Data search
Results for MligTC455_52748
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52748 | 199 | 4.15 | Mlig455_061690 | Neo: - Age: - |
SNTB1 | Mlig455_061690 {REF} {Length: 3251} {Pfam: PDZ domain [PF00595.26, score=71.2]; PH domain [PF18012.3, score=53.6]; PH domain [PF00169.31, score=39.0]; PDZ domain [PF17820.3, score=25.1]} {Human: ENSG00000172164, SNTB1, syntrophin beta 1, [RH, Score=390, Expect=5e-130]; ENSG00000168807, SNTB2, syntrophin beta 2, [RH, Score=388, Expect=2e-129]} {Mouse: ENSMUSG00000041308, Sntb2, syntrophin, basic 2, [RH, Score=389, Expect=7e-130]; ENSMUSG00000060429, Sntb1, syntrophin, basic 1, [RH, Score=380, Expect=1e-126]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [RH, Score=350, Expect=1e-113]} {Celegans: WBGene00006062, stn-1, Syntrophin-1, [RH, Score=210, Expect=3e-62]} {Smed: dd_Smed_v6_7105_0_1, dd_Smed_v6_7105_0_1, [Score=459, Expect=6e-158]} {RNA1509_18297} {RNA1310_10457} {RNA815_22317} |
Cumulative graph for MligTC455_52748
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.73 | 2.746 | 0.68435 | 1.00000 | |
| RegionR2 | 0.766 | 2.746 | 0.33324 | 0.72510 | |
| RegionR3 | 0.393 | 2.746 | 0.52378 | 1.00000 | |
| RegionR4 | -0.232 | 2.746 | 0.79203 | 1.00000 | |
| RegionR5 | 0.971 | 2.746 | 0.07284 | 0.24487 | |
| RegionR6 | 0.433 | 2.746 | 0.49965 | 1.00000 | |
| RegionR7 | -0.689 | 2.746 | 0.49790 | 1.00000 | |
| RegionR8 | -2.373 | 2.746 | 0.12942 | 0.65963 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.47 | 2.746 | 0.31764 | 1.00000 | |
| RegenerationR2 | -0.518 | 2.746 | 0.37724 | 0.80007 | |
| RegenerationR3 | -0.167 | 2.746 | 0.80441 | 0.98360 | |
| RegenerationR4 | 0.669 | 2.746 | 0.35788 | 0.78652 | |
| RegenerationR5 | 0.217 | 2.746 | 0.70312 | 0.95263 | |
| RegenerationR6 | -0.619 | 2.746 | 0.38792 | 0.72797 | |
| RegenerationBL | 0.6 | 2.746 | 0.60690 | 0.95307 | |
| RegenerationTP | 1.595 | 2.746 | 0.18071 | 0.61595 |
Genes with expression patterns similar to MligTC455_52748
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52748 | 199 | 4.15 | Mlig455_061690 | Neo: - Age: - |
SNTB1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_061690 {REF} {Length: 3251} {Pfam: PDZ domain [PF00595.26, score=71.2]; PH domain [PF18012.3, score=53.6]; PH domain [PF00169.31, score=39.0]; PDZ domain [PF17820.3, score=25.1]} {Human: ENSG00000172164, SNTB1, syntrophin beta 1, [RH, Score=390, Expect=5e-130]; ENSG00000168807, SNTB2, syntrophin beta 2, [RH, Score=388, Expect=2e-129]} {Mouse: ENSMUSG00000041308, Sntb2, syntrophin, basic 2, [RH, Score=389, Expect=7e-130]; ENSMUSG00000060429, Sntb1, syntrophin, basic 1, [RH, Score=380, Expect=1e-126]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [RH, Score=350, Expect=1e-113]} {Celegans: WBGene00006062, stn-1, Syntrophin-1, [RH, Score=210, Expect=3e-62]} {Smed: dd_Smed_v6_7105_0_1, dd_Smed_v6_7105_0_1, [Score=459, Expect=6e-158]} {RNA1509_18297} {RNA1310_10457} {RNA815_22317} |
| 2. | MligTC455_16933 | 502 | 10.45 | Mlig455_022729 | Neo: Irradiation Age: - Region-enriched R5: 1.943/0.00000 |
KIF23 | 2.576 | 0.785 | - | 0.838 | - | - | 0.953 | Mlig455_022729 {REF} {Length: 3615} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=298.5]; Arf6-interacting domain of mitotic kinesin-like protein 1 [PF16540.7, score=92.9]; Microtubule binding [PF16796.7, score=60.9]} {Human: ENSG00000137807, KIF23, kinesin family member 23, [RH, Score=428, Expect=1e-136]} {Mouse: ENSMUSG00000032254, Kif23, kinesin family member 23, [RH, Score=384, Expect=5e-119]} {Dmel: FBgn0011692, pav, pavarotti, [RH, Score=434, Expect=6e-139]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [RH, Score=377, Expect=8e-119]} {Smed: dd_Smed_v6_9585_0_1, dd_Smed_v6_9585_0_1, [RH, Score=276, Expect=9e-82]} {RNA1509_39292} {RNA1310_6447.1, RNA1509_39292} {RNA1509_39292, RNA815_8976} |
| 3. | MligTC455_45494 | 220 | 4.59 | Mlig455_033942 | Neo: - Age: - |
AFMID | 1.729 | - | - | 0.955 | - | - | 0.774 | Mlig455_033942 {REF} {Length: 3208} {TRANSSPLICED} {Pfam: alpha/beta hydrolase fold [PF07859.15, score=27.7]; Alpha/beta hydrolase family [PF12697.9, score=25.0]} {Human: ENSG00000183077, AFMID, arylformamidase, [RH, Score=105, Expect=1e-25]} {Mouse: ENSMUSG00000017718, Afmid, arylformamidase, [RH, Score=129, Expect=4e-35]} {Dmel: FBgn0031821, KFase, Kynurenine formamidase, [RH, Score=104, Expect=9e-26]} {Celegans: WBGene00017051, afmd-1, ArylForMamiDase, [RH, Score=88.2, Expect=3e-20]} {Smed: dd_Smed_v6_12523_0_1, dd_Smed_v6_12523_0_1, [RH, Score=120, Expect=4e-32]} {RNA1509_21968, RNA1509_42924, RNA1509_59628} {RNA1310_33850.2, RNA1509_21968, RNA1509_42924, RNA1509_59628} {RNA1509_21968, RNA1509_42924, RNA1509_59628, RNA815_6864.1} |
| 4. | MligTC455_30078 | 422 | 8.8 | Mlig455_035919 | Neo: - Age: - |
SEMA3E | 1.661 | - | - | 0.958 | - | - | 0.703 | Mlig455_035919 {REF} {Length: 4961} {TRANSSPLICED} {Pfam: Sema domain [PF01403.21, score=72.0]} {Human: ENSG00000170381, SEMA3E, semaphorin 3E, [Score=77.4, Expect=5e-14]; ENSG00000187764, SEMA4D, semaphorin 4D, [Score=75.1, Expect=3e-13]} {Mouse: ENSMUSG00000063531, Sema3e, sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E, [Score=75.9, Expect=1e-13]} {Celegans: WBGene00004890, smp-2, SeMaPhorin related, [Score=52.8, Expect=9e-07]} {Smed: dd_Smed_v6_12018_0_1, dd_Smed_v6_12018_0_1, [RH, Score=52.4, Expect=8e-07]} {RNA1310_11198} {RNA815_5413} |
| 5. | MligTC455_45713 | 66 | 1.38 | Mlig455_039432 | Neo: - Age: Up-Down-Up |
0.972 | - | - | - | - | - | 0.972 | Mlig455_039432 {REF} {Length: 2393} {TRANSSPLICED} {RNA1509_58805} {RNA1310_59132} {RNA815_31237} | |
| 6. | MligTC455_36982 | 50 | 1.04 | Mlig455_043216, Mlig455_050309, Mlig455_050323 | Neo: - Age: Up-Down-Up Region-enriched R5: 2.762/0.03145 |
ASIC5 | 0.968 | - | - | 0.968 | - | - | - | Mlig455_043216 {REF} {Length: 1744} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.6]} {RNA1310_74896.2} {RNA815_61773} Mlig455_050309 {REF} {Length: 1910} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=93.5]; Kringle domain [PF00051.20, score=20.7]} {RNA1310_19910} {RNA815_51153} Mlig455_050323 {REF} {Length: 3233} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=158.8]; Kringle domain [PF00051.20, score=20.7]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=57.8, Expect=7e-08]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=50.8, Expect=6e-06]} {Smed: dd_Smed_v6_16557_0_1, dd_Smed_v6_16557_0_1, [Score=54.3, Expect=2e-07]} {RNA1310_9846.1} {RNA815_21595} |
| 7. | MligTC455_16506 | 268 | 5.58 | Mlig455_067074 | Neo: - |
SERINC3 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_067074 {REF} {Length: 2761} {TRANSSPLICED} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=489.4]} {Human: ENSG00000132824, SERINC3, serine incorporator 3, [RH, Score=400, Expect=9e-136]} {Mouse: ENSMUSG00000017707, Serinc3, serine incorporator 3, [RH, Score=353, Expect=1e-117]} {Dmel: FBgn0028399, TMS1, [Score=319, Expect=2e-104]} {Celegans: WBGene00021956, Y57E12AL.1, [Score=346, Expect=3e-115]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [Score=460, Expect=1e-159]} {RNA1509_12228} {RNA1310_17866, RNA1509_12228} {RNA1509_12228, RNA815_3387.1} |
| 8. | MligTC455_04366 | 654 | 13.63 | Mlig455_052829 | Neo: - Age: - |
UPF2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1} |
| 9. | MligTC455_41424 | 181 | 3.77 | Mlig455_018196 | Neo: - Age: - |
