TomoSeq data search

Data search

Results for MligTC455_33016

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33016	46	0.96	Mlig455_030897	Neo: - Age: -	UTP20	Mlig455_030897 {REF} {Length: 9860} {TRANSSPLICED} {Pfam: Down-regulated in metastasis [PF07539.14, score=169.0]} {Human: ENSG00000120800, UTP20, UTP20, small subunit processome component, [Score=269, Expect=3e-71]} {Mouse: ENSMUSG00000004356, Utp20, UTP20 small subunit processome component, [RH, Score=271, Expect=3e-72]} {Dmel: FBgn0034734, CG4554, [RH, Score=181, Expect=6e-45]} {Celegans: WBGene00007050, utp-20, UTP small subunit (SSU) processome component homolog, [RH, Score=167, Expect=7e-41]} {Smed: dd_Smed_v6_5777_0_1, dd_Smed_v6_5777_0_1, [Score=130, Expect=1e-29]} {RNA1509_30314} {RNA1310_332, RNA1509_30314} {RNA1509_30314, RNA815_127.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_33016

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.196	1.21	0.99975	1.00000
RegionR2	1.202	1.21	0.55529	0.91923
RegionR3	1.746	1.21	0.37905	0.91181
RegionR4	2.277	1.21	0.29579	0.60752
RegionR5	1.047	1.21	0.45622	0.81848
RegionR6	-1.697	1.21	0.99983	1.00000
RegionR7	-1.726	1.21	0.99977	1.00000
RegionR8	-1.653	1.21	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.39	1.21	0.99984	1.00000
RegenerationR2	0.938	1.21	0.71047	0.96014
RegenerationR3	0.732	1.21	0.81557	0.98630
RegenerationR4	1.414	1.21	0.68958	0.94900
RegenerationR5	1.195	1.21	0.71919	0.95909
RegenerationR6	4.623	1.21	0.13278	0.44740
RegenerationBL	5.369	1.21	0.04052	0.22845
RegenerationTP	2.426	1.21	0.47301	0.88281

Genes with expression patterns similar to MligTC455_33016

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33016	46	0.96	Mlig455_030897	Neo: - Age: -	UTP20	3	-	-	1.000	-	1.000	1.000	Mlig455_030897 {REF} {Length: 9860} {TRANSSPLICED} {Pfam: Down-regulated in metastasis [PF07539.14, score=169.0]} {Human: ENSG00000120800, UTP20, UTP20, small subunit processome component, [Score=269, Expect=3e-71]} {Mouse: ENSMUSG00000004356, Utp20, UTP20 small subunit processome component, [RH, Score=271, Expect=3e-72]} {Dmel: FBgn0034734, CG4554, [RH, Score=181, Expect=6e-45]} {Celegans: WBGene00007050, utp-20, UTP small subunit (SSU) processome component homolog, [RH, Score=167, Expect=7e-41]} {Smed: dd_Smed_v6_5777_0_1, dd_Smed_v6_5777_0_1, [Score=130, Expect=1e-29]} {RNA1509_30314} {RNA1310_332, RNA1509_30314} {RNA1509_30314, RNA815_127.1}
2.	MligTC455_29151	72	1.49	Mlig455_034331	Neo: - Age: -		1.808	-	-	0.985	-	-	0.823	Mlig455_034331 {REF} {Length: 6176} {RNA1509_833} {RNA1310_22564} {RNA815_16197}
3.	MligTC455_07711	15	0.31	Mlig455_035975	Neo: - Age: -		1.704	-	-	0.974	-	0.730	-	Mlig455_035975 {REF} {Length: 476} {NoTransDecoderORF} {RNA1509_35506} {RNA1310_3152.3} {RNA815_24414}
4.	MligTC455_22201	892	18.59	Mlig455_045089	Neo: - Age: - Region-enriched R7: 1.426/0.02956 Regeneration-upregulated BL: 1.589 Regeneration-enriched BL: 1.589	TLL1	1.702	-	-	-	-	0.745	0.957	Mlig455_045089 {REF} {Length: 3960} {Pfam: CUB domain [PF00431.22, score=500.8]; Astacin (Peptidase family M12A) [PF01400.26, score=226.0]; Coagulation Factor Xa inhibitory site [PF14670.8, score=57.7]; Calcium-binding EGF domain [PF07645.17, score=41.2]; Complement Clr-like EGF-like [PF12662.9, score=32.2]; EGF domain [PF12947.9, score=24.5]; CUB-like domain [PF02408.22, score=24.0]; Human growth factor-like EGF [PF12661.9, score=21.4]; EGF-like domain [PF00008.29, score=20.3]} {Human: ENSG00000038295, TLL1, tolloid like 1, [RH, Score=877, Expect=0.0]; ENSG00000095587, TLL2, tolloid like 2, [RH, Score=876, Expect=0.0]; ENSG00000168487, BMP1, bone morphogenetic protein 1, [RH, Score=865, Expect=0.0]} {Mouse: ENSMUSG00000025013, Tll2, tolloid-like 2, [RH, Score=881, Expect=0.0]; ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [RH, Score=867, Expect=0.0]; ENSMUSG00000053626, Tll1, tolloid-like, [RH, Score=863, Expect=0.0]} {Dmel: FBgn0004885, tok, tolkin, [RH, Score=864, Expect=0.0]} {Celegans: WBGene00003555, nas-39, Zinc metalloproteinase nas-39, [RH, Score=716, Expect=0.0]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [RH, Score=888, Expect=0.0]} {RNA1509_7883} {RNA1310_2749, RNA1509_7883} {RNA1509_7883, RNA815_1455}
5.	MligTC455_12393	23	0.48	Mlig455_065564	Neo: - Age: -	SSTR5	0.995	-	-	0.995	-	-	-	Mlig455_065564 {REF} {Length: 2085} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=121.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=28.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=24.9]} {Human: ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=91.3, Expect=2e-19]; ENSG00000264717, NPY4R2, neuropeptide Y receptor Y4-2, [Score=89.4, Expect=1e-18]} {Mouse: ENSMUSG00000045052, Prlhr, prolactin releasing hormone receptor, [Score=103, Expect=8e-24]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=102, Expect=2e-23]; ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=102, Expect=3e-23]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=114, Expect=8e-27]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=7e-23]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [Score=191, Expect=5e-54]} {RNA1509_59439} {RNA1310_49826} {RNA815_38569}
6.	MligTC455_51127	32	0.66	Mlig455_054349	Neo: - Age: -	GLRA2	0.994	-	-	0.994	-	-	-	Mlig455_054349 {REF} {Length: 2070} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=108.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=317, Expect=6e-102]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=316, Expect=1e-101]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=312, Expect=3e-100]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=317, Expect=3e-102]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=316, Expect=1e-101]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=308, Expect=1e-98]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=3e-91]} {Celegans: WBGene00020767, lgc-40, Ligand-Gated ion Channel, [RH, Score=260, Expect=4e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=261, Expect=1e-80]} {RNA1310_34255} {RNA815_61641}
7.	MligTC455_01695	25	0.52	Mlig455_015208	Neo: - Age: -		0.989	-	-	0.989	-	-	-	Mlig455_015208 {REF} {Length: 605} {NoTransDecoderORF} {RNA1509_45595} {RNA1310_13430.1} {RNA815_343.1}
8.	MligTC455_27813	66	1.37	Mlig455_071014	Neo: - Age: -		0.979	-	-	0.979	-	-	-	Mlig455_071014 {REF} {Length: 2810} {RNA1509_55315} {RNA1310_683.1} {RNA815_2170.1}
9.	MligTC455_16977	41	0.86	Mlig455_006005	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_006005 {REF} {Length: 2914} {NoTransDecoderORF} {RNA1509_46050} {RNA1310_75939} {RNA815_50611}
10.	MligTC455_16866	18	0.37	Mlig455_065296	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_065296 {REF} {Length: 1827} {RNA1310_92472}
11.	MligTC455_16867	18	0.37	Mlig455_065319	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_065319 {REF} {Length: 1743} {RNA1310_92472}
12.	MligTC455_17985	100	2.08	Mlig455_011996	Neo: - Age: -		0.972	-	-	-	-	-	0.972	Mlig455_011996 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1294) [PF06961.15, score=59.4]} {RNA1509_56809} {RNA1310_44848} {RNA815_48983}
13.	MligTC455_34014	33	0.69	Mlig455_033785	Neo: - Age: -		0.972	-	-	0.972	-	-	-	Mlig455_033785 {REF} {Length: 5958} {RNA1509_56561} {RNA1310_25982} {RNA815_38909}
14.	MligTC455_40614	25	0.52	Mlig455_030882	Neo: - Age: -		0.972	-	-	0.972	-	-	-	Mlig455_030882 {REF} {Length: 1647} {RNA1509_37399} {RNA1310_18527} {RNA815_9560}
15.	MligTC455_07023	32	0.67	Mlig455_018609	Neo: - Age: -	TMEM243	0.971	-	-	-	-	-	0.971	Mlig455_018609 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2678) [PF10856.10, score=53.8]} {Human: ENSG00000135185, TMEM243, transmembrane protein 243, [RH, Score=64.7, Expect=5e-13]} {Mouse: ENSMUSG00000079659, Tmem243, transmembrane protein 243, mitochondrial, [Score=49.3, Expect=1e-07]} {RNA1509_52894} {RNA1310_40265} {RNA815_19809}
16.	MligTC455_09699	68	1.41	Mlig455_007615	Neo: - Age: -		0.968	-	-	0.968	-	-	-	Mlig455_007615 {REF} {Length: 485} {NoTransDecoderORF} {RNA1310_83381} {RNA815_43376}
17.	MligTC455_29061	287	5.98	Mlig455_061344	Neo: - Age: Up-Up-Down		0.968	-	-	0.968	-	-	-	Mlig455_061344 {REF} {Length: 4569} {RNA1509_40044} {RNA1310_6084, RNA1509_40044} {RNA1509_40044, RNA815_5170.1}
18.	MligTC455_36284	36	0.76	Mlig455_040308	Neo: - Age: -		0.968	-	-	0.968	-	-	-	Mlig455_040308 {REF} {Length: 799} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_121194} {RNA815_19856}
19.	MligTC455_45915	38	0.79	Mlig455_025387	Neo: - Age: - Region-enriched R5: 3.133/0.04924	TRAF3IP1	0.968	-	-	0.968	-	-	-	Mlig455_025387 {REF} {Length: 1590} {Pfam: Microtubule-binding protein MIP-T3 C-terminal region [PF17749.3, score=132.0]; Takusan [PF04822.15, score=19.6]} {Human: ENSG00000204104, TRAF3IP1, TRAF3 interacting protein 1, [Score=162, Expect=5e-43]} {Mouse: ENSMUSG00000034292, Traf3ip1, TRAF3 interacting protein 1, [Score=163, Expect=1e-43]} {Celegans: WBGene00001127, dyf-11, [Score=65.9, Expect=2e-11]} {Smed: dd_Smed_v6_10562_0_1, dd_Smed_v6_10562_0_1, [Score=121, Expect=1e-29]} {RNA1509_5107} {RNA1310_14186.1} {RNA815_2859}
20.	MligTC455_12384	30	0.62	Mlig455_014121, Mlig455_014129	Neo: - Age: - Regeneration-downregulated R2: -5.903 Regeneration-depleted R2: -5.903	MARK3, MARK4	0.966	-	-	0.966	-	-	-	Mlig455_014121 {REF} {Length: 3626} {Pfam: Protein kinase domain [PF00069.27, score=234.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.3]; Kinase-like [PF14531.8, score=26.9]; ABC1 atypical kinase-like domain [PF03109.18, score=21.4]; Ternary complex associated domain 9 [PF19974.1, score=18.3]} {Human: ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=219, Expect=7e-60]; ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=215, Expect=2e-58]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=212, Expect=2e-57]} {Mouse: ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=217, Expect=4e-59]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=215, Expect=1e-58]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=213, Expect=1e-57]} {Dmel: FBgn0026063, KP78b, [Score=218, Expect=1e-60]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=220, Expect=5e-59]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=414, Expect=7e-133]} {RNA1310_41210} {RNA815_38347} Mlig455_014129 {REF} {Length: 3531} {Pfam: Protein kinase domain [PF00069.27, score=107.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.2]} {Human: ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=93.2, Expect=3e-19]} {Mouse: ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=86.7, Expect=3e-17]; ENSMUSG00000009772, Nuak2, NUAK family, SNF1-like kinase, 2, [Score=84.0, Expect=2e-16]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0262103, Sik3, Salt-inducible kinase 3, [Score=87.4, Expect=2e-17]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=86.3, Expect=3e-17]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=151, Expect=1e-38]} {RNA1310_80369} {RNA815_38347}
21.	MligTC455_13669	41	0.85	Mlig455_068960	Neo: - Age: -		0.966	-	-	0.966	-	-	-	Mlig455_068960 {REF} {Length: 2108} {Pfam: ZIP Zinc transporter [PF02535.24, score=31.7]} {Celegans: WBGene00018897, zipt-2.4, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=47.8, Expect=1e-05]} {RNA1310_20142} {RNA815_47479}
22.	MligTC455_11015	19	0.4	Mlig455_010464	Neo: - Age: Up-Down-Up		0.959	-	-	0.959	-	-	-	Mlig455_010464 {REF} {Length: 1551} {RNA1310_22199.1} {RNA815_10412}
23.	MligTC455_13350	45	0.93	Mlig455_050065	Neo: - Age: - Region-enriched R2: 6.087/0.03122		0.955	-	-	0.955	-	-	-	Mlig455_050065 {REF} {Length: 558} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_35955} {RNA815_1171.1}
24.	MligTC455_26375	61	1.27	Mlig455_043758	Neo: - Age: -	SRD5A3	0.953	-	-	0.953	-	-	-	Mlig455_043758 {REF} {Length: 6631} {TRANSSPLICED} {Pfam: 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=59.0]} {Human: ENSG00000128039, SRD5A3, steroid 5 alpha-reductase 3, [RH, Score=99.0, Expect=2e-23]} {Mouse: ENSMUSG00000029233, Srd5a3, steroid 5 alpha-reductase 3, [RH, Score=93.2, Expect=2e-21]} {Dmel: FBgn0032014, CG7840, [RH, Score=104, Expect=2e-25]} {Celegans: WBGene00007102, B0024.13, Polyprenol reductase, [RH, Score=92.4, Expect=2e-21]} {RNA1509_13072} {RNA1310_4523} {RNA815_17419}
25.	MligTC455_31906	195	4.06	Mlig455_068976	Neo: - Age: Up-Up-Down		0.952	-	-	0.952	-	-	-	Mlig455_068976 {REF} {Length: 6455} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=26.5]} {RNA1509_31473} {RNA1310_5450.1} {RNA815_16253.2}