Data search
Results for MligTC455_47023
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47023 | 707 | 14.73 | Mlig455_042180 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.256/0.00081 |
OTUB1 | Mlig455_042180 {REF} {Length: 1441} {TRANSSPLICED} {Pfam: Peptidase C65 Otubain [PF10275.11, score=234.7]; OTU-like cysteine protease [PF02338.21, score=21.1]} {Human: ENSG00000167770, OTUB1, OTU deubiquitinase, ubiquitin aldehyde binding 1, [RH, Score=222, Expect=1e-71]} {Mouse: ENSMUSG00000024767, Otub1, OTU domain, ubiquitin aldehyde binding 1, [RH, Score=218, Expect=2e-70]} {Dmel: FBgn0032214, CG4968, [RH, Score=207, Expect=2e-66]} {Celegans: WBGene00007718, otub-1, Ubiquitin thioesterase otubain-like, [RH, Score=146, Expect=2e-42]} {Smed: dd_Smed_v6_5846_0_1, dd_Smed_v6_5846_0_1, [RH, Score=221, Expect=1e-71]} {RNA1509_44199, RNA1509_7882} {RNA1310_20667.1, RNA1509_44199, RNA1509_7882} {RNA1509_44199, RNA1509_7882, RNA815_14803} |
Cumulative graph for MligTC455_47023
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.368 | 4.276 | 0.00532 | 0.22777 | |
| RegionR2 | 0.83 | 4.276 | 0.08347 | 0.35483 | |
| RegionR3 | 0.753 | 4.276 | 0.03849 | 0.34175 | |
| RegionR4 | -0.847 | 4.276 | 0.06703 | 0.23505 | |
| RegionR5 | 1.256 | 4.276 | 0.00004 | 0.00081 | |
| RegionR6 | 0.797 | 4.276 | 0.03174 | 0.33076 | |
| RegionR7 | -0.018 | 4.276 | 0.97613 | 1.00000 | |
| RegionR8 | 0.597 | 4.276 | 0.28355 | 0.91084 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.527 | 4.276 | 0.56648 | 1.00000 | |
| RegenerationR2 | 0.379 | 4.276 | 0.33178 | 0.76859 | |
| RegenerationR3 | 0.302 | 4.276 | 0.46932 | 0.84336 | |
| RegenerationR4 | 0.516 | 4.276 | 0.23147 | 0.67991 | |
| RegenerationR5 | -0.35 | 4.276 | 0.34141 | 0.75850 | |
| RegenerationR6 | 0.153 | 4.276 | 0.70807 | 0.92906 | |
| RegenerationBL | 0.296 | 4.276 | 0.57556 | 0.92882 | |
| RegenerationTP | 1.133 | 4.276 | 0.02688 | 0.27611 |
Genes with expression patterns similar to MligTC455_47023
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47023 | 707 | 14.73 | Mlig455_042180 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.256/0.00081 |
OTUB1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042180 {REF} {Length: 1441} {TRANSSPLICED} {Pfam: Peptidase C65 Otubain [PF10275.11, score=234.7]; OTU-like cysteine protease [PF02338.21, score=21.1]} {Human: ENSG00000167770, OTUB1, OTU deubiquitinase, ubiquitin aldehyde binding 1, [RH, Score=222, Expect=1e-71]} {Mouse: ENSMUSG00000024767, Otub1, OTU domain, ubiquitin aldehyde binding 1, [RH, Score=218, Expect=2e-70]} {Dmel: FBgn0032214, CG4968, [RH, Score=207, Expect=2e-66]} {Celegans: WBGene00007718, otub-1, Ubiquitin thioesterase otubain-like, [RH, Score=146, Expect=2e-42]} {Smed: dd_Smed_v6_5846_0_1, dd_Smed_v6_5846_0_1, [RH, Score=221, Expect=1e-71]} {RNA1509_44199, RNA1509_7882} {RNA1310_20667.1, RNA1509_44199, RNA1509_7882} {RNA1509_44199, RNA1509_7882, RNA815_14803} |
| 2. | MligTC455_48041 | 684 | 14.26 | Mlig455_015166 | Neo: - Age: Down-Up-Down |
