M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_51057

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51057 721 15.03 Mlig455_001327

Neo: -

Age: -

Region-enriched R4: 1.518/0.00027

 Mlig455_001327 {REF} {Length: 1262} {TRANSSPLICED} {RNA1509_27293} {RNA1310_18620.1} {RNA815_14772.1}

Cumulative graph for MligTC455_51057

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.505 4.29 0.58284 1.00000
RegionR2 -0.558 4.29 0.20739 0.57023
RegionR3 -0.013 4.29 0.97108 1.00000
RegionR4 1.518 4.29 0.00001 0.00027
RegionR5 0.687 4.29 0.01273 0.06897
RegionR6 -0.062 4.29 0.86196 1.00000
RegionR7 -0.809 4.29 0.13412 0.68872
RegionR8 -1.27 4.29 0.08081 0.53943

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.223 4.29 0.05944 0.72608
RegenerationR2 -0.201 4.29 0.59436 0.91310
RegenerationR3 0.402 4.29 0.26001 0.69434
RegenerationR4 -0.469 4.29 0.16423 0.59830
RegenerationR5 0.198 4.29 0.50375 0.86047
RegenerationR6 0.955 4.29 0.00768 0.10732
RegenerationBL 1.155 4.29 0.02503 0.17408
RegenerationTP 0.692 4.29 0.27589 0.72349


Genes with expression patterns similar to MligTC455_51057

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51057 721 15.03 Mlig455_001327

Neo: -

Age: -

Region-enriched R4: 1.518/0.00027

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_001327 {REF} {Length: 1262} {TRANSSPLICED} {RNA1509_27293} {RNA1310_18620.1} {RNA815_14772.1}
2. MligTC455_51058 1498 31.2 Mlig455_001170, Mlig455_070585

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.529/0.00001

 5.919 0.941 1.000 0.998 0.995 0.988 0.997

Mlig455_001170 {REF} {Length: 1260} {TRANSSPLICED} {RNA1509_27293, RNA1509_31536, RNA1509_40612, RNA1509_59269} {RNA1310_18620.1, RNA1509_31536, RNA1509_40612, RNA1509_59269} {RNA1509_31536, RNA1509_40612, RNA1509_59269, RNA815_14772.1}

Mlig455_070585 {REF} {Length: 1259} {TRANSSPLICED} {RNA1509_27293, RNA1509_28580} {RNA1310_18620.1, RNA1509_27293, RNA1509_28580} {RNA1509_27293, RNA1509_28580, RNA815_14772.1}
3. MligTC455_36055 401 8.34 Mlig455_034514

Neo: -

Age: logFC(26M/2M)=0.387

 2.512 - - - 0.747 0.812 0.953 Mlig455_034514 {REF} {Length: 1339} {TRANSSPLICED} {Dmel: FBgn0035335, mRpL23, mitochondrial ribosomal protein L23, [RH, Score=80.1, Expect=5e-19]} {Smed: dd_Smed_v6_2551_0_1, dd_Smed_v6_2551_0_1, [RH, Score=89.4, Expect=2e-22]} {RNA1509_15187} {RNA1310_27076.1} {RNA815_21426}
4. MligTC455_49157 326 6.8 Mlig455_030476

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.534

Region-enriched R5: 1.722/0.00056

 NTPCR 2.465 - 0.754 - 0.953 0.758 - Mlig455_030476 {REF} {Length: 684} {TRANSSPLICED} {Pfam: NTPase [PF03266.17, score=129.5]; AAA domain [PF13604.8, score=29.5]; AAA domain [PF13401.8, score=27.8]; AAA ATPase domain [PF13191.8, score=25.0]; AAA domain [PF13238.8, score=24.0]; AAA domain [PF13521.8, score=21.3]; NACHT domain [PF05729.14, score=20.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=20.3]} {Human: ENSG00000135778, NTPCR, nucleoside-triphosphatase, cancer-related, [RH, Score=115, Expect=7e-32]} {Mouse: ENSMUSG00000031851, Ntpcr, nucleoside-triphosphatase, cancer-related, [RH, Score=107, Expect=8e-29]} {Dmel: FBgn0037046, CG10581, [RH, Score=95.5, Expect=3e-24]} {RNA1509_25758} {RNA1310_37079.1} {RNA815_20458.1}
5. MligTC455_43569 435 9.06 Mlig455_028984

