Data search


search
Exact
Search

Results for MligTC455_52503

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52503 11 0.22 Mlig455_006602

Neo: -

Age: -

Mlig455_006602 {REF} {Length: 1452} {RNA1509_9393} {RNA1310_41685} {RNA815_52637}

Cumulative graph for MligTC455_52503

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_52503

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52503 11 0.22 Mlig455_006602

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_006602 {REF} {Length: 1452} {RNA1509_9393} {RNA1310_41685} {RNA815_52637}
2. MligTC455_53738 469 9.77 Mlig455_038341, Mlig455_038349, Mlig455_038367, Mlig455_068286

Neo: -

Age: -

0.998 - - - - 0.998 -

Mlig455_038341 {REF} {Length: 672} {RNA1310_69225} {RNA815_63432}

Mlig455_038349 {REF} {Length: 697} {RNA1310_69225} {RNA815_63432}

Mlig455_038367 {REF} {Length: 1012} {RNA1310_69225} {RNA815_63432}

Mlig455_068286 {REF} {Length: 1010} {RNA1310_69225} {RNA815_63432}
3. MligTC455_17225 6 0.12 Mlig455_039944

Neo: -

Age: -

0.994 - - - - 0.994 - Mlig455_039944 {REF} {Length: 436} {NoTransDecoderORF} {RNA1509_58333} {RNA1310_7959.1} {RNA815_41251}
4. MligTC455_07143 7 0.15 Mlig455_051063

Neo: -

Age: -

0.993 - - - - 0.993 - Mlig455_051063 {REF} {Length: 941} {NoTransDecoderORF} {RNA1509_50426} {RNA1310_4534} {RNA815_32846}
5. MligTC455_08519 2 0.04 Mlig455_015863

Neo: -

Age: -

0.993 - - - - 0.993 - Mlig455_015863 {REF} {Length: 391} {NoTransDecoderORF} {RNA1509_55882} {RNA1310_45816.1} {RNA815_34089}
6. MligTC455_12088 61 1.26 Mlig455_057931, Mlig455_057966

Neo: -

Age: -

0.993 - - - - 0.993 -

Mlig455_057931 {REF} {Length: 396} {RNA1310_75258} {RNA815_44558}

Mlig455_057966 {REF} {Length: 396} {RNA1310_75258} {RNA815_44558}
7. MligTC455_41367 7 0.15 Mlig455_011660, Mlig455_049926

Neo: -

Age: -

0.993 - - - - 0.993 -

Mlig455_011660 {REF} {Length: 139} {NoTransDecoderORF} {RNA1509_9095} {RNA1310_45029.2} {RNA815_6607}

Mlig455_049926 {REF} {Length: 139} {NoTransDecoderORF} {RNA1509_9095} {RNA1310_45029.2} {RNA815_6607}
8. MligTC455_43530 8 0.17 Mlig455_060026

Neo: -

Age: -

0.993 - - - - 0.993 - Mlig455_060026 {REF} {Length: 1282} {NoTransDecoderORF} {RNA1310_40016.2}
9. MligTC455_45387 13 0.28 Mlig455_034357

Neo: -

Age: -

0.993 - - - - 0.993 - Mlig455_034357 {REF} {Length: 1028} {NoTransDecoderORF} {RNA1310_140207}
10. MligTC455_05844 13 0.28 Mlig455_045537

Neo: -

Age: -

0.991 - - - - 0.991 - Mlig455_045537 {REF} {Length: 635} {Celegans: WBGene00019192, H12I13.3, [Score=85.5, Expect=1e-20]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=49.3, Expect=4e-08]} {RNA1509_51941} {RNA1310_3396.1} {RNA815_1342.1}
11. MligTC455_39198 13 0.26 Mlig455_008470, Mlig455_008478, Mlig455_009924

Neo: -

Age: -

0.991 - - - - 0.991 -

Mlig455_008470 {REF} {Length: 1982} {RNA1509_8399} {RNA1310_67344} {RNA815_51157}

Mlig455_008478 {REF} {Length: 1387} {RNA1509_8399} {RNA1310_67344} {RNA815_51157}

Mlig455_009924 {REF} {Length: 670} {RNA1509_8399} {RNA1310_67344} {RNA815_51157}
12. MligTC455_57429 7 0.14 Mlig455_059604

Neo: -

Age: -

0.991 - - - - 0.991 - Mlig455_059604 {REF} {Length: 315} {NoTransDecoderORF}
13. MligTC455_43866 19 0.4 Mlig455_043501

