Data search
Results for MligTC455_44784
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44784 | 318 | 6.63 | Mlig455_053700 | Neo: - Age: - |
MKRN1 | Mlig455_053700 {REF} {Length: 2828} {TRANSSPLICED} {Pfam: Torus domain [PF16131.7, score=53.0]; CHY zinc finger [PF05495.14, score=51.1]; Zinc finger domain [PF18345.3, score=49.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=44.5]; CCCH-type zinc finger [PF18044.3, score=34.5]; Zinc-finger containing family [PF15663.7, score=19.6]} {Human: ENSG00000133606, MKRN1, makorin ring finger protein 1, [RH, Score=47.0, Expect=5e-06]} {Mouse: ENSMUSG00000029922, Mkrn1, makorin, ring finger protein, 1, [Score=47.8, Expect=8e-06]} {RNA1509_13070} {RNA1310_6209} {RNA815_10322} |
Cumulative graph for MligTC455_44784
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.319 | 3.385 | 0.40885 | 1.00000 | |
| RegionR2 | 0.68 | 3.385 | 0.32675 | 0.71887 | |
| RegionR3 | 0.444 | 3.385 | 0.40289 | 0.93107 | |
| RegionR4 | -0.252 | 3.385 | 0.70573 | 0.99273 | |
| RegionR5 | 0.32 | 3.385 | 0.49536 | 0.85864 | |
| RegionR6 | -0.15 | 3.385 | 0.78660 | 1.00000 | |
| RegionR7 | -0.02 | 3.385 | 0.98226 | 1.00000 | |
| RegionR8 | 0.297 | 3.385 | 0.74432 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.799 | 3.385 | 0.40705 | 1.00000 | |
| RegenerationR2 | -0.057 | 3.385 | 0.92033 | 1.00000 | |
| RegenerationR3 | -0.143 | 3.385 | 0.81629 | 0.98648 | |
| RegenerationR4 | 0.261 | 3.385 | 0.68844 | 0.94842 | |
| RegenerationR5 | 0.294 | 3.385 | 0.59462 | 0.90789 | |
| RegenerationR6 | 0.616 | 3.385 | 0.31918 | 0.66630 | |
| RegenerationBL | -6.253 | 3.385 | 0.00175 | 0.03298 | |
| RegenerationTP | -1.39 | 3.385 | 0.17251 | 0.60509 |
Genes with expression patterns similar to MligTC455_44784
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44784 | 318 | 6.63 | Mlig455_053700 | Neo: - Age: - |
MKRN1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_053700 {REF} {Length: 2828} {TRANSSPLICED} {Pfam: Torus domain [PF16131.7, score=53.0]; CHY zinc finger [PF05495.14, score=51.1]; Zinc finger domain [PF18345.3, score=49.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=44.5]; CCCH-type zinc finger [PF18044.3, score=34.5]; Zinc-finger containing family [PF15663.7, score=19.6]} {Human: ENSG00000133606, MKRN1, makorin ring finger protein 1, [RH, Score=47.0, Expect=5e-06]} {Mouse: ENSMUSG00000029922, Mkrn1, makorin, ring finger protein, 1, [Score=47.8, Expect=8e-06]} {RNA1509_13070} {RNA1310_6209} {RNA815_10322} |
| 2. | MligTC455_52130 | 509 | 10.61 | Mlig455_007249 | Neo: Irradiation Age: - |
KRI1 | 1.805 | - | - | - | 0.828 | 0.977 | - | Mlig455_007249 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=60.1]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.9, Expect=6e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.5, Expect=2e-12]} {RNA1509_9111} {RNA1310_8671.1} {RNA815_11251} |
| 3. | MligTC455_43606 | 1674 | 34.88 | Mlig455_007946, Mlig455_008046, Mlig455_008088 | Neo: - Age: - Region-enriched R5: 1.300/0.00098 |
HNRNPR, SYNCRIP | 1.672 | - | - | - | 0.720 | 0.952 | - | Mlig455_007946 {REF} {Length: 2555} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.0]; LisH [PF08513.13, score=29.4]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=225, Expect=3e-64]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=226, Expect=1e-64]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=1e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=239, Expect=7e-70]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=7e-58]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=134, Expect=2e-32]} {RNA1509_26124} {RNA1310_13847.3} {RNA815_19802} Mlig455_008046 {REF} {Length: 2528} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.0]; LisH [PF08513.13, score=29.4]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=225, Expect=3e-64]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=226, Expect=1e-64]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=1e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=239, Expect=7e-70]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=7e-58]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=134, Expect=2e-32]} {RNA1509_26124} {RNA1310_13847.3} {RNA815_19802} Mlig455_008088 {REF} {Length: 2551} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=88.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.5]; LisH [PF08513.13, score=29.5]} {Human: ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=8e-63]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=8e-63]; ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=223, Expect=2e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=224, Expect=2e-63]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=2e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=237, Expect=2e-69]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=1e-57]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=132, Expect=7e-32]} {RNA1509_26124, RNA1509_26907} {RNA1310_13847.3, RNA1509_26124, RNA1509_26907} {RNA1509_26124, RNA1509_26907, RNA815_19802} |
