Data search
Results for MligTC455_42584
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42584 | 525 | 10.95 | Mlig455_042688 | Neo: - Age: Up-Down-Down |
Mlig455_042688 {REF} {Length: 5118} {RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976} {RNA1310_33323.1, RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976} {RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976, RNA815_23056} |
Cumulative graph for MligTC455_42584
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.387 | 3.775 | 0.43491 | 1.00000 | |
| RegionR2 | 0.438 | 3.775 | 0.38698 | 0.78129 | |
| RegionR3 | 0.276 | 3.775 | 0.51474 | 1.00000 | |
| RegionR4 | 0.42 | 3.775 | 0.40307 | 0.72976 | |
| RegionR5 | -0.335 | 3.775 | 0.47145 | 0.83417 | |
| RegionR6 | 0.188 | 3.775 | 0.66644 | 1.00000 | |
| RegionR7 | -0.002 | 3.775 | 0.99750 | 1.00000 | |
| RegionR8 | 0.402 | 3.775 | 0.56973 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.137 | 3.775 | 0.95581 | 1.00000 | |
| RegenerationR2 | -0.176 | 3.775 | 0.61437 | 0.92090 | |
| RegenerationR3 | 0.06 | 3.775 | 0.88544 | 1.00000 | |
| RegenerationR4 | -0.241 | 3.775 | 0.56947 | 0.90112 | |
| RegenerationR5 | 0.325 | 3.775 | 0.40640 | 0.80320 | |
| RegenerationR6 | 0.219 | 3.775 | 0.59580 | 0.86649 | |
| RegenerationBL | 0.659 | 3.775 | 0.17896 | 0.50768 | |
| RegenerationTP | -0.399 | 3.775 | 0.51590 | 0.91149 |
Genes with expression patterns similar to MligTC455_42584
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42584 | 525 | 10.95 | Mlig455_042688 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042688 {REF} {Length: 5118} {RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976} {RNA1310_33323.1, RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976} {RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976, RNA815_23056} | |
| 2. | MligTC455_27411 | 730 | 15.21 | Mlig455_013620 | Neo: - Age: Up-Down-Down |
TLN1 | 2.5 | 0.805 | - | - | - | 0.745 | 0.950 | Mlig455_013620 {REF} {Length: 10416} {TRANSSPLICED} {Pfam: I/LWEQ domain [PF01608.19, score=164.4]; Talin, middle domain [PF09141.12, score=97.7]; FERM central domain [PF00373.20, score=81.3]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=60.5]; FERM N-terminal domain [PF09379.12, score=33.3]; Vinculin Binding Site [PF08913.12, score=28.0]} {Human: ENSG00000137076, TLN1, talin 1, [Score=1301, Expect=0.0]; ENSG00000171914, TLN2, talin 2, [Score=1278, Expect=0.0]} {Mouse: ENSMUSG00000028465, Tln1, talin 1, [Score=1296, Expect=0.0]; ENSMUSG00000052698, Tln2, talin 2, [Score=1275, Expect=0.0]} {Dmel: FBgn0260442, rhea, [RH, Score=1109, Expect=0.0]} {Celegans: WBGene00006771, tln-1, TaLiN; Talin, [RH, Score=568, Expect=5e-164]} {Smed: dd_Smed_v6_876_0_2, dd_Smed_v6_876_0_2, [RH, Score=894, Expect=0.0]} {RNA1509_15910} {RNA1310_318} {RNA815_75.1} |
| 3. | MligTC455_22520 | 1063 | 22.15 | Mlig455_000386, Mlig455_067959 | Neo: Irradiation Age: Up-Down-Down |
TRANK1 | 1.747 | - | 0.794 | - | - | 0.953 | - | Mlig455_000386 {REF} {Length: 10595} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=28.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.6]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=676, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_45240, RNA1509_48487} {RNA1310_139, RNA1509_45240} {RNA1509_45240, RNA815_523} Mlig455_067959 {REF} {Length: 11658} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=29.4]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1310_139, RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1509_26643, RNA1509_4147, RNA1509_52069, RNA815_523} |
| 4. | MligTC455_47916 | 531 | 11.07 | Mlig455_012925 | Neo: - Age: - |
DNAJB2 | 1.724 | - | - | - | - | 0.774 | 0.950 | Mlig455_012925 {REF} {Length: 2549} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=97.0]} {Human: ENSG00000135924, DNAJB2, DnaJ heat shock protein family (Hsp40) member B2, [Score=121, Expect=7e-32]; ENSG00000179407, DNAJB8, DnaJ heat shock protein family (Hsp40) member B8, [Score=116, Expect=1e-30]} {Mouse: ENSMUSG00000081984, Dnajb3, DnaJ heat shock protein family (Hsp40) member B3, [Score=117, Expect=3e-31]; ENSMUSG00000026203, Dnajb2, DnaJ heat shock protein family (Hsp40) member B2, [Score=115, Expect=1e-29]; ENSMUSG00000048206, Dnajb8, DnaJ heat shock protein family (Hsp40) member B8, [Score=113, Expect=6e-30]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=113, Expect=1e-28]} {Dmel: FBgn0034091, mrj, [Score=147, Expect=2e-42]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=89.7, Expect=2e-20]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=160, Expect=2e-48]} {RNA1509_4874} {RNA1310_28593} {RNA815_3659} |
| 5. | MligTC455_35521 | 1684 | 35.08 | Mlig455_006137 | Neo: - Age: - |
AP3D1 | 1.693 | - | 0.726 | - | - | - | 0.967 | Mlig455_006137 {REF} {Length: 5624} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=428.0]; AP-3 complex subunit delta-1 [PF06375.13, score=64.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=56.9]; HEAT repeats [PF13646.8, score=24.2]; HEAT repeat [PF02985.24, score=22.8]} {Human: ENSG00000065000, AP3D1, adaptor related protein complex 3 subunit delta 1, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000020198, Ap3d1, adaptor-related protein complex 3, delta 1 subunit, [RH, Score=950, Expect=0.0]} {Dmel: FBgn0001087, g, garnet, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00000162, apd-3, AP-3 complex subunit delta, [RH, Score=810, Expect=0.0]} {Smed: dd_Smed_v6_2534_0_1, dd_Smed_v6_2534_0_1, [RH, Score=892, Expect=0.0]} {RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255} {RNA1310_1080.1, RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255} {RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255, RNA815_531.1} |
| 6. | MligTC455_53437 | 710 | 14.78 | Mlig455_043076 | Neo: - Age: - |
MAP3K20 | 1.684 | - | - | - | 0.719 | - | 0.965 | Mlig455_043076 {REF} {Length: 2612} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=203.7]; Protein kinase domain [PF00069.27, score=172.7]; SAM domain (Sterile alpha motif) [PF00536.32, score=33.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=30.1]} {Human: ENSG00000091436, MAP3K20, mitogen-activated protein kinase kinase kinase 20, [RH, Score=324, Expect=2e-98]} {Mouse: ENSMUSG00000004085, Map3k20, mitogen-activated protein kinase kinase kinase 20, [RH, Score=321, Expect=1e-97]} {Dmel: FBgn0036896, wnd, wallenda, [Score=201, Expect=1e-53]} {Celegans: WBGene00006971, zak-1, Mammalian ZAK kinase homolog, [RH, Score=252, Expect=8e-73]} {Smed: dd_Smed_v6_8838_0_1, dd_Smed_v6_8838_0_1, [Score=174, Expect=6e-45]} {RNA1509_14355} {RNA1310_6214.2, RNA1509_14355} {RNA1509_14355, RNA815_4745} |
| 7. | MligTC455_47695 | 1505 | 31.36 | Mlig455_043323 | Neo: - Age: Up-Down-Down Regeneration-upregulated R5: 1.244 Regeneration-enriched R5: 1.244 |
SRRM1 | 1.667 | - | - | - | - | 0.717 | 0.950 | Mlig455_043323 {REF} {Length: 3649} {Pfam: PWI domain [PF01480.19, score=81.0]} {Human: ENSG00000133226, SRRM1, serine and arginine repetitive matrix 1, [RH, Score=181, Expect=6e-47]} {Mouse: ENSMUSG00000028809, Srrm1, serine/arginine repetitive matrix 1, [RH, Score=182, Expect=2e-47]} {Dmel: FBgn0036340, SRm160, [RH, Score=167, Expect=1e-42]} {Celegans: WBGene00004706, rsr-1, SR protein related, [Score=158, Expect=2e-40]} {Smed: dd_Smed_v6_3886_0_1, dd_Smed_v6_3886_0_1, [Score=167, Expect=3e-43]} {RNA1509_17016} {RNA1310_2757.1} {RNA815_383.1} |
| 8. | MligTC455_15413 | 1662 | 34.63 | Mlig455_013746 | Neo: - Age: logFC(26M/2M)=-0.319 |
0.969 | - | - | - | - | - | 0.969 | Mlig455_013746 {REF} {Length: 1221} {TRANSSPLICED} {RNA1509_21862, RNA1509_35971} {RNA1310_6279.1, RNA1509_21862} {RNA1509_21862, RNA815_12125.1} | |
| 9. | MligTC455_20555 | 325 | 6.77 | Mlig455_035815 | Neo: - Age: - |
