TomoSeq data search

Data search

Results for MligTC455_45274

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_45274	60	1.26	Mlig455_047931	Neo: - Age: - Region-enriched R5: 2.784/0.04619		Mlig455_047931 {REF} {Length: 1006} {NoTransDecoderORF} {RNA1310_43124} {RNA815_22128}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_45274

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.177	1.696	0.99986	1.00000
RegionR2	-0.231	1.696	0.73664	1.00000
RegionR3	2.792	1.696	0.01478	0.19550
RegionR4	2.774	1.696	0.03066	0.13792
RegionR5	2.784	1.696	0.00736	0.04619
RegionR6	1.971	1.696	0.12585	0.64429
RegionR7	-3.517	1.696	1.00000	1.00000
RegionR8	-3.396	1.696	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.348	1.696	0.99999	1.00000
RegenerationR2	0.9	1.696	0.31393	0.75344
RegenerationR3	-1.263	1.696	0.11601	0.53123
RegenerationR4	-1.597	1.696	0.10501	0.49954
RegenerationR5	-0.693	1.696	0.30863	0.73491
RegenerationR6	-1.558	1.696	0.11070	0.41035
RegenerationBL	-1.856	1.696	0.99968	1.00000
RegenerationTP	-0.226	1.696	0.99995	1.00000

