84462 | 1.00000 | |
| RegenerationR6 | 0.566 | 2.795 | 0.32877 | 0.67514 | |
| RegenerationBL | -1.292 | 2.795 | 0.20243 | 0.54159 | |
| RegenerationTP | 0.184 | 2.795 | 0.84008 | 1.00000 |
Genes with expression patterns similar to MligTC455_41808
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41808 | 221 | 4.6 | Mlig455_062501 | Neo: Irradiation Age: logFC(26M/2M)=0.280 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062501 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=26.7]} {Celegans: WBGene00009553, hinf-1, HIstone Nuclear Factor p (P) homolog, [Score=51.6, Expect=2e-06]} {RNA1509_17341} {RNA1310_16943} {RNA815_24677.1} | |
| 2. | MligTC455_45274 | 60 | 1.26 | Mlig455_047931 | Neo: - Age: - Region-enriched R5: 2.784/0.04619 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_047931 {REF} {Length: 1006} {NoTransDecoderORF} {RNA1310_43124} {RNA815_22128} | |
| 3. | MligTC455_30306 | 147 | 3.06 | Mlig455_029651 | Neo: - Age: logFC(26M/2M)=-0.342 Region-enriched R5: 1.839/0.00256 |
CASP7 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_029651 {REF} {Length: 4026} {Pfam: Caspase domain [PF00656.24, score=60.8]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=83.6, Expect=1e-18]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=84.0, Expect=3e-19]; ENSMUSG00000027997, Casp6, caspase 6, [Score=80.1, Expect=6e-18]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=64.3, Expect=2e-12]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=55.8, Expect=2e-09]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=80.9, Expect=1e-18]} {RNA1509_33490, RNA1509_44077} {RNA1310_23085, RNA1509_33490, RNA1509_44077} {RNA1509_33490, RNA1509_44077, RNA815_9619} |
| 4. | MligTC455_44784 | 318 | 6.63 | Mlig455_053700 | Neo: - Age: - |
MKRN1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_053700 {REF} {Length: 2828} {TRANSSPLICED} {Pfam: Torus domain [PF16131.7, score=53.0]; CHY zinc finger [PF05495.14, score=51.1]; Zinc finger domain [PF18345.3, score=49.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=44.5]; CCCH-type zinc finger [PF18044.3, score=34.5]; Zinc-finger containing family [PF15663.7, score=19.6]} {Human: ENSG00000133606, MKRN1, makorin ring finger protein 1, [RH, Score=47.0, Expect=5e-06]} {Mouse: ENSMUSG00000029922, Mkrn1, makorin, ring finger protein, 1, [Score=47.8, Expect=8e-06]} {RNA1509_13070} {RNA1310_6209} {RNA815_10322} |
| 5. | MligTC455_22104 | 54 | 1.12 | Mlig455_018878 | Neo: - Age: - |
RTL1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_018878 {REF} {Length: 3742} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.3]; Integrase core domain [PF00665.28, score=28.2]; Integrase core domain [PF13683.8, score=20.8]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=228, Expect=7e-66]} {RNA1509_36857} {RNA1310_23998} {RNA815_6067.1} |
| 6. | MligTC455_52130 | 509 | 10.61 | Mlig455_007249 | Neo: Irradiation Age: - |
KRI1 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_007249 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=60.1]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.9, Expect=6e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.5, Expect=2e-12]} {RNA1509_9111} {RNA1310_8671.1} {RNA815_11251} |
| 7. | MligTC455_43629 | 506 | 10.55 | Mlig455_044203 | Neo: Neoblast, stringent Age: - |
G2E3 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_044203 {REF} {Length: 2493} {Pfam: PHD-like zinc-binding domain [PF13771.8, score=44.9]} {Human: ENSG00000092140, G2E3, G2/M-phase specific E3 ubiquitin protein ligase, [RH, Score=155, Expect=3e-40]} {Mouse: ENSMUSG00000035293, G2e3, G2/M-phase specific E3 ubiquitin ligase, [RH, Score=144, Expect=2e-36]; ENSMUSG00000021902, Phf7, PHD finger protein 7, [RH, Score=137, Expect=2e-36]} {Dmel: FBgn0005683, pie, pineapple eye, [RH, Score=110, Expect=2e-25]} {Smed: dd_Smed_v6_6301_0_1, dd_Smed_v6_6301_0_1, [RH, Score=116, Expect=5e-28]} {RNA1509_40157} {RNA1310_12923.2, RNA1509_40157} {RNA1509_40157, RNA815_4856} |
| 8. | MligTC455_43005 | 10 | 0.22 | Mlig455_060503 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_060503 {REF} {Length: 608} {NoTransDecoderORF} {RNA1310_134363} |
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