BBS4 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_018196 {REF} {Length: 2934} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=132.0]; Tetratricopeptide repeat [PF00515.30, score=117.7]; Tetratricopeptide repeat [PF13181.8, score=99.9]; TPR repeat [PF13414.8, score=73.7]; Tetratricopeptide repeat [PF14559.8, score=56.0]; Tetratricopeptide repeat [PF13432.8, score=55.0]; Tetratricopeptide repeat [PF13371.8, score=54.8]; Tetratricopeptide repeat [PF13428.8, score=50.2]; Tetratricopeptide repeat [PF13424.8, score=50.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=49.8]; Tetratricopeptide repeat [PF13176.8, score=46.4]; Tetratricopeptide repeat [PF13431.8, score=40.4]; Tetratricopeptide repeat [PF13174.8, score=33.5]; Coatomer epsilon subunit [PF04733.16, score=22.6]; Bacterial type III secretion protein (HrpB1_HrpK) [PF09613.12, score=18.8]} {Human: ENSG00000140463, BBS4, Bardet-Biedl syndrome 4, [RH, Score=496, Expect=6e-171]} {Mouse: ENSMUSG00000025235, Bbs4, Bardet-Biedl syndrome 4 (human), [RH, Score=492, Expect=1e-169]} {Dmel: FBgn0033578, BBS4, Bardet-Biedl syndrome 4, [RH, Score=252, Expect=5e-77]} {Celegans: WBGene00043992, bbs-4, Bardet-Biedl syndrome 4 protein homolog, [RH, Score=207, Expect=2e-60]} {Smed: dd_Smed_v6_11370_0_1, dd_Smed_v6_11370_0_1, [RH, Score=446, Expect=3e-152]} {RNA1509_10669, RNA1509_53697, RNA1509_59346} {RNA1310_19623.1, RNA1509_53697, RNA1509_59346} {RNA1509_53697, RNA1509_59346, RNA815_1541.1} |
| 10. | MligTC455_25744 | 405 | 8.44 | Mlig455_043982 | Neo: - Age: Down-Up-Down |
ZNF148 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_043982 {REF} {Length: 2987} {Pfam: C2H2-type zinc finger [PF13894.8, score=30.6]; Zinc-finger double domain [PF13465.8, score=28.3]; Zinc finger, C2H2 type [PF00096.28, score=26.6]} {Human: ENSG00000163848, ZNF148, zinc finger protein 148, [Score=65.1, Expect=9e-11]; ENSG00000197714, ZNF460, zinc finger protein 460, [Score=62.8, Expect=4e-10]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=62.4, Expect=8e-10]} {Mouse: ENSMUSG00000022811, Zfp148, zinc finger protein 148, [Score=65.1, Expect=7e-11]; ENSMUSG00000074406, Zfp628, zinc finger protein 628, [Score=62.0, Expect=6e-10]} {Dmel: FBgn0002521, pho, pleiohomeotic, [Score=60.1, Expect=1e-09]} {Celegans: WBGene00043705, egrh-2, EGR (Early Growth factor Response factor) Homolog, [Score=58.2, Expect=2e-10]} {Smed: dd_Smed_v6_6684_0_1, dd_Smed_v6_6684_0_1, [Score=59.7, Expect=1e-09]} {RNA1509_10912} {RNA1310_6828} {RNA815_16823} |
| 11. | MligTC455_24191 | 167 | 3.47 | Mlig455_036990 | Neo: - Age: logFC(26M/2M)=0.434 Region-enriched R5: 2.098/0.03929 |
GCKR | 0.952 | - | - | - | - | 0.952 | - | Mlig455_036990 {REF} {Length: 3658} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=29.6]} {Human: ENSG00000084734, GCKR, glucokinase regulator, [RH, Score=150, Expect=6e-37]} {Mouse: ENSMUSG00000059434, Gckr, glucokinase regulatory protein, [RH, Score=146, Expect=7e-36]} {Dmel: FBgn0259789, zld, zelda, [Score=54.7, Expect=6e-07]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_5558_0_1, dd_Smed_v6_5558_0_1, [RH, Score=75.5, Expect=3e-14]} {RNA1509_51386} {RNA1310_15402} {RNA815_4323.1} |
| 12. | MligTC455_02742 | 103 | 2.15 | Mlig455_020694, Mlig455_020762 | Neo: - Age: Down-Up-Down |
0.951 | - | - | 0.951 | - | - | - | Mlig455_020694 {REF} {Length: 1197} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.0]; Prokaryotic RING finger family 4 [PF14447.8, score=21.1]} {RNA1310_61039} Mlig455_020762 {REF} {Length: 1489} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.0]; Prokaryotic RING finger family 4 [PF14447.8, score=21.1]} {RNA1509_2215} {RNA1310_61039} {RNA815_6756.1} |
|
| 13. | MligTC455_22540 | 77 | 1.61 | Mlig455_022779 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_022779 {REF} {Length: 1529} {RNA1509_49656} {RNA1310_38953} {RNA815_37820} |
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