Genes with expression patterns similar to MligTC455_45274

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45274	60	1.26	Mlig455_047931	Neo: - Age: - Region-enriched R5: 2.784/0.04619		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_047931 {REF} {Length: 1006} {NoTransDecoderORF} {RNA1310_43124} {RNA815_22128}
2.	MligTC455_35557	70	1.47	Mlig455_004810	Neo: - Age: Down-Up-Down		1.758	0.808	-	-	-	-	0.950	Mlig455_004810 {REF} {Length: 2057} {TRANSSPLICED} {RNA1509_19516} {RNA1310_24351, RNA1509_19516} {RNA1509_19516, RNA815_19611}
3.	MligTC455_18200	126	2.62	Mlig455_026423, Mlig455_044776, Mlig455_053675	Neo: - Age: - Region-enriched R4: 6.407/0.01455		0.985	-	-	0.985	-	-	-	Mlig455_026423 {REF} {Length: 966} {NoTransDecoderORF} {RNA1310_73231} Mlig455_044776 {REF} {Length: 966} {NoTransDecoderORF} {RNA1310_73231} Mlig455_053675 {REF} {Length: 210} {NoTransDecoderORF} {RNA1310_73231}
4.	MligTC455_31606	113	2.36	Mlig455_019067, Mlig455_064336	Neo: Int S/G2/M Age: Up-Down-Down	ATR	0.977	-	-	0.977	-	-	-	Mlig455_019067 {REF} {Length: 4939} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=186.2]; FAT domain [PF02259.25, score=68.0]; FATC domain [PF02260.22, score=42.8]} {Human: ENSG00000175054, ATR, ATR serine/threonine kinase, [RH, Score=638, Expect=0.0]} {Mouse: ENSMUSG00000032409, Atr, ataxia telangiectasia and Rad3 related, [RH, Score=649, Expect=0.0]} {Dmel: FBgn0004367, mei-41, meiotic 41, [RH, Score=476, Expect=4e-140]} {Celegans: WBGene00000226, atl-1, Serine/threonine-protein kinase ATR, [RH, Score=226, Expect=4e-60]} {Smed: dd_Smed_v6_8754_0_1, dd_Smed_v6_8754_0_1, [RH, Score=528, Expect=1e-159]} {RNA1509_16317} {RNA1310_16516} Mlig455_064336 {REF} {Length: 5998} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=186.3]; FAT domain [PF02259.25, score=67.2]; FATC domain [PF02260.22, score=42.7]} {Human: ENSG00000175054, ATR, ATR serine/threonine kinase, [Score=589, Expect=1e-176]} {Mouse: ENSMUSG00000032409, Atr, ataxia telangiectasia and Rad3 related, [Score=597, Expect=1e-179]} {Dmel: FBgn0004367, mei-41, meiotic 41, [RH, Score=469, Expect=3e-136]} {Celegans: WBGene00000226, atl-1, Serine/threonine-protein kinase ATR, [RH, Score=223, Expect=3e-58]} {Smed: dd_Smed_v6_8754_0_1, dd_Smed_v6_8754_0_1, [RH, Score=473, Expect=4e-139]} {RNA1509_16317} {RNA1310_16516}
5.	MligTC455_42745	91	1.9	Mlig455_056506	Neo: - Age: Down-Up-Down Region-enriched R5: 3.225/0.01833	ACSF2	0.977	-	-	0.977	-	-	-	Mlig455_056506 {REF} {Length: 2479} {Pfam: AMP-binding enzyme [PF00501.30, score=356.0]; AMP-binding enzyme C-terminal domain [PF13193.8, score=66.2]} {Human: ENSG00000167107, ACSF2, acyl-CoA synthetase family member 2, [Score=185, Expect=1e-50]} {Mouse: ENSMUSG00000076435, Acsf2, acyl-CoA synthetase family member 2, [Score=207, Expect=5e-59]} {Dmel: FBgn0027601, pdgy, pudgy, [RH, Score=338, Expect=7e-109]} {Celegans: WBGene00008669, acs-14, Fatty Acid CoA Synthetase family, [RH, Score=324, Expect=2e-104]} {Smed: dd_Smed_v6_10135_0_1, dd_Smed_v6_10135_0_1, [RH, Score=406, Expect=3e-136]} {RNA1509_10470} {RNA1310_9287, RNA1509_10470} {RNA1509_10470, RNA815_3513}
6.	MligTC455_40725	90	1.88	Mlig455_024305, Mlig455_024360, Mlig455_024474	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_024305 {REF} {Length: 629} {NoTransDecoderORF} {RNA1509_59556} {RNA1310_75707.1} Mlig455_024360 {REF} {Length: 2023} {NoTransDecoderORF} {RNA1509_59556} {RNA1310_55430} Mlig455_024474 {REF} {Length: 2205} {NoTransDecoderORF} {RNA1509_59556} {RNA1310_55430, RNA1509_59556}
7.	MligTC455_27006	2221	46.26	Mlig455_033694, Mlig455_050136	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.312 Region-enriched R5: 1.026/0.01077		0.972	-	-	-	-	0.972	-	Mlig455_033694 {REF} {Length: 935} {TRANSSPLICED} {RNA1509_11770, RNA1509_47889} {RNA1310_35449.1, RNA1509_47889} {RNA1509_47889, RNA815_19150} Mlig455_050136 {REF} {Length: 935} {TRANSSPLICED} {RNA1509_11770, RNA1509_25611} {RNA1310_35449.1, RNA1509_11770, RNA1509_25611} {RNA1509_11770, RNA1509_25611, RNA815_19150}
8.	MligTC455_40187	270	5.62	Mlig455_049370	Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.494		0.97	-	-	-	-	0.970	-	Mlig455_049370 {REF} {Length: 5146} {TRANSSPLICED} {RNA1509_31164, RNA1509_58180} {RNA1310_1836, RNA1509_58180} {RNA1509_58180, RNA815_1211}
9.	MligTC455_09997	72	1.5	Mlig455_065845	Neo: - Age: Up-Down-Down		0.966	-	-	-	-	-	0.966	Mlig455_065845 {REF} {Length: 1218} {NoTransDecoderORF} {RNA1509_56298} {RNA1310_42236} {RNA815_50969}
10.	MligTC455_17916	136	2.84	Mlig455_049602	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.658		0.965	-	-	0.965	-	-	-	Mlig455_049602 {REF} {Length: 643} {RNA1310_87578} {RNA815_52625}
11.	MligTC455_44784	318	6.63	Mlig455_053700	Neo: - Age: -	MKRN1	0.965	-	-	-	-	0.965	-	Mlig455_053700 {REF} {Length: 2828} {TRANSSPLICED} {Pfam: Torus domain [PF16131.7, score=53.0]; CHY zinc finger [PF05495.14, score=51.1]; Zinc finger domain [PF18345.3, score=49.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=44.5]; CCCH-type zinc finger [PF18044.3, score=34.5]; Zinc-finger containing family [PF15663.7, score=19.6]} {Human: ENSG00000133606, MKRN1, makorin ring finger protein 1, [RH, Score=47.0, Expect=5e-06]} {Mouse: ENSMUSG00000029922, Mkrn1, makorin, ring finger protein, 1, [Score=47.8, Expect=8e-06]} {RNA1509_13070} {RNA1310_6209} {RNA815_10322}
12.	MligTC455_41808	221	4.6	Mlig455_062501	Neo: Irradiation Age: logFC(26M/2M)=0.280		0.963	-	-	-	-	0.963	-	Mlig455_062501 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=26.7]} {Celegans: WBGene00009553, hinf-1, HIstone Nuclear Factor p (P) homolog, [Score=51.6, Expect=2e-06]} {RNA1509_17341} {RNA1310_16943} {RNA815_24677.1}
13.	MligTC455_43005	10	0.22	Mlig455_060503	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_060503 {REF} {Length: 608} {NoTransDecoderORF} {RNA1310_134363}
14.	MligTC455_47817	284	5.91	Mlig455_046861	Neo: - Age: -	SDR42E1	0.958	-	-	-	-	-	0.958	Mlig455_046861 {REF} {Length: 2105} {TRANSSPLICED} {Pfam: 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=205.8]; NAD dependent epimerase/dehydratase family [PF01370.23, score=110.8]; RmlD substrate binding domain [PF04321.19, score=65.7]; GDP-mannose 4,6 dehydratase [PF16363.7, score=48.6]; NAD(P)H-binding [PF13460.8, score=39.7]; Male sterility protein [PF07993.14, score=39.5]; Polysaccharide biosynthesis protein [PF02719.17, score=27.0]} {Human: ENSG00000184860, SDR42E1, short chain dehydrogenase/reductase family 42E, member 1, [RH, Score=316, Expect=6e-105]} {Mouse: ENSMUSG00000034308, Sdr42e1, short chain dehydrogenase/reductase family 42E, member 1, [RH, Score=313, Expect=9e-104]} {Dmel: FBgn0036698, CG7724, [Score=58.9, Expect=3e-09]} {Celegans: WBGene00012394, hsd-1, HydroxySteroid Dehydrogenase homolog, [RH, Score=120, Expect=4e-30]} {RNA1509_53922} {RNA1310_22604.1} {RNA815_25343}
15.	MligTC455_30702	48	1	Mlig455_004774	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_004774 {REF} {Length: 1942} {Pfam: Mab-21 protein [PF03281.16, score=25.2]} {RNA1509_13499} {RNA1310_32502} {RNA815_923}
16.	MligTC455_24267	26	0.54	Mlig455_005114, Mlig455_005116, Mlig455_005118	Neo: - Age: -	CHRNA7	0.951	-	-	0.951	-	-	-	Mlig455_005114 {REF} {Length: 1666} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=114.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=64.3]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=146, Expect=3e-38]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=145, Expect=4e-38]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=143, Expect=3e-37]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=144, Expect=9e-38]; ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=138, Expect=9e-36]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=134, Expect=8e-34]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_12182_0_1, dd_Smed_v6_12182_0_1, [Score=135, Expect=1e-34]} {RNA1509_43533} {RNA1310_21349.1} {RNA815_22406} Mlig455_005116 {REF} {Length: 1663} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=114.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=63.3]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=146, Expect=3e-38]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=145, Expect=4e-38]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=143, Expect=3e-37]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=144, Expect=8e-38]; ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=138, Expect=9e-36]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=134, Expect=9e-34]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_12182_0_1, dd_Smed_v6_12182_0_1, [Score=135, Expect=1e-34]} {RNA1509_43533} {RNA1310_21349.1} {RNA815_22406} Mlig455_005118 {REF} {Length: 1662} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=114.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=63.3]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=146, Expect=3e-38]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=145, Expect=4e-38]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=143, Expect=3e-37]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=144, Expect=8e-38]; ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=138, Expect=9e-36]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=134, Expect=9e-34]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_12182_0_1, dd_Smed_v6_12182_0_1, [Score=135, Expect=1e-34]} {RNA1509_43533} {RNA1310_21349.1} {RNA815_22406}
17.	MligTC455_41688	92	1.93	Mlig455_049719, Mlig455_052849	Neo: Germline Age: -		0.951	-	-	0.951	-	-	-	Mlig455_049719 {REF} {Length: 1078} {NoTransDecoderORF} {RNA1310_141750} {RNA815_61478} Mlig455_052849 {REF} {Length: 3482} {NoTransDecoderORF} {RNA1509_36480} {RNA1310_129329} {RNA815_34453}
18.	MligTC455_47735	70	1.45	Mlig455_054644	Neo: - Age: - Region-enriched R3: 5.950/0.00023		0.951	-	-	0.951	-	-	-	Mlig455_054644 {REF} {Length: 804} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=37.7]} {RNA1509_39145} {RNA1310_42379.1} {RNA815_34286.1}
19.	MligTC455_11387	14	0.29	Mlig455_030326	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_030326 {REF} {Length: 829} {NoTransDecoderORF} {RNA1509_23562} {RNA1310_94583} {RNA815_47071}
20.	MligTC455_17843	74	1.55	Mlig455_010069, Mlig455_063252, Mlig455_063277	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_010069 {REF} {Length: 64} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42489} {RNA1310_14879} {RNA815_7053} Mlig455_063252 {REF} {Length: 64} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42489} {RNA1310_14879} {RNA815_7053} Mlig455_063277 {REF} {Length: 64} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42489} {RNA1310_14879} {RNA815_7053}
21.	MligTC455_36643	194	4.04	Mlig455_041343	Neo: - Age: Up-Down-Up		0.95	-	-	-	0.950	-	-	Mlig455_041343 {REF} {Length: 847} {RNA1509_40031} {RNA1310_41959.1} {RNA815_19701}
22.	MligTC455_52130	509	10.61	Mlig455_007249	Neo: Irradiation Age: -	KRI1	0.95	-	-	-	-	0.950	-	Mlig455_007249 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=60.1]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.9, Expect=6e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.5, Expect=2e-12]} {RNA1509_9111} {RNA1310_8671.1} {RNA815_11251}