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Results for MligTC455_48977

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48977 4051 84.39 Mlig455_037261

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.540

Region-enriched R5: 1.037/0.00266

 SNRPF Mlig455_037261 {REF} {Length: 790} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=6e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=122, Expect=6e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [RH, Score=136, Expect=1e-43]} {RNA1509_17908, RNA1509_9741} {RNA1310_69914, RNA1509_17908, RNA1509_9741} {RNA1509_17908, RNA1509_9741, RNA815_25270.1}

Cumulative graph for MligTC455_48977

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.781 6.489 0.18524 0.81573
RegionR2 -0.707 6.489 0.05227 0.27346
RegionR3 0.161 6.489 0.59380 1.00000
RegionR4 0.99 6.489 0.00303 0.02466
RegionR5 1.037 6.489 0.00018 0.00266
RegionR6 0.479 6.489 0.11031 0.60604
RegionR7 -0.168 6.489 0.61384 1.00000
RegionR8 -1.012 6.489 0.01303 0.22004

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.874 6.489 0.29832 0.99429
RegenerationR2 0.175 6.489 0.63830 0.93077
RegenerationR3 0.039 6.489 0.91862 1.00000
RegenerationR4 -0.133 6.489 0.73119 0.96473
RegenerationR5 -0.062 6.489 0.86680 1.00000
RegenerationR6 0.244 6.489 0.51337 0.81577
RegenerationBL 1.022 6.489 0.00228 0.03943
RegenerationTP 0.99 6.489 0.00983 0.16822


Genes with expression patterns similar to MligTC455_48977

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48977 4051 84.39 Mlig455_037261

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.540

Region-enriched R5: 1.037/0.00266

 SNRPF 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_037261 {REF} {Length: 790} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=6e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=122, Expect=6e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [RH, Score=136, Expect=1e-43]} {RNA1509_17908, RNA1509_9741} {RNA1310_69914, RNA1509_17908, RNA1509_9741} {RNA1509_17908, RNA1509_9741, RNA815_25270.1}
2. MligTC455_48976 3958 82.46 Mlig455_004420

Neo: -

Age: -

Region-enriched R5: 1.033/0.00324
Region-enriched R4: 1.008/0.02346

 SNRPF 5.939 0.996 0.998 0.997 0.999 0.999 0.950 Mlig455_004420 {REF} {Length: 622} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=5e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=123, Expect=3e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [Score=135, Expect=4e-43]} {RNA1509_17054, RNA1509_36621} {RNA1310_37237.1, RNA1509_17054, RNA1509_36621} {RNA1509_17054, RNA1509_36621, RNA815_25270.1}
3. MligTC455_30219 2171 45.24 Mlig455_024942, Mlig455_036959, Mlig455_051025

Neo: -

Age: Down-Up-Down

 1.761 - - 0.810 - 0.951 -

Mlig455_024942 {REF} {Length: 834} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1}

Mlig455_036959 {REF} {Length: 1398} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.9]} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1}

Mlig455_051025 {REF} {Length: 681} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_34211} {RNA815_2198.1}
4. MligTC455_47023 707 14.73 Mlig455_042180

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.256/0.00081

 OTUB1 1.714 - 0.742 - - 0.972 - Mlig455_042180 {REF} {Length: 1441} {TRANSSPLICED} {Pfam: Peptidase C65 Otubain [PF10275.11, score=234.7]; OTU-like cysteine protease [PF02338.21, score=21.1]} {Human: ENSG00000167770, OTUB1, OTU deubiquitinase, ubiquitin aldehyde binding 1, [RH, Score=222, Expect=1e-71]} {Mouse: ENSMUSG00000024767, Otub1, OTU domain, ubiquitin aldehyde binding 1, [RH, Score=218, Expect=2e-70]} {Dmel: FBgn0032214, CG4968, [RH, Score=207, Expect=2e-66]} {Celegans: WBGene00007718, otub-1, Ubiquitin thioesterase otubain-like, [RH, Score=146, Expect=2e-42]} {Smed: dd_Smed_v6_5846_0_1, dd_Smed_v6_5846_0_1, [RH, Score=221, Expect=1e-71]} {RNA1509_44199, RNA1509_7882} {RNA1310_20667.1, RNA1509_44199, RNA1509_7882} {RNA1509_44199, RNA1509_7882, RNA815_14803}
5. MligTC455_47022 591 12.32 Mlig455_049547

Neo: Int S/G2/M

Age: Down-Down-Up

Region-enriched R5: 2.458/0.00000

 NUP35 0.969 - - - - 0.969 - Mlig455_049547 {REF} {Length: 2878} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514, RNA1509_36308} {RNA1310_9308.1, RNA1509_29514, RNA1509_36308} {RNA1509_29514, RNA1509_36308, RNA815_19261}
6. MligTC455_27379 321 6.69 Mlig455_025230

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R5: 1.557/0.00520

 0.963 - - - - 0.963 - Mlig455_025230 {REF} {Length: 4138} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696}
7. MligTC455_36578 5214 108.63 Mlig455_043909

Neo: Int S/G2/M

Age: -

Regeneration-enriched BL: 1.402
Regeneration-enriched R6: 1.085

 PSMC6 0.954 - - - - - 0.954 Mlig455_043909 {REF} {Length: 2375} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=145.5]; AAA+ lid domain [PF17862.3, score=45.2]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=34.2]; AAA ATPase domain [PF13191.8, score=33.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.7]; AAA domain (Cdc48 subfamily) [PF07724.16, score=26.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.3]; AAA domain [PF13401.8, score=20.5]} {Human: ENSG00000100519, PSMC6, proteasome 26S subunit, ATPase 6, [RH, Score=683, Expect=0.0]} {Mouse: ENSMUSG00000021832, Psmc6, proteasome (prosome, macropain) 26S subunit, ATPase, 6, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0028685, Rpt4, Regulatory particle triple-A ATPase 4, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00004504, rpt-4, Probable 26S protease regulatory subunit 10B, [RH, Score=655, Expect=0.0]} {Smed: dd_Smed_v6_2133_0_1, dd_Smed_v6_2133_0_1, [RH, Score=697, Expect=0.0]} {RNA1509_12298, RNA1509_1468, RNA1509_15727} {RNA1310_14071, RNA1509_12298, RNA1509_1468, RNA1509_15727} {RNA1509_12298, RNA1509_1468, RNA1509_15727, RNA815_6834}
8. MligTC455_48041 684 14.26 Mlig455_015166

Neo: -

Age: Down-Up-Down

 SQSTM1 0.95 - - - - 0.950 - Mlig455_015166 {REF} {Length: 2821} {Pfam: UBA domain [PF16577.7, score=30.1]; Zinc finger, ZZ type [PF00569.19, score=27.1]; PB1 domain [PF00564.26, score=25.6]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [RH, Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=108, Expect=2e-25]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [RH, Score=59.7, Expect=3e-09]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=52.8, Expect=3e-07]} {RNA1509_49422, RNA1509_56663} {RNA1310_11564, RNA1509_56663} {RNA1509_56663, RNA815_6596}

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