Neo: -

Age: -

 ASTE1 2.414 - - - 0.730 0.958 0.726 Mlig455_028984 {REF} {Length: 2681} {Pfam: XPG domain containing [PF12813.9, score=62.1]} {Human: ENSG00000034533, ASTE1, asteroid homolog 1, [Score=112, Expect=7e-25]} {Mouse: ENSMUSG00000032567, Aste1, asteroid homolog 1, [Score=111, Expect=9e-25]} {Dmel: FBgn0015905, ast, asteroid, [Score=88.6, Expect=1e-17]} {Smed: dd_Smed_v6_12690_0_1, dd_Smed_v6_12690_0_1, [Score=141, Expect=6e-35]} {RNA1509_49240} {RNA1310_10993.1} {RNA815_4468.1}
6. MligTC455_42859 2083 43.39 Mlig455_008722

Neo: Int S/G2/M

Age: Down-Up-Up

 MRPL4 2.392 - - - 0.726 0.713 0.953 Mlig455_008722 {REF} {Length: 1235} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=113.5]} {Human: ENSG00000105364, MRPL4, mitochondrial ribosomal protein L4, [RH, Score=176, Expect=2e-52]} {Mouse: ENSMUSG00000003299, Mrpl4, mitochondrial ribosomal protein L4, [RH, Score=178, Expect=2e-53]} {Dmel: FBgn0001995, mRpL4, mitochondrial ribosomal protein L4, [RH, Score=207, Expect=7e-65]} {Celegans: WBGene00020717, mrpl-4, Mitochondrial Ribosomal Protein, Large, [RH, Score=177, Expect=4e-53]} {Smed: dd_Smed_v6_4353_0_1, dd_Smed_v6_4353_0_1, [RH, Score=243, Expect=9e-79]} {RNA1509_15601} {RNA1310_28032, RNA1509_15601} {RNA1509_15601, RNA815_15145}
7. MligTC455_46156 2072 43.17 Mlig455_040530

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.075/0.00657
Region-enriched R5: 1.062/0.00040

 MAGOHB 1.795 - - - 0.844 - 0.951 Mlig455_040530 {REF} {Length: 774} {TRANSSPLICED} {Pfam: Mago nashi protein [PF02792.16, score=247.2]} {Human: ENSG00000111196, MAGOHB, mago homolog B, exon junction complex subunit, [RH, Score=246, Expect=8e-85]; ENSG00000162385, MAGOH, mago homolog, exon junction complex subunit, [RH, Score=244, Expect=3e-84]} {Mouse: ENSMUSG00000030188, Magohb, mago homolog B, exon junction complex core component, [RH, Score=245, Expect=2e-84]; ENSMUSG00000028609, Magoh, mago homolog, exon junction complex core component, [RH, Score=244, Expect=2e-84]} {Dmel: FBgn0002736, mago, mago nashi, [RH, Score=247, Expect=1e-85]} {Celegans: WBGene00003123, mag-1, Protein mago nashi homolog, [RH, Score=251, Expect=6e-87]} {Smed: dd_Smed_v6_1217_0_1, dd_Smed_v6_1217_0_1, [RH, Score=238, Expect=4e-82]} {RNA1509_10998, RNA1509_31089, RNA1509_4519} {RNA1310_43868, RNA1509_10998, RNA1509_31089, RNA1509_4519} {RNA1509_10998, RNA1509_31089, RNA1509_4519, RNA815_22688}
8. MligTC455_44586 1241 25.84 Mlig455_013329