Neo: -

Age: -

0.982 - - - - 0.982 - Mlig455_043501 {REF} {Length: 3209} {NoTransDecoderORF} {RNA1509_28510} {RNA1310_44786} {RNA815_33478}
14. MligTC455_55118 7 0.14 Mlig455_034668

Neo: -

Age: -

0.982 - - - - 0.982 - Mlig455_034668 {REF} {Length: 422}
15. MligTC455_38931 5 0.1 Mlig455_016671, Mlig455_033918

Neo: -

Age: -

PRR9 0.981 - - - - 0.981 -

Mlig455_016671 {REF} {Length: 657} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.3, Expect=7e-06]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=47.0, Expect=3e-06]} {RNA1310_29514}

Mlig455_033918 {REF} {Length: 658} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=49.3, Expect=1e-07]} {RNA1310_29514}
16. MligTC455_08968 15 0.31 Mlig455_027478

Neo: -

Age: -

0.979 - - - - 0.979 - Mlig455_027478 {REF} {Length: 1103} {NoTransDecoderORF} {RNA1509_11387} {RNA1310_3923.1} {RNA815_19423}
17. MligTC455_27968 139 2.9 Mlig455_006102

Neo: -

Age: -

SYNCRIP 0.979 - - - - 0.979 - Mlig455_006102 {REF} {Length: 3069} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=86.6]; Double-stranded RNA binding motif [PF00035.28, score=67.2]; Occluded RNA-recognition motif [PF16842.7, score=20.3]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=189, Expect=7e-52]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=188, Expect=1e-51]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=223, Expect=4e-63]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=63.9, Expect=2e-10]} {Smed: dd_Smed_v6_62256_0_1, dd_Smed_v6_62256_0_1, [Score=144, Expect=4e-37]} {RNA1509_30609} {RNA1310_8624} {RNA815_8285}
18. MligTC455_37483 65 1.35 Mlig455_039434

Neo: -

Age: Down-Up-Down

Regeneration-enriched R4: 9.467
Regeneration-enriched R5: 6.027

0.978 - - - - 0.978 - Mlig455_039434 {REF} {Length: 5360} {RNA1310_7246} {RNA815_26161}
19. MligTC455_00291 4 0.08 Mlig455_041817

Neo: -

Age: -

0.977 - - - - 0.977 - Mlig455_041817 {REF} {Length: 137} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_50573} {RNA1310_17892.1}
20. MligTC455_00311 7 0.15 Mlig455_067588

Neo: -

Age: -

0.977 - - - - 0.977 - Mlig455_067588 {REF} {Length: 462}
21. MligTC455_28435 6 0.13 Mlig455_066993

Neo: -

Age: -

0.975 - - - - 0.975 - Mlig455_066993 {REF} {Length: 904} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_2938.1} {RNA815_14343.2}
22. MligTC455_00431 10 0.21 Mlig455_062910

Neo: -

Age: -

0.971 - - - - 0.971 - Mlig455_062910 {REF} {Length: 862} {RNA1509_15401} {RNA1310_104073} {RNA815_6960}
23. MligTC455_05640 9 0.19 Mlig455_023571

Neo: -

Age: -

0.971 - - - - 0.971 - Mlig455_023571 {REF} {Length: 993} {NoTransDecoderORF}
24. MligTC455_12977 13 0.27 Mlig455_005226

Neo: -

Age: -

Region-enriched R2: 10.697/0.00007

0.968 - - - - 0.968 - Mlig455_005226 {REF} {Length: 2688} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.7]} {Smed: dd_Smed_v6_47269_0_1, dd_Smed_v6_47269_0_1, [RH, Score=89.0, Expect=1e-20]} {RNA1310_108699}
25. MligTC455_36800 19 0.41 Mlig455_042163

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_042163 {REF} {Length: 4866} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=139.5]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=57.4, Expect=3e-08]} {Celegans: WBGene00016064, acd-1, [Score=51.2, Expect=1e-06]} {Smed: dd_Smed_v6_13943_0_1, dd_Smed_v6_13943_0_1, [Score=81.3, Expect=4e-16]} {RNA1509_59040} {RNA1310_26501} {RNA815_11672.2}
26. MligTC455_20910 10 0.22 Mlig455_039653