SQSTM1 | 1.744 | - | - | - | - | 0.950 | 0.794 | Mlig455_015166 {REF} {Length: 2821} {Pfam: UBA domain [PF16577.7, score=30.1]; Zinc finger, ZZ type [PF00569.19, score=27.1]; PB1 domain [PF00564.26, score=25.6]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [RH, Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=108, Expect=2e-25]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [RH, Score=59.7, Expect=3e-09]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=52.8, Expect=3e-07]} {RNA1509_49422, RNA1509_56663} {RNA1310_11564, RNA1509_56663} {RNA1509_56663, RNA815_6596} |
| 3. | MligTC455_24048 | 3092 | 64.42 | Mlig455_008833, Mlig455_008935 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.252 |
HYPK | 1.72 | - | - | - | - | 0.957 | 0.763 | Mlig455_008833 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10390, RNA1509_54479} {RNA1310_31866, RNA1509_10390, RNA1509_54479} {RNA1509_10390, RNA1509_54479, RNA815_38606} Mlig455_008935 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: HYPK UBA domain [PF19026.2, score=51.9]} {Human: ENSG00000242028, HYPK, huntingtin interacting protein K, [RH, Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000027245, Hypk, huntingtin interacting protein K, [RH, Score=64.3, Expect=1e-13]} {Dmel: FBgn0038196, CG9922, [RH, Score=52.4, Expect=3e-09]} {RNA1509_10375, RNA1509_10390} {RNA1310_31866, RNA1509_10375} {RNA1509_10375, RNA815_38606} |
| 4. | MligTC455_48977 | 4051 | 84.39 | Mlig455_037261 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.540 Region-enriched R5: 1.037/0.00266 |
SNRPF | 1.714 | - | 0.742 | - | - | 0.972 | - | Mlig455_037261 {REF} {Length: 790} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=6e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=122, Expect=6e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [RH, Score=136, Expect=1e-43]} {RNA1509_17908, RNA1509_9741} {RNA1310_69914, RNA1509_17908, RNA1509_9741} {RNA1509_17908, RNA1509_9741, RNA815_25270.1} |
| 5. | MligTC455_48976 | 3958 | 82.46 | Mlig455_004420 | Neo: - Age: - Region-enriched R5: 1.033/0.00324 |
SNRPF | 1.697 | - | 0.727 | - | - | 0.970 | - | Mlig455_004420 {REF} {Length: 622} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=5e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=123, Expect=3e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [Score=135, Expect=4e-43]} {RNA1509_17054, RNA1509_36621} {RNA1310_37237.1, RNA1509_17054, RNA1509_36621} {RNA1509_17054, RNA1509_36621, RNA815_25270.1} |
| 6. | MligTC455_18245 | 407 | 8.48 | Mlig455_002450 | Neo: - Age: logFC(26M/2M)=0.181 Region-enriched R5: 1.987/0.03575 |
ARPC1A | 0.952 | - | - | - | - | 0.952 | - | Mlig455_002450 {REF} {Length: 1977} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=49.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=43.5]} {Human: ENSG00000241685, ARPC1A, actin related protein 2/3 complex subunit 1A, [RH, Score=382, Expect=3e-131]} {Mouse: ENSMUSG00000029621, Arpc1a, actin related protein 2/3 complex, subunit 1A, [RH, Score=381, Expect=2e-131]} {Dmel: FBgn0001961, Arpc1, Actin-related protein 2/3 complex, subunit 1, [RH, Score=350, Expect=3e-119]} {Celegans: WBGene00000201, arx-3, ARp2/3 compleX component, [RH, Score=319, Expect=4e-107]} {Smed: dd_Smed_v6_978_0_1, dd_Smed_v6_978_0_1, [RH, Score=298, Expect=7e-99]} {RNA1509_1865} {RNA1310_13468} {RNA815_4973.1} |
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