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.029/0.00034

 ILF2 1.782 - - - 0.832 - 0.950 Mlig455_013329 {REF} {Length: 2132} {Pfam: DZF domain [PF07528.16, score=282.5]} {Human: ENSG00000143621, ILF2, interleukin enhancer binding factor 2, [RH, Score=400, Expect=1e-137]} {Mouse: ENSMUSG00000001016, Ilf2, interleukin enhancer binding factor 2, [RH, Score=400, Expect=8e-138]} {Dmel: FBgn0038046, CG5641, [RH, Score=387, Expect=2e-132]} {Celegans: WBGene00011253, R11H6.5, [RH, Score=155, Expect=4e-43]} {Smed: dd_Smed_v6_3548_0_1, dd_Smed_v6_3548_0_1, [RH, Score=401, Expect=4e-138]} {RNA1509_14247, RNA1509_57323} {RNA1310_13620.1, RNA1509_14247, RNA1509_57323} {RNA1509_14247, RNA1509_57323, RNA815_6092}
9. MligTC455_45400 7092 147.75 Mlig455_045301

Neo: -

Age: -

Region-enriched R4: 1.238/0.00025

 ATP5MC2 1.782 - - - 0.958 - 0.824 Mlig455_045301 {REF} {Length: 761} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=42.4]} {Human: ENSG00000135390, ATP5MC2, ATP synthase membrane subunit c locus 2, [RH, Score=149, Expect=6e-47]; ENSG00000154518, ATP5MC3, ATP synthase membrane subunit c locus 3, [RH, Score=147, Expect=3e-46]; ENSG00000159199, ATP5MC1, ATP synthase membrane subunit c locus 1, [RH, Score=144, Expect=1e-45]} {Mouse: ENSMUSG00000062683, Atp5g2, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9), [RH, Score=148, Expect=1e-46]; ENSMUSG00000006057, Atp5g1, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9), [RH, Score=145, Expect=8e-46]; ENSMUSG00000018770, Atp5g3, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9), [RH, Score=144, Expect=3e-45]} {Dmel: FBgn0039830, ATPsynC, ATP synthase, subunit C, [RH, Score=147, Expect=6e-47]} {Celegans: WBGene00022336, Y82E9BR.3, ATP synthase lipid-binding protein, mitochondrial, [RH, Score=147, Expect=3e-47]} {Smed: dd_Smed_v6_401_0_1, dd_Smed_v6_401_0_1, [RH, Score=116, Expect=5e-35]} {RNA1509_19007, RNA1509_5062, RNA1509_9141, RNA1509_9927} {RNA1310_47172, RNA1509_19007, RNA1509_5062, RNA1509_9141, RNA1509_9927} {RNA1509_19007, RNA1509_5062, RNA1509_9141, RNA1509_9927, RNA815_24420}
10. MligTC455_40273 3609 75.19 Mlig455_019364

Neo: -

Age: logFC(26M/2M)=0.159

 ACADVL 1.754 - - - 0.953 - 0.801 Mlig455_019364 {REF} {Length: 2348} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=135.5]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=81.9]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=79.1]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=42.9]} {Human: ENSG00000072778, ACADVL, acyl-CoA dehydrogenase very long chain, [RH, Score=681, Expect=0.0]} {Mouse: ENSMUSG00000018574, Acadvl, acyl-Coenzyme A dehydrogenase, very long chain, [RH, Score=672, Expect=0.0]} {Dmel: FBgn0034432, CG7461, [RH, Score=635, Expect=0.0]} {Celegans: WBGene00017125, acdh-12, Acyl CoA DeHydrogenase, [RH, Score=587, Expect=0.0]} {Smed: dd_Smed_v6_2663_0_1, dd_Smed_v6_2663_0_1, [RH, Score=653, Expect=0.0]} {RNA1509_1423} {RNA1310_8126.1} {RNA815_2564.1}
11. MligTC455_46267 490 10.21 Mlig455_063389

Neo: Germline

Age: -

Region-enriched R4: 2.172/0.00017
Region-enriched R5: 1.766/0.00045

 1.694 0.960 - 0.734 - - - Mlig455_063389 {REF} {Length: 2418} {TRANSSPLICED} {RNA1509_17075} {RNA1310_23629, RNA1509_17075} {RNA1509_17075, RNA815_12436.1}
12. MligTC455_18852 3800 79.16 Mlig455_003950, Mlig455_005977