Neo: -

Age: -

0.962 - - - - 0.962 - Mlig455_039653 {REF} {Length: 1234} {RNA1509_48033} {RNA1310_47692} {RNA815_51419}
27. MligTC455_27969 203 4.24 Mlig455_055219, Mlig455_055313

Neo: -

Age: -

ADARB1 0.962 - - - - 0.962 -

Mlig455_055219 {REF} {Length: 3087} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=288.8]; Double-stranded RNA binding motif [PF00035.28, score=44.8]} {Human: ENSG00000197381, ADARB1, adenosine deaminase, RNA specific B1, [RH, Score=346, Expect=9e-110]} {Mouse: ENSMUSG00000020262, Adarb1, adenosine deaminase, RNA-specific, B1, [RH, Score=358, Expect=3e-114]} {Dmel: FBgn0026086, Adar, Adenosine deaminase acting on RNA, [RH, Score=296, Expect=2e-91]} {Celegans: WBGene00000080, adr-2, Probable double-stranded RNA-specific adenosine deaminase, [RH, Score=184, Expect=2e-51]} {Smed: dd_Smed_v6_4538_0_1, dd_Smed_v6_4538_0_1, [RH, Score=235, Expect=5e-68]} {RNA1509_57256} {RNA1310_8624} {RNA815_8285}

Mlig455_055313 {REF} {Length: 2868} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=289.4]; Double-stranded RNA binding motif [PF00035.28, score=44.8]} {Human: ENSG00000197381, ADARB1, adenosine deaminase, RNA specific B1, [RH, Score=347, Expect=5e-110]} {Mouse: ENSMUSG00000020262, Adarb1, adenosine deaminase, RNA-specific, B1, [RH, Score=356, Expect=1e-113]} {Dmel: FBgn0026086, Adar, Adenosine deaminase acting on RNA, [RH, Score=290, Expect=8e-89]} {Celegans: WBGene00000080, adr-2, Probable double-stranded RNA-specific adenosine deaminase, [RH, Score=184, Expect=3e-51]} {Smed: dd_Smed_v6_4538_0_1, dd_Smed_v6_4538_0_1, [RH, Score=236, Expect=3e-68]} {RNA1509_57256, RNA1509_57608} {RNA1310_8624, RNA1509_57256, RNA1509_57608} {RNA1509_57256, RNA1509_57608, RNA815_8285}
28. MligTC455_42559 17 0.36 Mlig455_064128

Neo: -

Age: -

0.962 - - - - 0.962 - Mlig455_064128 {REF} {Length: 1837} {Pfam: Glycine rich protein [PF12810.9, score=23.2]} {RNA1310_112308} {RNA815_32418}
29. MligTC455_36336 12 0.25 Mlig455_018830

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_018830 {REF} {Length: 1212} {NoTransDecoderORF} {RNA1509_31395} {RNA1310_37524.1} {RNA815_26316}
30. MligTC455_13603 25 0.52 Mlig455_068071

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_068071 {REF} {Length: 71} {NoTransDecoderORF} {RNA1310_36160}
31. MligTC455_40054 19 0.4 Mlig455_016329

Neo: -

Age: -

0.959 - - - - 0.959 - Mlig455_016329 {REF} {Length: 990} {NoTransDecoderORF} {RNA1310_133686}
32. MligTC455_23707 22 0.46 Mlig455_000900

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_000900 {REF} {Length: 1320} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=25.4]} {RNA1509_42704} {RNA1310_32613.1} {RNA815_12032.1}
33. MligTC455_18880 57 1.19 Mlig455_034555, Mlig455_041488

Neo: -

Age: -

0.952 - - - - 0.952 -

Mlig455_034555 {REF} {Length: 588} {Smed: dd_Smed_v6_512_0_1, dd_Smed_v6_512_0_1, [Score=41.2, Expect=3e-06]} {RNA1509_11091} {RNA1310_4937.1} {RNA815_15376}

Mlig455_041488 {REF} {Length: 714} {Pfam: Stathmin family [PF00836.21, score=25.1]} {Smed: dd_Smed_v6_512_0_2, dd_Smed_v6_512_0_2, [Score=60.1, Expect=4e-13]} {RNA1509_11091} {RNA1310_4937.1} {RNA815_15376}
34. MligTC455_10443 17 0.36 Mlig455_016163

Neo: -

Age: Up-Down-Up

0.951 - - - - 0.951 - Mlig455_016163 {REF} {Length: 2701} {RNA1310_106588}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA