Data search
Results for MligTC455_48976
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48976 | 3958 | 82.46 | Mlig455_004420 | Neo: - Age: - Region-enriched R5: 1.033/0.00324 |
SNRPF | Mlig455_004420 {REF} {Length: 622} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=5e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=123, Expect=3e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [Score=135, Expect=4e-43]} {RNA1509_17054, RNA1509_36621} {RNA1310_37237.1, RNA1509_17054, RNA1509_36621} {RNA1509_17054, RNA1509_36621, RNA815_25270.1} |
Cumulative graph for MligTC455_48976
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.759 | 6.471 | 0.20403 | 0.84309 | |
| RegionR2 | -0.68 | 6.471 | 0.06445 | 0.30725 | |
| RegionR3 | 0.132 | 6.471 | 0.66514 | 1.00000 | |
| RegionR4 | 1.008 | 6.471 | 0.00285 | 0.02346 | |
| RegionR5 | 1.033 | 6.471 | 0.00023 | 0.00324 | |
| RegionR6 | 0.464 | 6.471 | 0.12750 | 0.64762 | |
| RegionR7 | -0.165 | 6.471 | 0.62338 | 1.00000 | |
| RegionR8 | -1.034 | 6.471 | 0.01270 | 0.21668 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.248 | 6.471 | 0.16219 | 0.90413 | |
| RegenerationR2 | 0.099 | 6.471 | 0.79282 | 0.98748 | |
| RegenerationR3 | 0.046 | 6.471 | 0.90620 | 1.00000 | |
| RegenerationR4 | -0.138 | 6.471 | 0.72398 | 0.96293 | |
| RegenerationR5 | -0.048 | 6.471 | 0.89806 | 1.00000 | |
| RegenerationR6 | 0.285 | 6.471 | 0.45061 | 0.77117 | |
| RegenerationBL | 1.044 | 6.471 | 0.00205 | 0.03675 | |
| RegenerationTP | 1.038 | 6.471 | 0.00734 | 0.14425 |
Genes with expression patterns similar to MligTC455_48976
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48976 | 3958 | 82.46 | Mlig455_004420 | Neo: - Age: - Region-enriched R5: 1.033/0.00324 |
SNRPF | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004420 {REF} {Length: 622} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=5e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=123, Expect=3e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [Score=135, Expect=4e-43]} {RNA1509_17054, RNA1509_36621} {RNA1310_37237.1, RNA1509_17054, RNA1509_36621} {RNA1509_17054, RNA1509_36621, RNA815_25270.1} |
| 2. | MligTC455_48977 | 4051 | 84.39 | Mlig455_037261 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.540 Region-enriched R5: 1.037/0.00266 |
SNRPF | 5.939 | 0.996 | 0.998 | 0.997 | 0.999 | 0.999 | 0.950 | Mlig455_037261 {REF} {Length: 790} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=6e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=122, Expect=6e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [RH, Score=136, Expect=1e-43]} {RNA1509_17908, RNA1509_9741} {RNA1310_69914, RNA1509_17908, RNA1509_9741} {RNA1509_17908, RNA1509_9741, RNA815_25270.1} |
| 3. | MligTC455_30219 | 2171 | 45.24 | Mlig455_024942, Mlig455_036959, Mlig455_051025 | Neo: - Age: Down-Up-Down |
1.757 | - | - | 0.804 | - | 0.953 | - | Mlig455_024942 {REF} {Length: 834} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} Mlig455_036959 {REF} {Length: 1398} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.9]} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} Mlig455_051025 {REF} {Length: 681} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_34211} {RNA815_2198.1} |
|
| 4. | MligTC455_54123 | 611 | 12.72 | Mlig455_052009 | Neo: - Age: logFC(26M/2M)=-0.288 Region-enriched R6: 2.051/0.00658 |
1.755 | - | - | - | 0.804 | 0.951 | - | Mlig455_052009 {REF} {Length: 1837} {Pfam: Tropomyosin [PF00261.22, score=75.9]; Tropomyosin like [PF12718.9, score=26.9]; Crescentin protein [PF19220.2, score=20.2]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_1790_0_1, dd_Smed_v6_1790_0_1, [Score=54.3, Expect=8e-09]} {RNA1509_20736, RNA1509_29863} {RNA1310_27668, RNA1509_29863} {RNA1509_29863, RNA815_13494} | |
| 5. | MligTC455_47023 | 707 | 14.73 | Mlig455_042180 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.256/0.00081 |
OTUB1 | 1.697 | - | 0.727 | - | - | 0.970 | - | Mlig455_042180 {REF} {Length: 1441} {TRANSSPLICED} {Pfam: Peptidase C65 Otubain [PF10275.11, score=234.7]; OTU-like cysteine protease [PF02338.21, score=21.1]} {Human: ENSG00000167770, OTUB1, OTU deubiquitinase, ubiquitin aldehyde binding 1, [RH, Score=222, Expect=1e-71]} {Mouse: ENSMUSG00000024767, Otub1, OTU domain, ubiquitin aldehyde binding 1, [RH, Score=218, Expect=2e-70]} {Dmel: FBgn0032214, CG4968, [RH, Score=207, Expect=2e-66]} {Celegans: WBGene00007718, otub-1, Ubiquitin thioesterase otubain-like, [RH, Score=146, Expect=2e-42]} {Smed: dd_Smed_v6_5846_0_1, dd_Smed_v6_5846_0_1, [RH, Score=221, Expect=1e-71]} {RNA1509_44199, RNA1509_7882} {RNA1310_20667.1, RNA1509_44199, RNA1509_7882} {RNA1509_44199, RNA1509_7882, RNA815_14803} |
| 6. | MligTC455_47022 | 591 | 12.32 | Mlig455_049547 | Neo: Int S/G2/M Age: Down-Down-Up Region-enriched R5: 2.458/0.00000 |
NUP35 | 0.974 | - | - | - | - | 0.974 | - | Mlig455_049547 {REF} {Length: 2878} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514, RNA1509_36308} {RNA1310_9308.1, RNA1509_29514, RNA1509_36308} {RNA1509_29514, RNA1509_36308, RNA815_19261} |
| 7. | MligTC455_27379 | 321 | 6.69 | Mlig455_025230 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 1.557/0.00520 |
0.966 | - | - | - | - | 0.966 | - | Mlig455_025230 {REF} {Length: 4138} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696} | |
| 8. | MligTC455_49329 | 503 | 10.48 | Mlig455_024903 | Neo: Int S/G2/M Age: Up-Down-Down |
SARNP | 0.96 | - | - | - | - | - | 0.960 | Mlig455_024903 {REF} {Length: 2528} {TRANSSPLICED} {Pfam: Tho1/MOS11 C-terminal domain [PF18592.3, score=41.2]; SAP domain [PF02037.29, score=38.8]; SAP domain-containing new25 [PF18953.2, score=27.2]} {Human: ENSG00000205323, SARNP, SAP domain containing ribonucleoprotein, [Score=51.2, Expect=6e-07]} {Mouse: ENSMUSG00000078427, Sarnp, SAP domain containing ribonucleoprotein, [Score=49.7, Expect=1e-06]; ENSMUSG00000051255, Gm6563, predicted pseudogene 6563, [Score=49.7, Expect=1e-06]} {Smed: dd_Smed_v6_2297_0_1, dd_Smed_v6_2297_0_1, [Score=68.2, Expect=5e-13]} {RNA1509_12023, RNA1509_33883, RNA1509_42001, RNA1509_57760} {RNA1310_24293, RNA1509_33883, RNA1509_42001, RNA1509_57760} {RNA1509_33883, RNA1509_42001, RNA1509_57760, RNA815_8482} |
| 9. | MligTC455_38399 | 4980 | 103.75 | Mlig455_048481 | Neo: Int S/G2/M Age: - |
VCP | 0.957 | - | - | - | - | - | 0.957 | Mlig455_048481 {REF} {Length: 3323} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=323.2]; AAA+ lid domain [PF17862.3, score=83.8]; Cell division protein 48 (CDC48), N-terminal domain [PF02359.20, score=75.5]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=52.5]; AAA ATPase domain [PF13191.8, score=50.7]; AAA domain (Cdc48 subfamily) [PF07724.16, score=43.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=41.5]; Cell division protein 48 (CDC48), domain 2 [PF02933.19, score=41.0]; AAA domain [PF13671.8, score=40.9]; Vps4 C terminal oligomerisation domain [PF09336.12, score=40.1]; AAA domain [PF13401.8, score=38.3]; TIP49 P-loop domain [PF06068.15, score=35.1]; AAA domain [PF13238.8, score=32.1]; RNA helicase [PF00910.24, score=31.2]; AAA domain [PF13173.8, score=29.7]; Magnesium chelatase, subunit ChlI [PF01078.23, score=29.0]; ABC transporter [PF00005.29, score=27.1]; IstB-like ATP binding protein [PF01695.19, score=27.1]; AAA domain [PF13521.8, score=27.0]; Parvovirus non-structural protein NS1 [PF01057.19, score=26.4]; P-loop containing dynein motor region [PF12775.9, score=26.1]; AAA domain [PF13207.8, score=25.5]; Bacterial dnaA protein [PF00308.20, score=24.8]; ATPase domain predominantly from Archaea [PF01637.20, score=24.3]; AAA domain [PF13481.8, score=23.5]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=23.1]; KaiC [PF06745.15, score=23.0]; AAA domain [PF13479.8, score=22.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=22.2]; Sigma-54 interaction domain [PF00158.28, score=22.1]; NACHT domain [PF05729.14, score=21.1]; Zeta toxin [PF06414.14, score=21.1]; Protein of unknown function (DUF815) [PF05673.15, score=20.4]; Type III restriction enzyme, res subunit [PF04851.17, score=20.2]; NB-ARC domain [PF00931.24, score=20.0]; Sigma-54 interaction domain [PF14532.8, score=19.1]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=19.0]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=18.5]} {Human: ENSG00000165280, VCP, valosin containing protein, [RH, Score=1269, Expect=0.0]} {Mouse: ENSMUSG00000028452, Vcp, valosin containing protein, [RH, Score=1269, Expect=0.0]} {Dmel: FBgn0261014, TER94, [RH, Score=1271, Expect=0.0]} {Celegans: WBGene00008053, cdc-48.2, Transitional endoplasmic reticulum ATPase homolog 2, [RH, Score=1209, Expect=0.0]} {Smed: dd_Smed_v6_482_0_1, dd_Smed_v6_482_0_1, [RH, Score=1309, Expect=0.0]} {RNA1509_11640, RNA1509_13887, RNA1509_41889, RNA1509_514, RNA1509_8519} {RNA1310_4584, RNA1509_11640, RNA1509_13887, RNA1509_41889, RNA1509_514, RNA1509_8519} {RNA1509_11640, RNA1509_13887, RNA1509_41889, RNA1509_514, RNA1509_8519, RNA815_1672.2} |
| 10. | MligTC455_18245 | 407 | 8.48 | Mlig455_002450 | Neo: - Age: logFC(26M/2M)=0.181 Region-enriched R5: 1.987/0.03575 |
ARPC1A | 0.953 | - | - | - | - | 0.953 | - | Mlig455_002450 {REF} {Length: 1977} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=49.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=43.5]} {Human: ENSG00000241685, ARPC1A, actin related protein 2/3 complex subunit 1A, [RH, Score=382, Expect=3e-131]} {Mouse: ENSMUSG00000029621, Arpc1a, actin related protein 2/3 complex, subunit 1A, [RH, Score=381, Expect=2e-131]} {Dmel: FBgn0001961, Arpc1, Actin-related protein 2/3 complex, subunit 1, [RH, Score=350, Expect=3e-119]} {Celegans: WBGene00000201, arx-3, ARp2/3 compleX component, [RH, Score=319, Expect=4e-107]} {Smed: dd_Smed_v6_978_0_1, dd_Smed_v6_978_0_1, [RH, Score=298, Expect=7e-99]} {RNA1509_1865} {RNA1310_13468} {RNA815_4973.1} |
| 11. | MligTC455_10531 | 1991 | 41.48 | Mlig455_048117 | Neo: Neoblast, stringent Age: - Regeneration-upregulated BL: 1.505 Regeneration-enriched BL: 1.505 |
ANP32B | 0.952 | - | - | - | - | - | 0.952 | Mlig455_048117 {REF} {Length: 1650} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=64.4]; Leucine-rich repeat [PF14580.8, score=53.9]; Leucine rich repeat [PF13855.8, score=40.5]; Leucine Rich repeat [PF13516.8, score=21.3]} {Human: ENSG00000136938, ANP32B, acidic nuclear phosphoprotein 32 family member B, [RH, Score=146, Expect=4e-42]; ENSG00000143401, ANP32E, acidic nuclear phosphoprotein 32 family member E, [RH, Score=143, Expect=1e-40]; ENSG00000140350, ANP32A, acidic nuclear phosphoprotein 32 family member A, [RH, Score=139, Expect=3e-39]} {Mouse: ENSMUSG00000028333, Anp32b, acidic (leucine-rich) nuclear phosphoprotein 32 family, member B, [RH, Score=150, Expect=2e-43]} {Dmel: FBgn0034282, Mapmodulin, [RH, Score=187, Expect=4e-58]} {Celegans: WBGene00009367, F33H2.3, Acidic leucine-rich nuclear phosphoprotein 32-related protein 1, [RH, Score=95.1, Expect=3e-23]} {Smed: dd_Smed_v6_5176_0_1, dd_Smed_v6_5176_0_1, [RH, Score=157, Expect=1e-45]} {RNA1509_21879, RNA1509_27255, RNA1509_47497, RNA1509_5598} {RNA1310_24757, RNA1509_21879, RNA1509_27255, RNA1509_47497, RNA1509_5598} {RNA1509_21879, RNA1509_27255, RNA1509_47497, RNA1509_5598, RNA815_5320} |
| 12. | MligTC455_24048 | 3092 | 64.42 | Mlig455_008833, Mlig455_008935 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.252 |
HYPK | 0.95 | - | - | - | - | 0.950 | - | Mlig455_008833 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10390, RNA1509_54479} {RNA1310_31866, RNA1509_10390, RNA1509_54479} {RNA1509_10390, RNA1509_54479, RNA815_38606} Mlig455_008935 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10375, RNA1509_10390} {RNA1310_31866, RNA1509_10375} {RNA1509_10375, RNA815_38606} |
| 13. | MligTC455_24194 | 11878 | 247.46 | Mlig455_012113 | Neo: Int S/G2/M |
RPL8 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_012113 {REF} {Length: 944} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=154.7]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=60.1]} {Human: ENSG00000161016, RPL8, ribosomal protein L8, [RH, Score=414, Expect=7e-148]} {Mouse: ENSMUSG00000003970, Rpl8, ribosomal protein L8, [RH, Score=414, Expect=5e-148]} {Dmel: FBgn0261602, RpL8, Ribosomal protein L8, [RH, Score=410, Expect=1e-146]} {Celegans: WBGene00004413, rpl-2, 60S ribosomal protein L8, [RH, Score=395, Expect=1e-140]} {Smed: dd_Smed_v6_108_0_1, dd_Smed_v6_108_0_1, [RH, Score=399, Expect=2e-142]} {RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259} {RNA1310_38364.1, RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259} {RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259, RNA815_9295.2} |
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