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.873/0.00000
Region-enriched R4: 1.365/0.00002

 MRPL45 0.968 - - - - - 0.968

Mlig455_003950 {REF} {Length: 1105} {TRANSSPLICED} {Human: ENSG00000278845, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]; ENSG00000277936, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]} {Mouse: ENSMUSG00000018882, Mrpl45, mitochondrial ribosomal protein L45, [RH, Score=57.8, Expect=4e-09]} {Dmel: FBgn0263863, mRpL45, mitochondrial ribosomal protein L45, [RH, Score=73.9, Expect=1e-14]} {Celegans: WBGene00022493, mrpl-45, Probable 39S ribosomal protein L45, mitochondrial, [RH, Score=75.1, Expect=3e-15]} {Smed: dd_Smed_v6_2740_0_1, dd_Smed_v6_2740_0_1, [RH, Score=64.3, Expect=8e-12]} {RNA1509_16114} {RNA1310_30839} {RNA815_14208}

Mlig455_005977 {REF} {Length: 1105} {TRANSSPLICED} {Human: ENSG00000277936, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]; ENSG00000278845, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]} {Mouse: ENSMUSG00000018882, Mrpl45, mitochondrial ribosomal protein L45, [RH, Score=57.8, Expect=3e-09]} {Dmel: FBgn0263863, mRpL45, mitochondrial ribosomal protein L45, [RH, Score=73.2, Expect=2e-14]} {Celegans: WBGene00022493, mrpl-45, Probable 39S ribosomal protein L45, mitochondrial, [RH, Score=75.5, Expect=3e-15]} {Smed: dd_Smed_v6_2740_0_1, dd_Smed_v6_2740_0_1, [RH, Score=65.9, Expect=2e-12]} {RNA1509_16114} {RNA1310_30839} {RNA815_14208}
13. MligTC455_53624 1813 37.76 Mlig455_008467, Mlig455_009918

Neo: -

Age: logFC(26M/2M)=0.449

Region-enriched R5: 1.585/0.00006
Region-enriched R4: 1.345/0.01281

 0.967 - - - - - 0.967

Mlig455_008467 {REF} {Length: 838} {TRANSSPLICED} {Pfam: 3' exoribonuclease family, domain 1 [PF01138.23, score=32.5]} {RNA1509_17896} {RNA1310_42888.1} {RNA815_22192}

Mlig455_009918 {REF} {Length: 840} {TRANSSPLICED} {Pfam: 3' exoribonuclease family, domain 1 [PF01138.23, score=32.5]} {RNA1509_17896} {RNA1310_42888.1, RNA1509_17896} {RNA1509_17896, RNA815_22192}
14. MligTC455_35650 2002 41.7 Mlig455_046752

Neo: -

Age: -

 CALR 0.966 - - - - 0.966 - Mlig455_046752 {REF} {Length: 1713} {Pfam: Calreticulin family [PF00262.20, score=28.8]} {Human: ENSG00000179218, CALR, calreticulin, [Score=98.2, Expect=1e-25]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [Score=87.0, Expect=6e-20]} {Dmel: FBgn0005585, Calr, Calreticulin, [Score=102, Expect=8e-26]} {Celegans: WBGene00000802, crt-1, Calreticulin, [Score=79.7, Expect=1e-17]} {Smed: dd_Smed_v6_220_0_4, dd_Smed_v6_220_0_4, [Score=115, Expect=1e-30]} {RNA1509_1668} {RNA1310_7869} {RNA815_3522.1}
15. MligTC455_42084 1828 38.07 Mlig455_001444

Neo: Int S/G2/M

Age: -

 ETF1 0.964 - - - - 0.964 - Mlig455_001444 {REF} {Length: 3397} {TRANSSPLICED} {Pfam: eRF1 domain 2 [PF03464.17, score=158.3]; eRF1 domain 3 [PF03465.17, score=129.0]; eRF1 domain 1 [PF03463.17, score=51.5]; Bacterial archaeo-eukaryotic release factor family 10 [PF18854.3, score=34.5]; Actinobacteria/chloroflexi VLRF1 release factor [PF18859.3, score=32.8]} {Human: ENSG00000120705, ETF1, eukaryotic translation termination factor 1, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000024360, Etf1, eukaryotic translation termination factor 1, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0036974, eRF1, eukaryotic translation release factor 1, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00020269, erfa-1, Eukaryotic peptide chain release factor subunit 1, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_5017_0_1, dd_Smed_v6_5017_0_1, [RH, Score=673, Expect=0.0]} {RNA1509_1928, RNA1509_30112} {RNA1310_2584.2, RNA1509_1928, RNA1509_30112} {RNA1509_1928, RNA1509_30112, RNA815_1129.1}
16. MligTC455_26675 366 7.62 Mlig455_053857

Neo: -

Age: Up-Down-Up

 NR1I2 0.961 - - - - 0.961 - Mlig455_053857 {REF} {Length: 4215} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=78.8]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=118, Expect=8e-29]; ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=115, Expect=2e-27]} {Mouse: ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=113, Expect=5e-27]; ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=110, Expect=8e-26]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=120, Expect=9e-29]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=124, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=117, Expect=2e-28]} {RNA1509_34134} {RNA1310_13527} {RNA815_6207}
17. MligTC455_28348 253 5.27 Mlig455_062624

Neo: -

Age: -

Region-enriched R4: 2.660/0.00291

 0.96 - - - - 0.960 - Mlig455_062624 {REF} {Length: 3425} {TRANSSPLICED} {RNA1509_26302} {RNA1310_7764} {RNA815_10526}
18. MligTC455_17574 150 3.12 Mlig455_068350

Neo: -

Age: Down-Up-Down

 0.959 - - - - - 0.959 Mlig455_068350 {REF} {Length: 353} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_37276} {RNA1310_21851} {RNA815_12138.1}
19. MligTC455_18851 1893 39.44 Mlig455_003970

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.269

Region-enriched R5: 1.923/0.00000
Region-enriched R4: 1.440/0.00007

 MRPL45 0.959 - - - - - 0.959 Mlig455_003970 {REF} {Length: 1106} {TRANSSPLICED} {Human: ENSG00000277936, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]; ENSG00000278845, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]} {Mouse: ENSMUSG00000018882, Mrpl45, mitochondrial ribosomal protein L45, [RH, Score=57.8, Expect=3e-09]} {Dmel: FBgn0263863, mRpL45, mitochondrial ribosomal protein L45, [RH, Score=74.3, Expect=9e-15]} {Celegans: WBGene00022493, mrpl-45, Probable 39S ribosomal protein L45, mitochondrial, [RH, Score=75.1, Expect=3e-15]} {Smed: dd_Smed_v6_2740_0_1, dd_Smed_v6_2740_0_1, [RH, Score=64.7, Expect=6e-12]} {RNA1509_16114, RNA1509_59577, RNA1509_6788} {RNA1310_30839, RNA1509_16114, RNA1509_59577, RNA1509_6788} {RNA1509_16114, RNA1509_59577, RNA1509_6788, RNA815_14208}
20. MligTC455_49239 254 5.29 Mlig455_002495

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_002495 {REF} {Length: 1078} {NoTransDecoderORF} {RNA1509_1763} {RNA1310_14034.1} {RNA815_4894}
21. MligTC455_21857 3307 68.9 Mlig455_035872, Mlig455_035910