LRRC56 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_035815 {REF} {Length: 3489} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=35.1]; Leucine rich repeat [PF13855.8, score=30.0]; Leucine-rich repeat [PF14580.8, score=26.7]} {Human: ENSG00000161328, LRRC56, leucine rich repeat containing 56, [RH, Score=222, Expect=2e-64]; ENSG00000273831, LRRC56, leucine rich repeat containing 56, [RH, Score=221, Expect=6e-64]} {Mouse: ENSMUSG00000038637, Lrrc56, leucine rich repeat containing 56, [RH, Score=202, Expect=2e-58]} {Dmel: FBgn0035497, CG14995, [Score=64.3, Expect=1e-10]} {Smed: dd_Smed_v6_10834_0_1, dd_Smed_v6_10834_0_1, [RH, Score=334, Expect=3e-107]} {RNA1509_10058} {RNA1310_11542} {RNA815_9595} |
| 10. | MligTC455_32763 | 1061 | 22.11 | Mlig455_045076 | Neo: - Age: Up-Down-Down |
PRPF8 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_045076 {REF} {Length: 8657} {TRANSSPLICED} {Pfam: PROCN (NUC071) domain [PF08083.13, score=774.2]; PRP8 domain IV core [PF12134.10, score=422.5]; U6-snRNA interacting domain of PrP8 [PF10596.11, score=295.5]; PRO8NT (NUC069), PrP8 N-terminal domain [PF08082.13, score=280.6]; U5-snRNA binding site 2 of PrP8 [PF10597.11, score=241.2]; PROCT (NUC072) domain [PF08084.13, score=166.4]; RNA recognition motif of the spliceosomal PrP8 [PF10598.11, score=148.4]; JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=18.8]} {Human: ENSG00000274442, PRPF8, pre-mRNA processing factor 8, [RH, Score=4199, Expect=0.0]; ENSG00000174231, PRPF8, pre-mRNA processing factor 8, [RH, Score=4199, Expect=0.0]} {Mouse: ENSMUSG00000020850, Prpf8, pre-mRNA processing factor 8, [RH, Score=4199, Expect=0.0]} {Dmel: FBgn0033688, Prp8, pre-mRNA processing factor 8, [RH, Score=4139, Expect=0.0]} {Celegans: WBGene00004187, prp-8, Pre-mRNA-splicing factor 8 homolog, [RH, Score=4034, Expect=0.0]} {Smed: dd_Smed_v6_2504_0_1, dd_Smed_v6_2504_0_1, [RH, Score=3820, Expect=0.0]} {RNA1509_1095, RNA1509_14304, RNA1509_39662} {RNA1310_216, RNA1509_1095, RNA1509_14304, RNA1509_39662} {RNA1509_1095, RNA1509_14304, RNA1509_39662, RNA815_117.1} |
| 11. | MligTC455_06847 | 632 | 13.17 | Mlig455_021833 | Neo: - Age: logFC(26M/2M)=-0.278 Region-enriched R3: 1.828/0.00930 |
MAST4 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_021833 {REF} {Length: 5984} {Pfam: Domain of unknown function (DUF1908) [PF08926.13, score=233.5]; Protein kinase domain [PF00069.27, score=197.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=82.4]; ABC1 atypical kinase-like domain [PF03109.18, score=24.3]; PDZ domain [PF17820.3, score=23.4]; Phosphotransferase enzyme family [PF01636.25, score=22.2]; Kinase-like [PF14531.8, score=17.9]} {Human: ENSG00000069020, MAST4, microtubule associated serine/threonine kinase family member 4, [RH, Score=664, Expect=0.0]; ENSG00000086015, MAST2, microtubule associated serine/threonine kinase 2, [RH, Score=664, Expect=0.0]; ENSG00000099308, MAST3, microtubule associated serine/threonine kinase 3, [RH, Score=636, Expect=0.0]} {Mouse: ENSMUSG00000034751, Mast4, microtubule associated serine/threonine kinase family member 4, [RH, Score=663, Expect=0.0]; ENSMUSG00000003810, Mast2, microtubule associated serine/threonine kinase 2, [RH, Score=663, Expect=0.0]} {Dmel: FBgn0267390, dop, drop out, [RH, Score=502, Expect=8e-149]} {Celegans: WBGene00002192, kin-4, KIN-4 protein; Protein KINase, [RH, Score=596, Expect=0.0]} {Smed: dd_Smed_v6_2028_0_1, dd_Smed_v6_2028_0_1, [Score=649, Expect=0.0]} {RNA1509_23083, RNA1509_4612, RNA1509_52145} {RNA1310_726.1, RNA1509_23083, RNA1509_4612, RNA1509_52145} {RNA1509_23083, RNA1509_4612, RNA1509_52145, RNA815_4601} |
| 12. | MligTC455_38683 | 833 | 17.35 | Mlig455_012993 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_012993 {REF} {Length: 2594} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57935} {RNA1310_16719} {RNA815_22067.1} |
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