| 4. | MligTC455_31129 | 1008 | 21 | Mlig455_005615, Mlig455_070184 | Neo: Irradiation Age: logFC(26M/2M)=0.545 Region-specific R5: 1.527 Region-enriched R5: 1.021/0.00725 |
LIG4 | 0.978 | - | - | - | - | 0.978 | - | Mlig455_005615 {REF} {Length: 3975} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=70.9]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.5]; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=57.1]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.4]; RNA ligase [PF09414.12, score=29.0]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.6]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [Score=546, Expect=2e-178]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [Score=541, Expect=7e-177]} {Dmel: FBgn0030506, Lig4, Ligase4, [Score=214, Expect=4e-57]} {Celegans: WBGene00002986, lig-4, LIGase, [RH, Score=127, Expect=1e-29]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [Score=504, Expect=6e-163]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459} Mlig455_070184 {REF} {Length: 3787} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.6]; RNA ligase [PF09414.12, score=29.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=253, Expect=3e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=134, Expect=7e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_4940} {RNA1310_2815, RNA1509_4940} {RNA1509_4940, RNA815_3459} |
| 5. | MligTC455_51318 | 370 | 7.71 | Mlig455_040327 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.854 Region-enriched R5: 1.980/0.00436 |
RAD51C | 0.977 | - | - | - | 0.977 | - | - | Mlig455_040327 {REF} {Length: 1394} {Pfam: Rad51 [PF08423.13, score=138.5]; AAA domain [PF13481.8, score=35.5]; KaiC [PF06745.15, score=18.8]} {Human: ENSG00000108384, RAD51C, RAD51 paralog C, [RH, Score=183, Expect=1e-53]} {Mouse: ENSMUSG00000007646, Rad51c, RAD51 paralog C, [RH, Score=181, Expect=4e-53]} {Dmel: FBgn0003482, spn-D, spindle D, [RH, Score=110, Expect=1e-27]} {Celegans: WBGene00004297, rad-51, RAD51 short isoform; RecA/Rad51/Dmc1-like protein, [Score=70.1, Expect=4e-13]} {Smed: dd_Smed_v6_16724_0_2, dd_Smed_v6_16724_0_2, [RH, Score=184, Expect=2e-55]} {RNA1509_27617} {RNA1310_25633.1} {RNA815_20829} |
| 6. | MligTC455_30306 | 147 | 3.06 | Mlig455_029651 | Neo: - Age: logFC(26M/2M)=-0.342 Region-enriched R5: 1.839/0.00256 |
CASP7 | 0.968 | - | - | - | - | 0.968 | - | Mlig455_029651 {REF} {Length: 4026} {Pfam: Caspase domain [PF00656.24, score=60.8]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=83.6, Expect=1e-18]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=84.0, Expect=3e-19]; ENSMUSG00000027997, Casp6, caspase 6, [Score=80.1, Expect=6e-18]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=64.3, Expect=2e-12]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=55.8, Expect=2e-09]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=80.9, Expect=1e-18]} {RNA1509_33490, RNA1509_44077} {RNA1310_23085, RNA1509_33490, RNA1509_44077} {RNA1509_33490, RNA1509_44077, RNA815_9619} |
| 7. | MligTC455_45274 | 60 | 1.26 | Mlig455_047931 | Neo: - Age: - Region-enriched R5: 2.784/0.04619 |
0.965 | - | - | - | - | 0.965 | - | Mlig455_047931 {REF} {Length: 1006} {NoTransDecoderORF} {RNA1310_43124} {RNA815_22128} | |
| 8. | MligTC455_41808 | 221 | 4.6 | Mlig455_062501 | Neo: Irradiation Age: logFC(26M/2M)=0.280 |
0.961 | - | - | - | - | 0.961 | - | Mlig455_062501 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=26.7]} {Celegans: WBGene00009553, hinf-1, HIstone Nuclear Factor p (P) homolog, [Score=51.6, Expect=2e-06]} {RNA1509_17341} {RNA1310_16943} {RNA815_24677.1} | |
| 9. | MligTC455_46359 | 1639 | 34.15 | Mlig455_002958 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.308 Region-enriched R5: 1.054/0.00491 |
RAE1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_002958 {REF} {Length: 1300} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=43.4]} {Human: ENSG00000101146, RAE1, ribonucleic acid export 1, [RH, Score=397, Expect=2e-137]} {Mouse: ENSMUSG00000027509, Rae1, ribonucleic acid export 1, [RH, Score=392, Expect=9e-136]} {Dmel: FBgn0034646, Rae1, [RH, Score=405, Expect=1e-141]} {Celegans: WBGene00003803, rae-1, mRNA export factor rae-1, [RH, Score=353, Expect=7e-121]} {Smed: dd_Smed_v6_3456_0_1, dd_Smed_v6_3456_0_1, [RH, Score=389, Expect=4e-135]} {RNA1509_12434, RNA1509_33157, RNA1509_55930} {RNA1310_24271, RNA1509_12434, RNA1509_33157, RNA1509_55930} {RNA1509_12434, RNA1509_33157, RNA1509_55930, RNA815_11521} |