Neo: Int S/G2/M

Age: -

 ABCF2, AC021097.2 0.956 - - - - 0.956 -

Mlig455_035872 {REF} {Length: 6105} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=160.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=72.9]; ABC transporter [PF12848.9, score=67.4]; RecF/RecN/SMC N terminal domain [PF02463.21, score=39.7]; P-loop containing region of AAA domain [PF13555.8, score=31.5]; AAA domain [PF13521.8, score=29.4]; AAA ATPase domain [PF13191.8, score=27.2]; RsgA GTPase [PF03193.18, score=26.6]; 50S ribosome-binding GTPase [PF01926.25, score=26.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=25.8]; AAA ATPase domain [PF13175.8, score=25.5]; AAA domain [PF13238.8, score=24.9]; NACHT domain [PF05729.14, score=23.9]; AAA domain [PF13671.8, score=23.9]; AAA domain [PF13401.8, score=23.7]; AAA domain [PF13173.8, score=23.4]; AAA domain [PF13476.8, score=21.3]; NB-ARC domain [PF00931.24, score=19.7]; AAA domain [PF13514.8, score=18.5]} {Human: ENSG00000033050, ABCF2, ATP binding cassette subfamily F member 2, [RH, Score=825, Expect=0.0]; ENSG00000285292, AC021097.2, ATP binding cassette subfamily F member 2, [RH, Score=824, Expect=0.0]} {Mouse: ENSMUSG00000028953, Abcf2, ATP-binding cassette, sub-family F (GCN20), member 2, [RH, Score=823, Expect=0.0]} {Dmel: FBgn0030672, CG9281, [RH, Score=833, Expect=0.0]} {Celegans: WBGene00012097, abcf-2, ABC transporter, class F, [RH, Score=777, Expect=0.0]} {Smed: dd_Smed_v6_434_0_1, dd_Smed_v6_434_0_1, [RH, Score=895, Expect=0.0]} {RNA1509_11526, RNA1509_3583} {RNA1310_9063, RNA1509_11526, RNA1509_3583} {RNA1509_11526, RNA1509_3583, RNA815_2973}

Mlig455_035910 {REF} {Length: 2454} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=160.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=72.9]; ABC transporter [PF12848.9, score=67.4]; RecF/RecN/SMC N terminal domain [PF02463.21, score=39.8]; P-loop containing region of AAA domain [PF13555.8, score=31.5]; AAA domain [PF13521.8, score=29.4]; AAA ATPase domain [PF13191.8, score=27.3]; RsgA GTPase [PF03193.18, score=26.6]; 50S ribosome-binding GTPase [PF01926.25, score=26.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=25.8]; AAA ATPase domain [PF13175.8, score=25.7]; AAA domain [PF13238.8, score=24.9]; NACHT domain [PF05729.14, score=23.9]; AAA domain [PF13671.8, score=23.9]; AAA domain [PF13401.8, score=23.7]; AAA domain [PF13173.8, score=23.4]; AAA domain [PF13476.8, score=21.3]; NB-ARC domain [PF00931.24, score=19.7]; AAA domain [PF13514.8, score=18.3]} {Human: ENSG00000285292, AC021097.2, ATP binding cassette subfamily F member 2, [RH, Score=825, Expect=0.0]; ENSG00000033050, ABCF2, ATP binding cassette subfamily F member 2, [RH, Score=825, Expect=0.0]} {Mouse: ENSMUSG00000028953, Abcf2, ATP-binding cassette, sub-family F (GCN20), member 2, [RH, Score=824, Expect=0.0]} {Dmel: FBgn0030672, CG9281, [RH, Score=834, Expect=0.0]} {Celegans: WBGene00012097, abcf-2, ABC transporter, class F, [RH, Score=778, Expect=0.0]} {Smed: dd_Smed_v6_434_0_1, dd_Smed_v6_434_0_1, [RH, Score=896, Expect=0.0]} {RNA1509_11526} {RNA1310_9063} {RNA815_2973}
22. MligTC455_40773 169 3.51 Mlig455_029915

Neo: -

Age: Up-Up-Down

 0.955 - - - - 0.955 - Mlig455_029915 {REF} {Length: 1588} {Mouse: ENSMUSG00000095663, Gm2310, predicted gene 2310, [Score=71.6, Expect=3e-14]} {RNA1509_17717} {RNA1310_10918.1} {RNA815_53483}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA